##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936443.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 414194 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8519751613978 33.0 31.0 34.0 30.0 34.0 2 31.895901437490643 33.0 31.0 34.0 30.0 34.0 3 31.93407919960212 33.0 31.0 34.0 30.0 34.0 4 35.61975789122971 37.0 35.0 37.0 33.0 37.0 5 34.7302664934789 37.0 35.0 37.0 33.0 37.0 6 35.209426017759796 37.0 35.0 37.0 33.0 37.0 7 35.769091295383326 37.0 35.0 37.0 35.0 37.0 8 35.71483411155159 37.0 35.0 37.0 35.0 37.0 9 37.595322481735614 39.0 37.0 39.0 35.0 39.0 10 37.24183595126921 39.0 37.0 39.0 34.0 39.0 11 37.19079706610912 39.0 37.0 39.0 34.0 39.0 12 37.0359227801465 39.0 37.0 39.0 33.0 39.0 13 36.936148278343 39.0 37.0 39.0 33.0 39.0 14 37.96322979087095 40.0 37.0 41.0 33.0 41.0 15 38.05966286329594 40.0 37.0 41.0 33.0 41.0 16 38.15466665379025 40.0 37.0 41.0 34.0 41.0 17 38.1185845280231 40.0 37.0 41.0 34.0 41.0 18 38.142467056500095 40.0 37.0 41.0 34.0 41.0 19 38.06907391222471 40.0 37.0 41.0 34.0 41.0 20 37.98890857907164 40.0 36.0 41.0 34.0 41.0 21 37.96343259438814 40.0 36.0 41.0 34.0 41.0 22 38.03814396152528 40.0 36.0 41.0 34.0 41.0 23 38.0566304678484 40.0 36.0 41.0 34.0 41.0 24 38.0010912760687 40.0 36.0 41.0 34.0 41.0 25 37.892316161025995 40.0 36.0 41.0 34.0 41.0 26 37.946242581978495 40.0 36.0 41.0 34.0 41.0 27 37.926049146052335 40.0 36.0 41.0 34.0 41.0 28 37.755727992196896 40.0 36.0 41.0 33.0 41.0 29 37.729365949289466 40.0 36.0 41.0 33.0 41.0 30 37.61144536135241 40.0 36.0 41.0 33.0 41.0 31 37.46661709247358 39.0 36.0 41.0 33.0 41.0 32 37.38164000444236 39.0 35.0 41.0 33.0 41.0 33 37.261080556454225 39.0 35.0 41.0 32.0 41.0 34 37.18871108707514 39.0 35.0 41.0 32.0 41.0 35 37.152537216859734 39.0 35.0 41.0 32.0 41.0 36 37.03043984219955 39.0 35.0 41.0 31.0 41.0 37 36.922852576328964 39.0 35.0 41.0 31.0 41.0 38 36.76863257314206 39.0 35.0 41.0 31.0 41.0 39 36.82980197685143 39.0 35.0 41.0 31.0 41.0 40 36.73502513315017 39.0 35.0 41.0 31.0 41.0 41 36.65649912842774 39.0 35.0 41.0 31.0 41.0 42 36.68690517004109 39.0 35.0 41.0 31.0 41.0 43 36.55088195386703 39.0 35.0 41.0 31.0 41.0 44 36.415923456158225 39.0 35.0 41.0 30.0 41.0 45 36.37858829437413 39.0 35.0 40.0 30.0 41.0 46 36.223851625083896 39.0 35.0 40.0 30.0 41.0 47 36.01347919091054 38.0 35.0 40.0 29.0 41.0 48 36.03040121295818 38.0 35.0 40.0 29.0 41.0 49 36.04431739716172 38.0 35.0 40.0 29.0 41.0 50 35.930556695654694 38.0 35.0 40.0 29.0 41.0 51 34.576251708136766 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 0.0 10 11.0 11 4.0 12 10.0 13 4.0 14 6.0 15 13.0 16 18.0 17 44.0 18 90.0 19 148.0 20 325.0 21 554.0 22 804.0 23 1173.0 24 1736.0 25 2478.0 26 3162.0 27 3743.0 28 4252.0 29 5315.0 30 6554.0 31 8311.0 32 11322.0 33 15468.0 34 26836.0 35 34955.0 36 31635.0 37 48023.0 38 86106.0 39 121033.