SRR2936434.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936434.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	219825
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGC	2229	1.0139883998635277	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC	2166	0.9853292391675196	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCG	1911	0.8693278744455817	No Hit
GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC	1402	0.6377800523143409	No Hit
CCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC	854	0.3884908449903332	No Hit
CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT	639	0.2906857727737973	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	599	0.2724894802683953	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCT	453	0.20607301262367791	No Hit
GAACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCT	437	0.1987944956215171	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGGCATCAT	430	0.19561014443307176	No Hit
TCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC	361	0.1642215398612533	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTC	338	0.1537586716706471	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGCATCATCGTA	325	0.14784487660639145	No Hit
ACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC	273	0.12418969634936881	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGC	236	0.10735812578187194	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	220	0.10007960877971113	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAG	35	1.2059354E-7	45.000004	1
CGTTAGG	35	1.2059354E-7	45.000004	2
ACGTAAG	35	1.2059354E-7	45.000004	1
GTTTGAT	20	7.020828E-4	45.0	29
AGGTACG	20	7.020828E-4	45.0	1
GTACCGG	20	7.020828E-4	45.0	2
ACCGGTG	20	7.020828E-4	45.0	39
GGTACCG	20	7.020828E-4	45.0	1
TCGCAAT	20	7.020828E-4	45.0	28
GGTAAAT	20	7.020828E-4	45.0	7
CCGATTA	20	7.020828E-4	45.0	18
CACATGG	25	3.880482E-5	45.0	22
CGGTTCG	20	7.020828E-4	45.0	29
AGCCACT	25	3.880482E-5	45.0	14
CACGCCC	20	7.020828E-4	45.0	27
TTACTCA	20	7.020828E-4	45.0	27
AATGGGC	40	6.7720975E-9	45.0	4
CGATTAA	20	7.020828E-4	45.0	19
TCGGCGG	20	7.020828E-4	45.0	33
TATTGCC	20	7.020828E-4	45.0	25