##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936435.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 476926 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.890012287021467 33.0 31.0 34.0 30.0 34.0 2 31.981387049563246 33.0 31.0 34.0 30.0 34.0 3 31.94345034659465 33.0 31.0 34.0 30.0 34.0 4 35.61179512125571 37.0 35.0 37.0 33.0 37.0 5 31.793024494366 37.0 35.0 37.0 0.0 37.0 6 33.66648285058898 37.0 35.0 37.0 17.0 37.0 7 35.39526257742291 37.0 35.0 37.0 32.0 37.0 8 35.661670783308104 37.0 35.0 37.0 33.0 37.0 9 37.59502522403895 39.0 37.0 39.0 35.0 39.0 10 36.997320339004375 39.0 37.0 39.0 33.0 39.0 11 37.080599506003026 39.0 37.0 39.0 34.0 39.0 12 37.10606047898416 39.0 37.0 39.0 34.0 39.0 13 37.051003719654624 39.0 37.0 39.0 33.0 39.0 14 38.2277502170148 40.0 38.0 41.0 33.0 41.0 15 38.32760637918671 40.0 38.0 41.0 34.0 41.0 16 38.320588518973594 40.0 37.0 41.0 34.0 41.0 17 38.306231994061974 40.0 37.0 41.0 34.0 41.0 18 38.252584258354545 40.0 37.0 41.0 34.0 41.0 19 38.113568981351406 40.0 37.0 41.0 34.0 41.0 20 38.140925426586094 40.0 37.0 41.0 34.0 41.0 21 38.13722883633939 40.0 37.0 41.0 34.0 41.0 22 38.22326105098065 40.0 37.0 41.0 34.0 41.0 23 38.22109929003661 40.0 37.0 41.0 34.0 41.0 24 38.1953825121717 40.0 37.0 41.0 34.0 41.0 25 37.96800342191451 40.0 37.0 41.0 34.0 41.0 26 38.01428523502598 40.0 37.0 41.0 34.0 41.0 27 37.98570637792865 40.0 37.0 41.0 34.0 41.0 28 37.910950545786974 40.0 37.0 41.0 33.0 41.0 29 37.873705774061385 40.0 37.0 41.0 33.0 41.0 30 37.71126757610195 40.0 36.0 41.0 33.0 41.0 31 37.734241790130966 40.0 36.0 41.0 33.0 41.0 32 37.62318472886779 40.0 36.0 41.0 33.0 41.0 33 37.56470815178875 40.0 36.0 41.0 33.0 41.0 34 37.515727806829574 40.0 36.0 41.0 33.0 41.0 35 37.52026729513593 40.0 36.0 41.0 33.0 41.0 36 37.446182426623835 40.0 36.0 41.0 33.0 41.0 37 37.371011435736364 40.0 36.0 41.0 33.0 41.0 38 37.283488423780625 40.0 36.0 41.0 32.0 41.0 39 37.21169531541581 40.0 36.0 41.0 32.0 41.0 40 37.172043461669105 40.0 36.0 41.0 32.0 41.0 41 37.10722418152921 40.0 36.0 41.0 31.0 41.0 42 37.11747524773235 40.0 36.0 41.0 32.0 41.0 43 37.041402649467635 40.0 35.0 41.0 32.0 41.0 44 37.000912091183956 40.0 35.0 41.0 31.0 41.0 45 37.00181998884523 40.0 35.0 41.0 31.0 41.0 46 36.87384206354864 39.0 35.0 41.0 31.0 41.0 47 36.765540146689425 39.0 35.0 41.0 31.0 41.0 48 36.74841380004445 39.0 35.0 41.0 31.0 41.0 49 36.7309771327208 39.0 35.0 41.0 31.0 41.0 50 36.622499087908814 39.0 35.0 41.0 31.0 41.0 51 35.57631791934178 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 11.0 10 14.0 11 10.0 12 5.0 13 7.0 14 5.0 15 14.0 16 25.0 17 52.0 18 91.0 19 191.0 20 412.0 21 712.0 22 1188.0 23 1652.0 24 2269.0 25 2944.0 26 3566.0 27 3956.0 28 4290.0 29 5196.0 30 6664.0 31 8616.0 32 11632.0 33 16703.0 34 26920.0 35 36583.0 36 35730.0 37 55722.0 38 95015.0 39 156632.0 40 92.