##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936444.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 658670 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.108225666874155 33.0 31.0 34.0 30.0 34.0 2 32.13012282326506 33.0 31.0 34.0 30.0 34.0 3 32.18293986366466 34.0 31.0 34.0 30.0 34.0 4 35.83695780891797 37.0 35.0 37.0 35.0 37.0 5 34.88062155555893 37.0 35.0 37.0 33.0 37.0 6 35.38422275190915 37.0 35.0 37.0 33.0 37.0 7 35.95234032216436 37.0 35.0 37.0 35.0 37.0 8 35.944186011204394 37.0 35.0 37.0 35.0 37.0 9 37.80259462249685 39.0 38.0 39.0 35.0 39.0 10 37.468021922965974 39.0 37.0 39.0 35.0 39.0 11 37.389357341309 39.0 37.0 39.0 35.0 39.0 12 37.320242306466064 39.0 37.0 39.0 35.0 39.0 13 37.261161127727085 39.0 37.0 39.0 34.0 39.0 14 38.39548180424188 40.0 38.0 41.0 34.0 41.0 15 38.531256926837415 40.0 38.0 41.0 34.0 41.0 16 38.51713908330424 40.0 38.0 41.0 34.0 41.0 17 38.532219472573516 40.0 38.0 41.0 35.0 41.0 18 38.50169280519835 40.0 38.0 41.0 35.0 41.0 19 38.42962333186573 40.0 37.0 41.0 34.0 41.0 20 38.43626246830735 40.0 37.0 41.0 34.0 41.0 21 38.343381359406074 40.0 37.0 41.0 34.0 41.0 22 38.38198946361607 40.0 37.0 41.0 34.0 41.0 23 38.39034873305297 40.0 37.0 41.0 34.0 41.0 24 38.36022742799884 40.0 37.0 41.0 34.0 41.0 25 38.21315529779707 40.0 37.0 41.0 34.0 41.0 26 38.21776306800067 40.0 37.0 41.0 34.0 41.0 27 38.22251810466546 40.0 37.0 41.0 34.0 41.0 28 38.13682876098805 40.0 37.0 41.0 34.0 41.0 29 38.11546905126998 40.0 37.0 41.0 34.0 41.0 30 38.019205368393884 40.0 37.0 41.0 34.0 41.0 31 37.97163374679278 40.0 37.0 41.0 34.0 41.0 32 37.902665978411044 40.0 36.0 41.0 34.0 41.0 33 37.76784581049691 40.0 36.0 41.0 33.0 41.0 34 37.65122595533423 40.0 36.0 41.0 33.0 41.0 35 37.59415488788012 40.0 36.0 41.0 33.0 41.0 36 37.534326749358556 40.0 36.0 41.0 33.0 41.0 37 37.42874732415322 40.0 36.0 41.0 33.0 41.0 38 37.371618564683374 40.0 35.0 41.0 33.0 41.0 39 37.31816994853265 40.0 35.0 41.0 33.0 41.0 40 37.20264472345788 40.0 35.0 41.0 32.0 41.0 41 37.13702461019934 39.0 35.0 41.0 32.0 41.0 42 37.12042297356795 39.0 35.0 41.0 32.0 41.0 43 36.97308212002976 39.0 35.0 41.0 32.0 41.0 44 36.79153141937541 39.0 35.0 41.0 31.0 41.0 45 36.7981432280201 39.0 35.0 41.0 31.0 41.0 46 36.69041553433434 39.0 35.0 41.0 31.0 41.0 47 36.584172650948126 39.0 35.0 41.0 31.0 41.0 48 36.53702005556652 39.0 35.0 41.0 31.0 41.0 49 36.499965081148375 39.0 35.0 41.0 31.0 41.0 50 36.356501738351525 39.0 35.0 40.0 31.0 41.0 51 35.13489304203926 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 12.0 10 17.0 11 14.0 12 14.0 13 7.0 14 15.0 15 21.0 16 30.0 17 54.0 18 101.0 19 171.0 20 331.0 21 548.0 22 915.0 23 1413.0 24 2106.0 25 2997.0 26 4032.0 27 4904.0 28 6012.0 29 6902.0 30 8576.0 31 10907.0 32 14415.0 33 20537.0 34 37469.0 35 52711.0 36 46989.0 37 72018.0 38 130022.0 39 234233.