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.605880336267546 21.966759537801128 23.88953002699218 11.537830098939144 2 30.680309227077167 27.97167510876546 24.005176318343576 17.3428393458138 3 29.44707069634036 27.131247676209696 27.58586556058272 15.835816066867217 4 28.119673389764216 23.07397016856835 30.673549109837417 18.132807331830012 5 25.798055983428053 29.163145772270965 26.27271278676176 18.76608545753922 6 24.201944016571943 34.10527434004356 26.036108683370596 15.656672960013907 7 72.50370599284393 6.673684312182214 15.003597348102579 5.819012346871273 8 70.39672230886976 8.849959197863804 12.34107688667629 8.412241606590149 9 65.62432097036654 7.155825531031352 15.188051975644262 12.031801522957842 10 37.564522904725806 23.166921780614878 24.022559476960073 15.245995837699242 11 29.937662061739186 23.87818268733975 26.947758779702262 19.2363964712188 12 24.47572876478172 20.84820156738147 33.97345205386848 20.702617613968332 13 22.159422879133935 25.07593060256788 35.13281216048518 17.631834357813005 14 18.31460619902751 29.25295875845618 31.271578052796517 21.160856989719793 15 14.907265677436177 25.634847438639863 40.62420025398726 18.833686629936697 16 17.29793285272119 27.055437790021102 31.50407779929212 24.142551557965593 17 17.21415568550003 27.110725891731896 30.967131344249317 24.707987078518762 18 20.035297469301824 24.524256749252764 33.21800895232669 22.22243682911872 19 20.24413680545831 26.760406959057832 29.78193793246643 23.213518303017427 20 20.71227492431083 26.040454473024717 33.12578163855584 20.121488964108604 21 20.475912253678228 28.27105172938285 32.27014394221065 18.982892074728266 22 17.43023800441339 26.31399778847593 30.12911823927918 26.126645967831497 23 16.994451875208235 27.938115955325284 31.51421797515174 23.55321419431474 24 21.158201229375607 24.72995745954794 29.854609192793713 24.257232118282737 25 16.835106254557044 29.470731106679477 29.363052096360644 24.331110542402836 26 19.273818548795973 25.635330304156987 30.904117394264524 24.186733752782512 27 22.39819987735216 26.184348397127916 29.307039696374165 22.110412029145763 28 16.59463922702888 25.370961433531146 34.45342037789055 23.580978961549416 29 22.066712699845965 24.47355586995466 30.618502440885187 22.841228989314185 30 25.934224059257254 25.389793188699016 29.450450754960233 19.225531997083493 31 24.65245754404941 26.527424347045102 27.48856815888207 21.33154995002342 32 24.256990685524173 31.53208399928536 24.038494039025192 20.172431276165277 33 24.999879283620718 27.81232948811427 24.80383588366804 22.383955344596977 34 24.343182180330956 24.915860683641 29.23388557052975 21.507071565498293 35 23.080730285808098 28.75657300685186 25.52016687832272 22.64252982901732 36 27.380164850287546 26.546497534971536 27.717446413999237 18.35589120074168 37 22.374056601495916 27.51874725370237 31.940829659531524 18.16636648527019 38 21.353278898294036 30.31502146337224 27.45549187095902 20.87620776737471 39 25.67564957483691 26.603234233233703 27.963707827732897 19.75740836419649 40 26.33814106433217 25.879418823063588 27.869066186376436 19.913373926227806 41 22.640598366948822 28.17230573113082 24.34776940274364 24.839326499176714 42 22.94552794101315 26.519215633253985 28.05134791909105 22.483908506641814 43 24.129997054520345 25.513889626600093 28.36086471556807 21.99524860331149 44 22.45566087389001 23.297054037480024 30.009850456549348 24.23743463208062 45 22.82167293587063 22.02494483261467 27.721550770894797 27.431831460619904 46 28.245942722492355 24.24540191311318 27.860374607068184 19.64828075732628 47 20.454424738166175 25.047200104298952 33.4633046350261 21.035070522508775 48 21.28471199486231 25.267869645624998 29.00742164299821 