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.72045558430448 18.935222655086953 23.257486486373146 11.086835274235415 2 32.49560728498761 26.707497599208263 23.812289537580252 16.984605578223874 3 30.755924399173036 26.141581712886275 26.672691360923917 16.429802527016772 4 26.641030264653214 24.793783521971964 29.61738299023329 18.947803223141534 5 23.496726955544467 37.34038404280748 22.871263047097454 16.2916259545506 6 22.720925258845188 37.76560724305238 25.33013507336568 14.183332424736752 7 78.57697001211929 5.0561303011368635 11.770379471867754 4.596520214876102 8 79.15022456313977 6.585508024305657 8.765930144299116 5.498337268255453 9 73.88924067884746 5.827738475151281 11.209076460499114 9.073944385502152 10 36.461841040329105 24.410705224709915 22.20239617886213 16.92505755609885 11 28.47255129726624 26.478950612883338 25.356344590146062 19.692153499704357 12 24.031191421729996 22.28920209843875 31.467565198793945 22.21204128103731 13 23.451227234413725 25.65702016665059 33.95054998050012 16.941202618435565 14 21.079370803856364 30.212024506946573 29.329707334051825 19.37889735514524 15 19.234640174786026 26.467628101634215 36.05569836830032 18.242033355279435 16 20.706147284903736 25.763116290577575 31.14466395205965 22.38607247245904 17 20.862775357183295 25.56476266758365 29.873187874009805 23.69927410122325 18 21.767527876442045 25.12045893912263 31.809337297610114 21.30267588682521 19 21.19112818340791 27.91103860976336 28.789162259973246 22.108670946855487 20 21.96860728918113 27.73616871380466 30.614812360827464 19.680411636186747 21 21.412126828900078 29.46683552584678 30.039041696196055 19.081995949057088 22 19.081995949057088 26.156259042283292 29.64506023995337 25.116684768706254 23 18.67648230543103 28.35869715637227 29.74486607985306 23.219954458343643 24 20.415536162842873 26.20008135434009 29.763107903532205 23.621274579284837 25 18.214565781693594 29.802317340635653 28.358487480238026 23.624629397432724 26 18.446048233897923 27.08554366924848 30.75403731396485 23.71437078288875 27 22.29654076313726 27.45331560871079 27.893425814486942 22.356717813665014 28 17.90319672234267 26.294435614749457 31.39438822794312 24.40797943496475 29 20.016732155512596 25.28023215341583 29.12527310316485 25.577762587906722 30 21.61865782112948 28.564808796333185 27.576185823377212 22.24034755916012 31 20.41532648670863 26.88530296104637 25.598520525196783 27.100850027048224 32 20.4448908216369 29.699995387125043 26.32211286446954 23.533000926768512 33 20.54826115581872 29.09843455798174 25.41610228840533 24.937201997794205 34 18.145792009661875 26.855738626118097 26.890754540536687 28.107714823683338 35 19.616670091376857 26.977350783979066 27.565282664396573 25.840696460247504 36 20.732566477818363 28.613243983343327 25.90129286304374 24.752896675794567 37 19.692782528107085 27.66341109522232 28.66566301690409 23.978143359766506 38 17.861471171628303 30.29212079022742 26.85322251250718 24.993185525637102 39 19.8326365096472 29.101370023861143 27.31996158733221 23.746031879159453 40 20.164553830153945 26.058130611457543 29.439787304529425 24.33752825385909 41 18.054163538997663 27.313042274902188 26.994334550852756 27.638459635247397 42 20.36731065196697 25.029878849129634 29.795607704339876 24.80720279456352 43 21.3376918012438 26.54772438491506 27.513073306970053 24.601510506871087 44 19.91378117359926 26.349370761921136 27.43025123394405 26.306596830535554 45 19.730524232270835 