##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936433.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 499644 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.937343388492607 33.0 31.0 34.0 30.0 34.0 2 32.02465155190496 33.0 31.0 34.0 30.0 34.0 3 32.0140139779523 33.0 31.0 34.0 30.0 34.0 4 35.66018805389437 37.0 35.0 37.0 33.0 37.0 5 31.889791531570477 37.0 35.0 37.0 0.0 37.0 6 33.71374818871036 37.0 35.0 37.0 17.0 37.0 7 35.36098902418522 37.0 35.0 37.0 32.0 37.0 8 35.57228947010271 37.0 35.0 37.0 33.0 37.0 9 37.48273770924899 39.0 37.0 39.0 35.0 39.0 10 37.18072067311926 39.0 37.0 39.0 34.0 39.0 11 37.17792868522388 39.0 37.0 39.0 34.0 39.0 12 37.03345381911921 39.0 37.0 39.0 33.0 39.0 13 36.88635108197036 39.0 37.0 39.0 33.0 39.0 14 38.045470374906934 40.0 37.0 41.0 33.0 41.0 15 38.12713852262811 40.0 37.0 41.0 33.0 41.0 16 38.16008598121863 40.0 37.0 41.0 34.0 41.0 17 38.068206563072906 40.0 37.0 41.0 33.0 41.0 18 38.0308759837004 40.0 37.0 41.0 33.0 41.0 19 37.90430386435142 40.0 37.0 41.0 33.0 41.0 20 37.898095443956095 40.0 36.0 41.0 33.0 41.0 21 37.88268046849357 40.0 36.0 41.0 33.0 41.0 22 37.97410156031094 40.0 36.0 41.0 33.0 41.0 23 37.923771725468534 40.0 36.0 41.0 33.0 41.0 24 37.939154678130826 40.0 36.0 41.0 33.0 41.0 25 37.73663848660246 40.0 36.0 41.0 33.0 41.0 26 37.720551032335024 40.0 36.0 41.0 33.0 41.0 27 37.6403699433997 40.0 36.0 41.0 33.0 41.0 28 37.516932055623606 40.0 36.0 41.0 33.0 41.0 29 37.45427944696624 40.0 36.0 41.0 33.0 41.0 30 37.2969314151676 40.0 35.0 41.0 32.0 41.0 31 37.340194218283415 40.0 35.0 41.0 32.0 41.0 32 37.198633427000026 40.0 35.0 41.0 32.0 41.0 33 37.07532763327489 39.0 35.0 41.0 32.0 41.0 34 36.94961012240715 39.0 35.0 41.0 31.0 41.0 35 36.94428833329331 39.0 35.0 41.0 31.0 41.0 36 36.84713516023409 39.0 35.0 41.0 31.0 41.0 37 36.76902954903892 39.0 35.0 41.0 31.0 41.0 38 36.62647805237329 39.0 35.0 41.0 31.0 41.0 39 36.52593846818935 39.0 35.0 41.0 31.0 41.0 40 36.40371144254709 39.0 35.0 41.0 30.0 41.0 41 36.2830275155911 39.0 35.0 41.0 30.0 41.0 42 36.34332044415624 39.0 35.0 41.0 30.0 41.0 43 36.200602829214404 39.0 35.0 41.0 30.0 41.0 44 36.19192465035105 39.0 35.0 41.0 30.0 41.0 45 36.127831015683164 38.0 35.0 40.0 30.0 41.0 46 35.97436574841287 38.0 35.0 40.0 30.0 41.0 47 35.82135280319588 38.0 35.0 40.0 30.0 41.0 48 35.82920239210318 38.0 35.0 40.0 30.0 41.0 49 35.80631009278606 38.0 35.0 40.0 30.0 41.0 50 35.62280343604647 38.0 35.0 40.0 29.0 41.0 51 34.63810833313319 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 24.0 10 18.0 11 19.0 12 8.0 13 10.0 14 11.0 15 22.0 16 31.0 17 63.0 18 140.0 19 320.0 20 710.0 21 1288.0 22 1877.0 23 2453.0 24 3101.0 25 3649.0 26 4132.0 27 4719.0 28 5269.0 29 6213.0 30 7994.0 31 10357.0 32 14046.0 33 20334.0 34 32710.0 35 42496.0 36 41574.0 37 62654.0 38 95109.0 39 138174.0 40 98.