##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936432.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 706142 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09116579951341 33.0 31.0 34.0 30.0 34.0 2 32.1968796644301 33.0 31.0 34.0 30.0 34.0 3 32.14179017817946 33.0 31.0 34.0 30.0 34.0 4 35.7707826471163 37.0 35.0 37.0 35.0 37.0 5 32.1135196603516 37.0 35.0 37.0 0.0 37.0 6 33.890363411325204 37.0 35.0 37.0 17.0 37.0 7 35.532034633260736 37.0 35.0 37.0 32.0 37.0 8 35.78534487397719 37.0 35.0 37.0 35.0 37.0 9 37.724122060435434 39.0 38.0 39.0 35.0 39.0 10 37.320697536756064 39.0 37.0 39.0 34.0 39.0 11 37.295764874487 39.0 37.0 39.0 34.0 39.0 12 37.27229509078911 39.0 37.0 39.0 34.0 39.0 13 37.24484027291961 39.0 37.0 39.0 34.0 39.0 14 38.4205230675983 40.0 38.0 41.0 34.0 41.0 15 38.55590801850053 40.0 38.0 41.0 34.0 41.0 16 38.51802470324665 40.0 38.0 41.0 34.0 41.0 17 38.51024723072696 40.0 38.0 41.0 34.0 41.0 18 38.42469786530188 40.0 38.0 41.0 34.0 41.0 19 38.289664118548394 40.0 37.0 41.0 34.0 41.0 20 38.331287474757204 40.0 37.0 41.0 34.0 41.0 21 38.2823157381943 40.0 37.0 41.0 34.0 41.0 22 38.3704679795282 40.0 37.0 41.0 34.0 41.0 23 38.36465611732484 40.0 37.0 41.0 34.0 41.0 24 38.33646207136808 40.0 37.0 41.0 34.0 41.0 25 38.09482936859725 40.0 37.0 41.0 34.0 41.0 26 38.141713706308366 40.0 37.0 41.0 34.0 41.0 27 38.11875231893868 40.0 37.0 41.0 34.0 41.0 28 38.03511333414526 40.0 37.0 41.0 34.0 41.0 29 37.99562410959835 40.0 37.0 41.0 34.0 41.0 30 37.850724075327626 40.0 36.0 41.0 33.0 41.0 31 37.84375238974597 40.0 37.0 41.0 33.0 41.0 32 37.73781760609056 40.0 36.0 41.0 33.0 41.0 33 37.67010742881743 40.0 36.0 41.0 33.0 41.0 34 37.54174231245273 40.0 36.0 41.0 33.0 41.0 35 37.47409302944733 40.0 36.0 41.0 33.0 41.0 36 37.37095654981576 40.0 36.0 41.0 33.0 41.0 37 37.34505524384614 40.0 36.0 41.0 33.0 41.0 38 37.20852038258594 40.0 35.0 41.0 32.0 41.0 39 37.143563192672296 40.0 35.0 41.0 32.0 41.0 40 37.0489646558341 40.0 35.0 41.0 32.0 41.0 41 36.93159166286667 39.0 35.0 41.0 31.0 41.0 42 36.90630496415735 39.0 35.0 41.0 31.0 41.0 43 36.87685054847325 39.0 35.0 41.0 31.0 41.0 44 36.862050409124514 39.0 35.0 41.0 31.0 41.0 45 36.83560671932841 39.0 35.0 41.0 31.0 41.0 46 36.71912589819045 39.0 35.0 41.0 31.0 41.0 47 36.61710675756434 39.0 35.0 41.0 31.0 41.0 48 36.576024369036254 39.0 35.0 41.0 31.0 41.0 49 36.5399183167125 39.0 35.0 41.0 31.0 41.0 50 36.433037547688706 39.0 35.0 41.0 31.0 41.0 51 35.41809720990962 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 18.0 9 32.0 10 39.0 11 37.0 12 20.0 13 23.0 14 13.0 15 24.0 16 38.0 17 80.0 18 167.0 19 272.0 20 582.0 21 1004.0 22 1584.0 23 2319.0 24 3158.0 25 4327.0 26 5358.0 27 5813.0 28 6633.0 29 7389.0 30 9273.0 31 12103.0 32 15880.0 33 23512.0 34 40138.0 35 50249.0 36 52816.0 37 84287.0 38 140888.0 39 237858.