25.557004650616655 26.89431903481882 27.81815208229369 46 22.200089741385458 26.91780276185404 27.108608044015213 23.773499452745288 47 18.113292208854205 25.460553628864858 31.442194386550533 24.98395977573041 48 19.327526702255696 25.791632244834627 28.79838800987994 26.082453043029734 49 20.26184355644272 23.625258425835455 31.582677396493374 24.53022062122845 50 20.293924004981907 23.515807483760582 29.96313893560007 26.227129575657436 51 19.466541979258835 23.329405400418512 26.866851461232983 30.337201159089673 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 102.0 1 238.0 2 374.0 3 1163.5 4 1953.0 5 1397.0 6 841.0 7 852.5 8 864.0 9 920.0 10 976.0 11 941.0 12 906.0 13 928.0 14 950.0 15 972.0 16 994.0 17 1009.0 18 1024.0 19 1001.5 20 979.0 21 1014.0 22 1049.0 23 1351.5 24 1654.0 25 1866.0 26 2675.5 27 3273.0 28 3972.0 29 4671.0 30 5235.0 31 5799.0 32 7606.0 33 9413.0 34 10617.5 35 11822.0 36 13198.5 37 14575.0 38 16247.0 39 17919.0 40 19972.0 41 22025.0 42 26133.0 43 30241.0 44 34945.5 45 39650.0 46 50630.5 47 61611.0 48 60317.0 49 59023.0 50 58205.5 51 57388.0 52 48692.5 53 39997.0 54 33938.5 55 27880.0 56 23459.0 57 19038.0 58 16077.5 59 13117.0 60 11463.5 61 9810.0 62 8138.5 63 6467.0 64 5029.5 65 3592.0 66 2886.0 67 2180.0 68 1552.5 69 925.0 70 763.5 71 602.0 72 523.0 73 444.0 74 403.0 75 268.0 76 174.0 77 117.5 78 61.0 79 63.5 80 66.0 81 41.5 82 17.0 83 24.0 84 31.0 85 18.5 86 6.0 87 4.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 476926.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.54162775970296 #Duplication Level Percentage of deduplicated Percentage of total 1 72.89264116369752 28.822936833165286 2 11.288059262981582 8.926964750125695 3 4.238406447701344 5.027804701479945 4 2.243101016990013 3.54783461764921 5 1.4078744914905805 2.783482453745082 6 0.9641608377799787 2.287469336878756 7 0.8111066971938167 2.2450735365688006 8 0.6089973595798704 1.926459751931937 9 0.5411409916625641 1.9257836092053873 >10 4.9027597478334215 34.08762320071067 >50 0.06406606342660141 1.7511539436970889 >100 0.030148735730164352 2.1994800080571197 >500 0.004306962247166336 1.1714806895410694 >1k 0.0032302216853747527 3.296452567243951 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTC 3631 0.761334043436508 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGC 3561 0.7466567140394946 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCG 3149 0.6602701467313588 No Hit GCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGC 2741 0.5747222839601951 No Hit CCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGC 1327 0.27824023014052496 No Hit CTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGCT 1076 0.22561152044551983 TruSeq Adapter, Index 13 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 993 0.20820840130334686 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCT 755 0.1583054813535014 No Hit GAACTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCT 716 0.15012811211802252 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGC 681 0.14278944741951582 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGCAACTAT 636 0.13335402137857863 