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.51031624333885 22.634855086765754 24.226243794312783 11.628584875582613 2 31.406774257215297 24.338591403889655 26.501586530432537 17.753047808462508 3 31.505761610518167 24.700381070945998 27.417826832860158 16.37603048567568 4 28.623741782683286 26.51585771327068 26.399107291967145 18.461293212078886 5 24.497244447143487 31.832480604855242 24.471586682253633 19.19868826574764 6 26.056295261663653 34.651039215388586 24.31718462963244 14.975480893315318 7 79.9647775061867 6.600118420453338 8.534926442679946 4.900177630680007 8 80.80571454597903 5.41697663473363 8.608711494375028 5.168597324912323 9 74.087934777658 8.260433904686717 10.88921614769156 6.762415169963715 10 39.96993942338348 28.229310580412044 17.543838340899086 14.256911655305387 11 28.1444425888533 26.34308530827273 25.80199492917546 19.71047717369851 12 25.31191643766985 23.098364886817375 31.12757526530736 20.462143410205414 13 23.427664839752836 24.820016093035964 32.036376334127866 19.715942733083335 14 19.025460397467626 29.29190641747764 30.186588124554024 21.496045060500705 15 18.19712450847921 26.621828836898597 34.9054913689708 20.27555528565139 16 21.104953922297966 26.507203910911382 31.379142818103144 21.008699348687507 17 21.03223161826104 26.15892632122307 28.5259689981326 24.28287306238329 18 21.981113455903564 24.87345711813199 31.81335114700837 21.33207827895608 19 22.43703220125404 27.37577238981584 28.40770036588884 21.77949504304128 20 23.798108309168477 26.975420164877704 29.258202134604584 19.96826939134923 21 23.68682344724976 26.594045576692427 29.965081148374757 19.75404982768306 22 22.122914357720862 25.16829368272428 29.17667420711434 23.532117752440524 23 20.43709292969165 25.304932667344797 30.288915541925395 23.969058861038153 24 21.736074210150758 24.82669622117297 30.35343950688509 23.083790061791184 25 20.54276041113152 27.54095374011265 28.197428150667253 23.718857698088573 26 19.554556910137094 29.331379901923572 28.263773968755217 22.850289219184113 27 21.666995612370382 27.986548651069583 28.70299239376319 21.64346334279685 28 19.033203273262785 27.97182200494937 30.582689358859522 22.412285362928326 29 20.0845643493707 27.650872212185163 29.98254057418738 22.28202286425676 30 22.168005222645633 27.098850714318246 29.431581823978625 21.301562239057496 31 22.039109113820274 29.522219017110235 26.102145232058543 22.336526637010945 32 22.47483565366572 30.663002717597582 25.662623164862524 21.19953846387417 33 23.371339213870375 27.981690376060854 26.635796377548697 22.011174032520078 34 21.291693867946012 27.83579030470494 27.918988264229434 22.953527563119618 35 21.87741964868599 28.193025338940593 26.64854934944661 23.281005662926805 36 24.597446369198536 27.715244356050828 27.514233227564638 20.173076047185994 37 22.682071447006848 28.041659708199855 28.195909939727027 21.08035890506627 38 21.84492993456511 28.812151760365584 26.420210424036316 22.92270788103299 39 22.12169978896868 26.21160824084898 29.090136183521338 22.576555786660997 40 22.59401521247362 25.36004372447508 29.158759318019644 22.887181745031654 41 