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.680188970490356 19.198971311719173 22.584975826391858 12.535863891398613 2 34.16182580840681 23.974922890863308 24.402457296124574 17.460794004605308 3 32.60420708582693 24.82163644139564 26.159894185588733 16.4142622871887 4 27.966329718385253 25.40792078647071 27.596857289327076 19.02889220581696 5 23.269115843555547 36.70380744949316 22.235046208836184 17.79203049811511 6 24.144577153037208 36.14428825930195 25.07625944923259 14.63487513842825 7 80.05075466407607 5.102373177066369 10.50199534937732 4.344876809480247 8 81.07986778863174 5.829139181637688 8.682531275579134 4.408461754151431 9 75.52121244735478 6.24520280623444 10.600559094346462 7.633025652064315 10 37.86377244236995 29.444502663770177 17.914951950174327 14.776772943685549 11 28.08302012909585 25.13163074848968 27.292102721548922 19.493246400865548 12 24.5143328112476 22.67660045713185 31.535441879961823 21.27362485165873 13 24.858597845759068 23.39840995153949 33.297268821285236 18.4457233814162 14 21.014186948234208 27.89623050321324 30.88769680885714 20.201885739695417 15 19.828731331658506 25.252569596483426 34.80886280663096 20.109836265227106 16 22.80235420071317 25.769462799267 30.302403765814805 21.12577923420502 17 23.436362657935657 24.446074585564944 29.123887263468255 22.993675493031144 18 24.247955793593924 23.409597503051792 30.708837599236418 21.633609104117866 19 23.10767522679574 26.058922992825806 28.54723270956833 22.286169070810118 20 23.977755182385412 26.03201622336584 29.74784108578728 20.24238750846147 21 23.40251677424654 27.208691736223027 29.964511387228065 19.42428010230237 22 22.92060237176092 23.808100920211515 29.700683431944285 23.57061327608328 23 20.920013255124324 26.952652582625024 29.730564107502456 22.396770054748195 24 21.511962183243597 25.424489691875007 30.136148253467432 22.927399871413964 25 21.974617003378924 27.80673009111482 28.2291663716363 21.989486533869957 26 21.010788198407685 25.96928096615128 29.494350994559166 23.525579840881864 27 22.61089129381909 24.900232531133966 29.998782114645493 22.49009406040145 28 19.852097736715844 25.617227129954035 30.925649515253305 23.605025618076816 29 21.582203012991723 24.899099614525124 30.376893032846088 23.14180433963707 30 22.57194728539019 24.81583024377533 30.770156710689918 21.84206576014456 31 23.076236790900413 24.588680463702765 28.278306629544765 24.056776115852053 32 22.72305003809432 25.080507886515747 28.89277227526475 23.30366980012519 33 23.1593645470741 23.538749996459636 28.832019622115666 24.4698658343506 34 22.480181040074093 23.58109275471506 30.459879174443667 23.478847030767184 35 22.095131007644355 24.21141923295881 30.74990582630689 22.943543933089945 36 23.057260437702332 24.858597845759068 30.593563334286873 21.49057838225173 37 21.490011923947307 25.15528038269923 29.870196079542076 23.48451161381139 38 22.094139705611617 25.781783267388146 28.334952459986802 23.789124567013435 39 23.33879021499925 23.795922066666478 28.95451623044657 23.910771487887704 40 24.350767975846217 22.893695602300955 30.916019724078158 21.83951669777467 