24.439996716514482 49 22.883238289304046 21.185241698334597 34.47345929685123 21.458060715510126 50 23.506859104670756 21.06742251215614 31.1380657373115 24.287652645861602 51 21.425708725862762 21.19948623108978 27.063163638295094 30.31164140475236 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 537.0 1 574.0 2 611.0 3 1291.0 4 1971.0 5 1379.5 6 788.0 7 789.0 8 790.0 9 815.0 10 840.0 11 892.5 12 945.0 13 999.0 14 1053.0 15 1008.5 16 964.0 17 1089.0 18 1214.0 19 1126.5 20 1039.0 21 1299.0 22 1559.0 23 1447.5 24 1336.0 25 1761.5 26 2411.5 27 2636.0 28 3794.0 29 4952.0 30 5381.5 31 5811.0 32 6700.0 33 7589.0 34 8445.0 35 9301.0 36 11477.0 37 13653.0 38 14570.5 39 15488.0 40 16772.0 41 18056.0 42 21212.5 43 24369.0 44 28287.0 45 32205.0 46 45253.0 47 58301.0 48 57403.0 49 56505.0 50 55123.0 51 53741.0 52 42369.5 53 30998.0 54 24968.0 55 18938.0 56 16707.0 57 14476.0 58 12149.5 59 9823.0 60 8419.5 61 7016.0 62 6054.0 63 5092.0 64 4243.5 65 3395.0 66 2811.5 67 2228.0 68 1915.0 69 1602.0 70 1142.5 71 683.0 72 677.0 73 671.0 74 509.0 75 294.0 76 241.0 77 192.5 78 144.0 79 101.0 80 58.0 81 37.5 82 17.0 83 16.5 84 16.0 85 10.5 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 414194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.30466367311782 #Duplication Level Percentage of deduplicated Percentage of total 1 70.18641825658933 23.375350544564842 2 12.691564573611236 8.453765792195584 3 5.217954314438873 5.213466405122421 4 2.584050029096889 3.4424366853432877 5 1.5443763240886752 2.5717467029249668 6 1.0351220117234858 2.068463427665509 7 0.7280252844781457 1.69726460715494 8 0.5332146649948072 1.4206828066580994 9 0.4315666918171749 1.2935865171141991 >10 4.785895355009556 35.05567137881722 >50 0.18493680334823667 3.981054547223797 >100 0.06527181294643647 4.072839568941127 >500 0.005801938928572131 1.4574495290588756 >1k 0.005801938928572131 5.89622148721515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 4633 1.1185579704196584 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3960 0.9560737239071547 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 3940 0.9512450687359064 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3759 0.9075457394361096 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 3694 0.8918526101295529 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 2169 0.5236676533218733 No Hit TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 1145 0.2764405085539626 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1111 0.2682317947628406 No Hit ACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 944 0.22791252408291768 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCT 938 0.2264639275315432 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT 796 0.1921804758156806 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC 715 0.17262442237212514 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTA 704 0.1699686620279386 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGGAAT 695 0.16779576720087688 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 639 0.15427553272138178 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTC 603 0.14558395341313493 No Hit ACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 486 0.11733632066133261 No Hit AGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 457 0.11033477066302265 No Hit AAGCAGAGGTGATGTTTTGTTTTAGATGTTTTCCTGAATAATCTGTAATAT 451 0.10888617411164815 No Hit GCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 438 0.1057475482503368 No Hit GGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 432 0.10429895169896232 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4143275856241278E-4 0.0 0.0 0.559158268830548 0.0 2 2.4143275856241278E-4 0.0 0.0 3.0797162682221373 0.0 3 2.4143275856241278E-4 0.0 0.0 4.007300926618927 0.0 4 2.4143275856241278E-4 0.0 0.0 5.228226386669049 0.0 5 2.4143275856241278E-4 0.0 0.0 8.751454632370338 0.0 6 2.4143275856241278E-4 0.0 0.0 10.06750459929405 0.0 7 2.4143275856241278E-4 0.0 0.0 11.54941887135014 0.0 8 2.4143275856241278E-4 0.0 0.0 13.819611100112507 0.0 9 2.4143275856241278E-4 0.0 0.0 14.552600955107993 0.0 10 2.4143275856241278E-4 0.0 0.0 17.259303611351204 0.0 11 2.4143275856241278E-4 0.0 0.0 19.808109243494595 0.0 12 4.8286551712482556E-4 0.0 0.0 22.972568409972137 0.0 13 4.8286551712482556E-4 0.0 0.0 23.88518423733806 0.0 14 4.8286551712482556E-4 0.0 0.0 24.27051092000367 0.0 15 4.8286551712482556E-4 0.0 0.0 25.047200104298952 0.0 16 4.8286551712482556E-4 0.0 0.0 26.328483753989676 0.0 17 4.8286551712482556E-4 0.0 0.0 27.869307619134993 0.0 18 4.8286551712482556E-4 0.0 0.0 29.565131315277384 0.0 19 4.8286551712482556E-4 0.0 0.0 30.7616720667127 0.0 20 4.8286551712482556E-4 0.0 0.0 32.112971216386526 0.0 21 4.8286551712482556E-4 0.0 0.0 33.29285310748104 0.0 22 7.242982756872383E-4 0.0 0.0 34.470079238231364 0.0 23 7.242982756872383E-4 0.0 0.0 35.47419808109243 0.0 24 7.242982756872383E-4 0.0 0.0 36.28613644813783 0.0 25 7.242982756872383E-4 0.0 0.0 37.043993877265244 0.0 26 7.242982756872383E-4 0.0 0.0 37.717349840895814 0.0 27 7.242982756872383E-4 0.0 0.0 38.484381714848595 0.0 28 7.242982756872383E-4 0.0 0.0 39.29318145603268 0.0 29 7.242982756872383E-4 0.0 0.0 40.05852330067553 0.0 30 7.242982756872383E-4 0.0 0.0 40.841731169452 0.0 31 7.242982756872383E-4 0.0 0.0 41.55323350893543 0.0 32 7.242982756872383E-4 0.0 0.0 42.22151938463619 0.0 33 7.242982756872383E-4 0.0 0.0 42.86348908965364 0.0 34 7.242982756872383E-4 0.0 0.0 43.50401019811972 0.0 35 7.242982756872383E-4 0.0 0.0 44.19619791691816 0.0 36 7.242982756872383E-4 0.0 0.0 44.83068320642018 0.0 37 7.242982756872383E-4 0.0 0.0 45.461788437302324 0.0 38 7.242982756872383E-4 0.0 0.0 46.06054167853711 0.0 39 7.242982756872383E-4 0.0 0.0 46.71627305079262 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTATG 20 7.028054E-4 45.000004 1 CGGCGCA 20 7.028054E-4 45.000004 22 CGAACTG 20 7.028054E-4 45.000004 11 CTCGTAG 25 3.8864688E-5 45.000004 1 GTCGACG 45 3.8380676E-10 45.000004 1 GGGCTAA 30 2.1621254E-6 45.000004 7 GTTTCGT 60 0.0 45.000004 10 TTTACGG 20 7.028054E-4 45.000004 2 CGAAAGG 50 2.1827873E-11 45.000004 2 CACGGCG 20 7.028054E-4 45.000004 2 TTGCTCG 25 3.8864688E-5 45.000004 1 GTCTAGA 20 7.028054E-4 45.000004 39 CGATTGA 20 7.028054E-4 45.000004 10 CACGAGG 50 2.1827873E-11 45.000004 2 TCGATTG 35 1.2094097E-7 45.000004 1 CGTTCTA 25 3.8864688E-5 45.000004 41 GCGTTAG 35 1.2094097E-7 45.000004 1 AGACGAC 35 1.2094097E-7 45.000004 38 ACGATAG 25 3.8864688E-5 45.000004 1 CGCTCAC 25 3.8864688E-5 45.000004 19 >>END_MODULE