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.14370231604902 17.98540560879346 21.00335438832449 10.867537686833025 2 30.48110254501205 28.827325055439474 22.247640319907774 18.443932079640703 3 31.815652744754264 29.267238273650843 23.33921752287629 15.577891458718607 4 26.60494271921608 24.309908654962335 29.081305889793533 20.00384273602805 5 25.950276596937016 35.13561655899 20.379710353771884 18.534396490301095 6 23.253356389749502 37.70404528023953 23.13767402390502 15.904924306105947 7 76.39139067015715 5.336199373954256 13.63290662952022 4.6395033263683745 8 75.55559558405585 9.607840782637238 9.184539392047137 5.6520242412597765 9 70.36950308619737 6.3859467941174115 10.868938684343252 12.375611435341964 10 39.93043046649215 26.794677810601147 17.53328369799297 15.74160802491374 11 33.35895157352034 23.980874382560383 23.038203200678883 19.621970843240387 12 26.3433564698065 21.78731256654738 28.380606992178432 23.488723971467685 13 25.21955632410276 25.45432347831656 31.349921143854427 17.97619905372625 14 21.030373626021728 30.04679331684159 27.209573216129883 21.713259841006796 15 18.227177750558397 23.52454947922921 35.145623684063054 23.102649086149338 16 21.289958450416695 25.104274243261205 27.880651023528753 25.725116282793348 17 21.027971916004194 25.647260849725008 27.688714364627614 25.636052869643184 18 25.412493695511202 21.595375907646243 28.627582838981354 24.364547557861197 19 23.29518617255486 24.965975774751623 25.40648942046737 26.332348632226143 20 27.377092489852778 24.438800425903242 27.231789033792058 20.95231805045192 21 23.548966864407458 29.8874798856786 26.859924266077446 19.70362898383649 22 23.242148409667685 21.618592437815725 28.120421740279077 27.018837412237513 23 21.61779186780988 28.169856938139954 27.04245422740992 23.169896966640245 24 22.06991377861037 24.34953687025162 28.361393312038167 25.21915603909984 25 21.477692116787154 29.74217642961789 25.341643249993993 23.43848820360096 26 22.136761374098356 23.54236216185924 27.785983620337678 26.534892843704718 27 24.798656643530194 24.40537662815925 25.847603493687505 24.948363234623052 28 18.984717118588435 26.525686288637512 29.07670261225993 25.412893980514127 29 24.120173563577264 23.431283073548368 27.388100327433136 25.06044303544123 30 22.75480141861005 25.430506520642698 30.098830367221463 21.715861693525788 31 25.054839045400325 24.513453578948212 23.513541641648857 26.918165734002606 32 24.92414599194627 25.513365516247568 23.993483360152428 25.56900513165374 33 21.88498210726037 24.77644082586802 25.129692340946754 28.20888472592486 34 21.820736364291378 26.182441898631826 27.309044039356024 24.68777769772078 35 20.42834498162692 25.19593950893036 27.50118084075862 26.874534668684102 36 23.605807334822394 28.01854920703541 25.261185964406657 23.11445749373554 37 19.802699522059704 25.19834121894789 28.177462353195477 26.821496905796927 38 19.342772053702237 28.345582054422746 23.88240427184155 28.429241620033462 39 22.567868322245438 25.124888920911687 25.357254365107956 26.949988391734912 40 24.047321693045447 23.936843032238954 26.984412901986214 25.031422372729384 41 19.675609033631947 25.539584183938963 26.82289790330715 27.961908879121932 42 22.50842599931151 22.43177142125193 28.248913226217066 26.81088935321949 43 23.48592197644723 22.445981538855666 27.70512604974742 26.362970434949684 44 22.740591301006315 22.92592325735924 27.798192312926805 26.535293128707636 45 22.458990801450632 21.82013593678699 26.08116979289254 29.63970346886984 46 24.753024153197074 24.559886639287175 25.24717598930438 25.43991321821137 47 