41 21.5676167116529 23.888962843167523 30.344463294918018 24.198957150261563 42 21.35760229528905 23.86106477167482 31.905763996476626 22.8755689365595 43 21.94586924442959 23.76929852635872 30.608999323082326 23.67583290612936 44 22.179250065850777 23.690985665772608 29.946243106910508 24.183521161466107 45 22.401018492031348 23.23427865783369 28.67298645314965 25.69171639698531 46 23.620319992296167 24.40628088967941 28.851420819042062 23.121978298982356 47 21.05185642547816 24.68356222969318 31.451039592603188 22.813541752225472 48 21.119831422008605 24.731286341840594 29.890022120196786 24.258860115954015 49 22.197235117016124 23.042815750939614 31.46831657088801 23.291632561156256 50 21.550339733368077 23.621311294328905 30.734753066663643 24.093595905639376 51 21.65088608240269 22.609758377210248 29.57167255311255 26.167682987274514 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 200.0 1 598.0 2 996.0 3 3136.0 4 5276.0 5 3409.0 6 1542.0 7 1532.5 8 1523.0 9 1579.0 10 1635.0 11 1634.0 12 1633.0 13 1623.0 14 1613.0 15 1565.5 16 1518.0 17 1492.5 18 1467.0 19 1608.5 20 1750.0 21 1870.5 22 1991.0 23 2419.0 24 2847.0 25 3444.0 26 4781.5 27 5522.0 28 6511.0 29 7500.0 30 8889.0 31 10278.0 32 12838.0 33 15398.0 34 17248.5 35 19099.0 36 20995.5 37 22892.0 38 24330.5 39 25769.0 40 29090.0 41 32411.0 42 35775.0 43 39139.0 44 43743.0 45 48347.0 46 58598.0 47 68849.0 48 69128.5 49 69408.0 50 68574.5 51 67741.0 52 60882.5 53 54024.0 54 49011.5 55 43999.0 56 40131.5 57 36264.0 58 32294.0 59 28324.0 60 25880.0 61 23436.0 62 20727.5 63 18019.0 64 15844.5 65 13670.0 66 11888.5 67 10107.0 68 8452.0 69 6797.0 70 5521.5 71 4246.0 72 3606.0 73 2966.0 74 2370.0 75 1544.0 76 1314.0 77 900.5 78 487.0 79 344.0 80 201.0 81 139.5 82 78.0 83 52.0 84 26.0 85 20.5 86 15.0 87 9.0 88 3.0 89 4.0 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 706142.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.62845862430135 #Duplication Level Percentage of deduplicated Percentage of total 1 71.8729631481886 24.888499305829846 2 9.704527733022195 6.72105674142688 3 3.8830707097492736 4.033942602233676 4 2.1565986328785454 2.987187461114382 5 1.482078438879796 2.5661045949359074 6 1.1482161898513574 2.38565740932124 7 0.9031784676280143 2.1892974737631614 8 0.8148204620726317 2.2572781325692985 9 0.7057167648940926 2.1994095414249797 >10 7.24266963546537 44.02608208042964 >50 0.05202887528920852 1.2039544788454866 >100 0.029968632071060448 2.2144806136790374 >500 0.0016649240039478027 0.3975226199249404 >1k 0.002497386005921704 1.929526944501515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2944 0.41691331205338306 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTC 2797 0.3960959693659349 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCG 2456 0.34780539891409945 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGC 2449 0.3468140968813638 No Hit GCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 1643 0.23267274854066178 