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTT 611 0.12811211802250244 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTC 577 0.1209831294582388 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGCAACTATCGTA 534 0.11196705568578774 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0967613424304819E-4 0.0 0.0 0.23336953741251262 0.0 2 2.0967613424304819E-4 0.0 0.0 1.3746367360974239 0.0 3 2.0967613424304819E-4 0.0 0.0 1.8225049588405748 0.0 4 2.0967613424304819E-4 0.0 0.0 2.52240389494387 0.0 5 2.0967613424304819E-4 0.0 0.0 4.6854228957951545 0.0 6 2.0967613424304819E-4 0.0 0.0 5.848706088575586 0.0 7 2.0967613424304819E-4 0.0 0.0 6.9610379807349565 0.0 8 2.0967613424304819E-4 0.0 0.0 8.737204513907818 0.0 9 2.0967613424304819E-4 0.0 0.0 9.331636354486859 0.0 10 2.0967613424304819E-4 0.0 0.0 11.518348758507608 0.0 11 2.0967613424304819E-4 0.0 0.0 13.364337444383406 0.0 12 2.0967613424304819E-4 0.0 0.0 15.641210586128667 0.0 13 2.0967613424304819E-4 0.0 0.0 16.30609360781337 0.0 14 2.0967613424304819E-4 0.0 0.0 16.593349911726346 0.0 15 2.0967613424304819E-4 0.0 0.0 17.155072275363473 0.0 16 2.0967613424304819E-4 0.0 0.0 18.177662782066818 0.0 17 2.0967613424304819E-4 0.0 0.0 19.39168759933407 0.0 18 2.0967613424304819E-4 0.0 0.0 20.760453403672688 0.0 19 2.0967613424304819E-4 0.0 0.0 21.658076934367177 0.0 20 2.0967613424304819E-4 0.0 0.0 22.434507659469183 0.0 21 2.0967613424304819E-4 0.0 0.0 23.32584090613638 0.0 22 2.0967613424304819E-4 0.0 0.0 24.25659326604127 0.0 23 2.0967613424304819E-4 0.0 0.0 25.30958681220986 0.0 24 2.0967613424304819E-4 0.0 0.0 26.05519514557814 0.0 25 2.0967613424304819E-4 0.0 0.0 26.748174769251413 0.0 26 2.0967613424304819E-4 0.0 0.0 27.388525683229684 0.0 27 2.0967613424304819E-4 0.0 0.0 28.037263642577674 0.0 28 2.0967613424304819E-4 0.0 0.0 28.679291965629886 0.0 29 2.0967613424304819E-4 0.0 0.0 29.35423944175826 0.0 30 2.0967613424304819E-4 0.0 0.0 30.10886384889899 0.0 31 6.290284027291445E-4 0.0 0.0 30.767246910422163 0.0 32 6.290284027291445E-4 0.0 0.0 31.434855721852028 0.0 33 6.290284027291445E-4 0.0 0.0 32.06807764726603 0.0 34 8.387045369721927E-4 0.0 0.0 32.702976981753984 0.0 35 8.387045369721927E-4 0.0 0.0 33.34186016279255 0.0 36 8.387045369721927E-4 0.0 0.0 33.974872412072315 0.0 37 8.387045369721927E-4 0.0 0.0 34.603900814801456 0.0 38 8.387045369721927E-4 0.0 0.0 35.25054201280702 0.0 39 8.387045369721927E-4 0.0 0.0 35.87852203486495 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 30 2.1628202E-6 45.000004 9 CGCGACC 30 2.1628202E-6 45.000004 10 CCATCGA 30 2.1628202E-6 45.000004 41 CATCGAA 30 2.1628202E-6 45.000004 42 GGCGCGA 30 2.1628202E-6 45.000004 8 TGTAACG 30 2.1628202E-6 45.000004 1 CCACCCG 30 2.1628202E-6 45.000004 37 CGGAAGG 35 1.2099372E-7 45.0 2 CGAACGG 20 7.0291315E-4 45.0 2 CGCATTC 20 7.0291315E-4 45.0 12 CGCATGG 20 7.0291315E-4 45.0 2 AGGCGAC 20 7.0291315E-4 45.0 17 ACGGGTT 55 1.8189894E-12 45.0 5 TACGCAC 25 3.8873615E-5 45.0 33 GTTGTCG 20 7.0291315E-4 45.0 37 CGCTAGG 20 7.0291315E-4 45.0 2 CGCTAAT 20 7.0291315E-4 45.0 28 ACTCGTA 20 7.0291315E-4 45.0 10 CGAGCCC 25 3.8873615E-5 45.0 34 GATGACG 20 7.0291315E-4 45.0 1 >>END_MODULE