22.200646757860536 25.367786600270243 27.11479192919064 25.31677471267858 42 23.502512639106076 25.72137792824935 27.63143911215024 23.144670320494328 43 24.321739262453125 25.34835350023532 27.75426237721469 22.575644860096862 44 21.04665462219321 26.996371475852854 27.96058724399168 23.99638665796226 45 21.4860248682952 26.248500766696527 27.500417508008564 24.765056856999713 46 23.34826240757891 25.73580093218152 28.106031852065527 22.809904808174046 47 20.94888183764252 25.69222827819697 29.343981052727464 24.01490883143304 48 21.75945465863027 25.129275661560417 29.05263637329771 24.058633306511606 49 22.569875658523994 23.832571697511653 30.324441677926732 23.27311096603762 50 21.115733219973585 23.7809525255439 29.994230798427136 25.109083456055387 51 20.47702187741965 24.08110282842698 28.2736423398667 27.16823295428667 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 379.0 1 593.0 2 807.0 3 1765.5 4 2724.0 5 1962.5 6 1201.0 7 1184.5 8 1168.0 9 1212.5 10 1257.0 11 1310.5 12 1364.0 13 1375.5 14 1387.0 15 1389.0 16 1391.0 17 1560.5 18 1730.0 19 1859.5 20 1989.0 21 2092.0 22 2195.0 23 2298.5 24 2402.0 25 3894.0 26 5723.5 27 6061.0 28 7074.5 29 8088.0 30 9424.5 31 10761.0 32 12764.0 33 14767.0 34 16846.0 35 18925.0 36 20799.0 37 22673.0 38 24636.5 39 26600.0 40 29555.5 41 32511.0 42 36596.0 43 40681.0 44 45624.5 45 50568.0 46 56089.5 47 61611.0 48 66500.5 49 71390.0 50 69172.0 51 66954.0 52 57168.0 53 47382.0 54 40940.5 55 34499.0 56 31467.5 57 28436.0 58 25810.5 59 23185.0 60 21746.0 61 20307.0 62 18103.0 63 15899.0 64 13964.5 65 12030.0 66 9859.5 67 7689.0 68 6220.0 69 4751.0 70 3780.5 71 2810.0 72 2440.5 73 2071.0 74 1716.5 75 909.0 76 456.0 77 387.0 78 318.0 79 286.5 80 255.0 81 178.5 82 102.0 83 120.5 84 139.0 85 73.0 86 7.0 87 4.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 658670.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.489167264186012 #Duplication Level Percentage of deduplicated Percentage of total 1 71.89333062140769 21.200744518741168 2 11.891859395612716 7.013620615988106 3 4.374084586518941 3.8696433599866484 4 2.1138573847511304 2.4934357596624355 5 1.263043949467476 1.8623057143932247 6 0.8364200124774324 1.479919779063573 7 0.5486001731885132 1.1324433587822234 8 0.42289262388571475 0.9976601056445076 9 0.3481587350791669 0.924022005591328 >10 5.556356070526995 41.754206385466844 >50 0.6846860949343561 12.417508506504051 >100 0.06205614153480067 3.1564172948468827 >500 0.002585672563950028 0.5316103338407688 >1k 0.0020685380511600224 1.1664622614882503 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 2443 0.370898932697709 No Hit CCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 2119 0.3217088982343207 No Hit CTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGCT 1701 0.25824768093278877 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 0.21042403631560566 No Hit GGGGAAGGGGAAGAAGATTGATCAAACTGAATGAAACACACACACACACAC 860 0.13056614085961105 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCC 783 0.11887591661985517 No Hit TCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 706 0.10718569238009928 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5182109402280352E-4 0.0 0.0 0.27661803330954804 0.0 2 1.5182109402280352E-4 0.0 0.0 1.2467548241152626 0.0 3 1.5182109402280352E-4 0.0 0.0 1.7234730593468657 0.0 4 1.5182109402280352E-4 0.0 0.0 2.301152322103633 0.0 5 1.5182109402280352E-4 0.0 0.0 3.8076730380919126 0.0 6 1.5182109402280352E-4 0.0 0.0 4.6429926974053775 0.0 7 1.5182109402280352E-4 0.0 0.0 5.484081558291709 0.0 8 1.5182109402280352E-4 0.0 0.0 6.765907055126239 0.0 9 1.5182109402280352E-4 0.0 0.0 7.266461202119422 0.0 10 1.5182109402280352E-4 0.0 0.0 8.3894818346061 0.0 11 1.5182109402280352E-4 0.0 0.0 10.079706074361972 0.0 12 1.5182109402280352E-4 0.0 0.0 11.381268313419467 0.0 13 1.5182109402280352E-4 0.0 0.0 11.88561798776322 0.0 14 1.5182109402280352E-4 0.0 0.0 12.101052120181578 0.0 15 1.5182109402280352E-4 0.0 0.0 12.493054184948457 0.0 16 1.5182109402280352E-4 0.0 0.0 13.29527684576495 0.0 17 1.5182109402280352E-4 0.0 0.0 14.306253510862799 0.0 18 1.5182109402280352E-4 0.0 0.0 15.459031077777947 0.0 19 3.0364218804560704E-4 0.0 0.0 16.158015394658936 0.0 20 3.0364218804560704E-4 0.0 0.0 16.800522264563437 0.0 21 3.0364218804560704E-4 0.0 0.0 17.58042722455858 0.0 22 3.0364218804560704E-4 0.0 0.0 18.390089118982193 0.0 23 3.0364218804560704E-4 0.0 0.0 19.176066922738244 0.0 24 3.0364218804560704E-4 0.0 0.0 19.829201269224345 0.0 25 4.554632820684106E-4 0.0 0.0 20.392153885860903 0.0 26 4.554632820684106E-4 0.0 0.0 20.917151228991756 0.0 27 4.554632820684106E-4 0.0 0.0 21.433191127575267 0.0 28 6.072843760912141E-4 0.0 0.0 21.981720740279656 0.0 29 6.072843760912141E-4 0.0 0.0 22.569723837429972 0.0 30 7.591054701140176E-4 0.0 0.0 23.219214477659527 0.0 31 7.591054701140176E-4 0.0 0.0 23.82315878968224 0.0 32 7.591054701140176E-4 0.0 0.0 24.36698194847192 0.0 33 7.591054701140176E-4 0.0 0.0 24.898963061927823 0.0 34 7.591054701140176E-4 0.0 0.0 25.456146476991513 0.0 35 7.591054701140176E-4 0.0 0.0 26.03959494132115 0.0 36 7.591054701140176E-4 0.0 0.0 26.594501039974492 0.0 37 7.591054701140176E-4 0.0 0.0 27.15092534956807 0.0 38 7.591054701140176E-4 0.0 0.0 27.722531768563925 0.0 39 9.109265641368212E-4 0.0 0.0 28.293834545371734 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 70 0.0 45.000004 6 ATAACGG 35 1.2108649E-7 45.000004 2 CGAACTC 20 7.031091E-4 45.0 13 TTTACGG 45 3.8380676E-10 45.0 2 TTGCTCG 25 3.888985E-5 45.0 1 GCGATAT 40 6.8066583E-9 45.0 9 TCCCGCT 20 7.031091E-4 45.0 38 TCATCCG 20 7.031091E-4 45.0 25 CGTCCGG 25 3.888985E-5 45.0 2 TTACCGG 40 6.8066583E-9 45.0 2 TATCGTA 20 7.031091E-4 45.0 28 TTCTCGT 25 3.888985E-5 45.0 19 TACGGGT 70 0.0 41.785717 4 TTGCGAG 55 6.002665E-11 40.909092 1 GGCGATA 205 0.0 40.609756 8 CGTTCAT 50 1.0804797E-9 40.5 17 CCTCATA 50 1.0804797E-9 40.5 18 TACACGG 50 1.0804797E-9 40.5 2 TAGTAGT 95 0.0 40.26316 21 GACACGT 45 1.9261279E-8 40.0 9 >>END_MODULE