19.40581694166246 25.51756850877825 31.037298556572278 24.039315992987007 48 21.603581750206146 25.326832704885877 27.14752904067696 25.922056504231012 49 23.37063989560567 21.70405328593959 30.734082666858804 24.191224151595936 50 21.756690763823844 23.546765296891387 29.655514726485254 25.041029212799515 51 22.122150971491703 21.183282497137963 26.286115714388647 30.40845081698169 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 181.0 1 479.5 2 778.0 3 1331.5 4 1885.0 5 1284.0 6 683.0 7 653.5 8 624.0 9 651.0 10 678.0 11 717.0 12 756.0 13 769.0 14 782.0 15 745.5 16 709.0 17 772.0 18 835.0 19 811.0 20 787.0 21 925.0 22 1063.0 23 1169.5 24 1276.0 25 1524.0 26 2222.5 27 2673.0 28 3218.5 29 3764.0 30 4487.5 31 5211.0 32 6296.5 33 7382.0 34 8472.0 35 9562.0 36 10401.5 37 11241.0 38 12526.0 39 13811.0 40 15073.5 41 16336.0 42 18950.5 43 21565.0 44 26247.0 45 30929.0 46 45224.0 47 59519.0 48 54396.5 49 49274.0 50 50690.5 51 52107.0 52 47036.5 53 41966.0 54 38316.5 55 34667.0 56 31014.0 57 27361.0 58 25195.0 59 23029.0 60 21556.0 61 20083.0 62 17614.0 63 15145.0 64 14122.0 65 13099.0 66 10931.0 67 8763.0 68 7509.0 69 6255.0 70 5653.0 71 5051.0 72 3950.5 73 2850.0 74 2614.0 75 1951.0 76 1524.0 77 1150.5 78 777.0 79 576.5 80 376.0 81 235.5 82 95.0 83 60.0 84 25.0 85 17.5 86 10.0 87 7.5 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 499644.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.89094744483695 #Duplication Level Percentage of deduplicated Percentage of total 1 73.06491317725484 24.762391325519182 2 10.377894431021298 7.034333494996177 3 3.891179346376445 3.956272641794372 4 2.0763784728237082 2.814817347922364 5 1.2846289479117046 2.176864607989588 6 1.0008987554903426 2.035284427195554 7 0.7206981978048507 1.7097601321775027 8 0.5916040134213341 1.6040016421613634 9 0.5104807762997009 1.5570609445055454 >10 6.342851155884198 41.31468708904822 >50 0.07547655006595562 1.7654033664094075 >100 0.052298711856725154 2.972081240700196 >500 0.005943035438264222 1.498125526452159 >1k 0.002971517719132111 1.4703302424174187 >5k 0.0017829106314792668 3.3285859707109946 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTC 5849 1.1706334910456246 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC 5491 1.098982475522572 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG 5186 1.0379390125769548 No Hit GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 2957 0.5918213768202961 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTT 1173 0.23476715421380023 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCT 1113 0.22275860412613782 No Hit CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 1055 0.2111503390413975 No Hit GAACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT 1002 0.20054278646396234 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 966 0.19333765641136488 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCCAACTT 929 0.1859323838573064 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTC 880 0.1761254012857154 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTA 830 0.16611827621266342 No Hit CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT 828 0.16571799120974134 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC 694 0.13889889601396194 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG 652 0.13049291095259824 No Hit GCGCAAGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 577 0.11548222334302023 No Hit GAATATGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTC 542 0.10847723579188381 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 540 0.10807695078896173 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.004275043831208E-4 0.0 0.0 0.17292312126233877 0.0 2 6.004275043831208E-4 0.0 0.0 1.1810409011215985 0.0 3 6.004275043831208E-4 0.0 0.0 1.4920623483920552 0.0 4 6.004275043831208E-4 0.0 0.0 2.0674720400925457 0.0 5 6.004275043831208E-4 0.0 0.0 4.376516079448567 0.0 6 6.004275043831208E-4 0.0 0.0 5.411252812002146 0.0 7 6.004275043831208E-4 0.0 0.0 6.364731688962541 0.0 8 6.004275043831208E-4 0.0 0.0 7.786544019341771 0.0 9 6.004275043831208E-4 0.0 0.0 8.266485737845345 0.0 10 6.004275043831208E-4 0.0 0.0 10.458246271345198 0.0 11 6.004275043831208E-4 0.0 0.0 11.722146168071667 0.0 12 6.004275043831208E-4 0.0 0.0 14.06221229515415 0.0 13 6.004275043831208E-4 0.0 0.0 14.603597761606263 0.0 14 6.004275043831208E-4 0.0 0.0 14.860380590980778 0.0 15 6.004275043831208E-4 0.0 0.0 15.432387860156432 0.0 16 6.004275043831208E-4 0.0 0.0 16.211942903347182 0.0 17 6.004275043831208E-4 0.0 0.0 17.085164637221702 0.0 18 0.0010007125073052013 0.0 0.0 18.03524109165726 0.0 19 0.0010007125073052013 0.0 0.0 18.773766922048498 0.0 20 0.0010007125073052013 0.0 0.0 19.319955808535678 0.0 21 0.0010007125073052013 0.0 0.0 19.933592718015227 0.0 22 0.0010007125073052013 0.0 0.0 20.56544259512773 0.0 23 0.0010007125073052013 0.0 0.0 21.191488339697866 0.0 24 0.0012008550087662417 0.0 0.0 21.676633763239426 0.0 25 0.0012008550087662417 0.0 0.0 22.117547693958098 0.0 26 0.0012008550087662417 0.0 0.0 22.55846162467677 0.0 27 0.0012008550087662417 0.0 0.0 23.05681645331476 0.0 28 0.0012008550087662417 0.0 0.0 23.48392055143262 0.0 29 0.0012008550087662417 0.0 0.0 23.937243317241876 0.0 30 0.0012008550087662417 0.0 0.0 24.52085885150227 0.0 31 0.0014009975102272818 0.0 0.0 24.956969362185877 0.0 32 0.0014009975102272818 0.0 0.0 25.40048514542354 0.0 33 0.0014009975102272818 0.0 0.0 25.87942615141981 0.0 34 0.0014009975102272818 0.0 0.0 26.353964022383938 0.0 35 0.0014009975102272818 0.0 0.0 26.878337376211864 0.0 36 0.0014009975102272818 0.0 0.0 27.310044751863327 0.0 37 0.0014009975102272818 0.0 0.0 27.77437535525294 0.0 38 0.0014009975102272818 0.0 0.0 28.265324911336872 0.0 39 0.0014009975102272818 0.0 0.0 28.841134888040283 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 25 3.8876286E-5 45.0 25 ATCTCGA 20 7.0294546E-4 45.0 42 GTCGATG 20 7.0294546E-4 45.0 1 CGATTGT 20 7.0294546E-4 45.0 10 TACGGGT 40 6.8012014E-9 45.0 4 GCGCAAC 25 3.8876286E-5 45.0 24 GTTACGG 35 1.2100827E-7 45.0 2 GTACGAG 25 3.8876286E-5 45.0 1 CCCCTCG 30 2.1630294E-6 44.999996 40 TAATACG 270 0.0 43.333332 4 TCGAATG 90 0.0 42.500004 44 CCGATGA 690 0.0 42.3913 18 CGATGAA 705 0.0 41.808514 19 CGAACAC 70 0.0 41.785713 34 ATAATAC 350 0.0 41.785713 3 CGTTATT 70 0.0 41.785713 1 AACGGGA 220 0.0 40.909092 4 ACGGGAT 105 0.0 40.714287 5 ACAACGG 50 1.0786607E-9 40.5 2 TTACGGG 100 0.0 40.5 3 >>END_MODULE