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 1098 0.1554928045633881 TruSeq Adapter, Index 21 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTG 815 0.11541587952564783 No Hit CTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGCT 783 0.11088421309028496 Illumina Paired End PCR Primer 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11669041071059362 0.0 2 0.0 0.0 0.0 0.6116333541978809 0.0 3 0.0 0.0 0.0 0.9122810992689856 0.0 4 0.0 0.0 0.0 1.3027124855907168 0.0 5 0.0 0.0 0.0 2.5670474210569547 0.0 6 0.0 0.0 0.0 3.5024116962310696 0.0 7 0.0 0.0 0.0 4.290213583103681 0.0 8 0.0 0.0 0.0 5.440265555653112 0.0 9 0.0 0.0 0.0 6.013521359726514 0.0 10 1.4161457610508934E-4 0.0 0.0 7.360984051366439 0.0 11 1.4161457610508934E-4 0.0 0.0 8.463311911768454 0.0 12 1.4161457610508934E-4 0.0 0.0 9.762059189228228 0.0 13 1.4161457610508934E-4 0.0 0.0 10.173024689085198 0.0 14 1.4161457610508934E-4 0.0 0.0 10.377374522404843 0.0 15 1.4161457610508934E-4 0.0 0.0 10.701671901685497 0.0 16 1.4161457610508934E-4 0.0 0.0 11.264023383398806 0.0 17 1.4161457610508934E-4 0.0 0.0 11.93612616159356 0.0 18 1.4161457610508934E-4 0.0 0.0 12.710757892888399 0.0 19 1.4161457610508934E-4 0.0 0.0 13.204851148919056 0.0 20 1.4161457610508934E-4 0.0 0.0 13.639183053833365 0.0 21 1.4161457610508934E-4 0.0 0.0 14.153385579670944 0.0 22 1.4161457610508934E-4 0.0 0.0 14.711063780372786 0.0 23 1.4161457610508934E-4 0.0 0.0 15.246508492626129 0.0 24 1.4161457610508934E-4 0.0 0.0 15.686363366008537 0.0 25 1.4161457610508934E-4 0.0 0.0 16.080051887580684 0.0 26 1.4161457610508934E-4 0.0 0.0 16.483228585751874 0.0 27 1.4161457610508934E-4 0.0 0.0 16.898725752044207 0.0 28 1.4161457610508934E-4 0.0 0.0 17.29482172141014 0.0 29 1.4161457610508934E-4 0.0 0.0 17.71881576226878 0.0 30 1.4161457610508934E-4 0.0 0.0 18.25624307858759 0.0 31 1.4161457610508934E-4 0.0 0.0 18.70615258687346 0.0 32 1.4161457610508934E-4 0.0 0.0 19.18693407275024 0.0 33 1.4161457610508934E-4 0.0 0.0 19.634294518666216 0.0 34 1.4161457610508934E-4 0.0 0.0 20.09624126592102 0.0 35 1.4161457610508934E-4 0.0 0.0 20.5743320748518 0.0 36 1.4161457610508934E-4 0.0 0.0 20.994927365883914 0.0 37 1.4161457610508934E-4 0.0 0.0 21.423877916906232 0.0 38 1.4161457610508934E-4 0.0 0.0 21.88016008111683 0.0 39 4.24843728315268E-4 0.0 0.0 22.464603436702532 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCC 25 3.889271E-5 45.000004 23 CGGTAAT 20 7.031436E-4 45.0 6 TATGCGG 80 0.0 42.1875 2 TATACGG 65 0.0 41.538464 2 CGTTTTT 1375 0.0 40.745453 1 TACGGGA 315 0.0 40.714287 4 CGTTATT 175 0.0 39.857143 1 AGGGCGC 115 0.0 39.130432 6 ATTACGG 35 6.244867E-6 38.571426 2 CGTAAGG 130 0.0 38.076927 2 CGATGAA 405 0.0 37.777775 19 GTTGACG 30 1.1394762E-4 37.499996 1 ACGATAG 30 1.1394762E-4 37.499996 1 AGGTTCG 30 1.1394762E-4 37.499996 1 ACTACCG 30 1.1394762E-4 37.499996 1 CGAATAT 30 1.1394762E-4 37.499996 14 CCGACGG 30 1.1394762E-4 37.499996 2 CCCATCG 30 1.1394762E-4 37.499996 40 AGGGTAC 175 0.0 37.285713 6 TTACGGG 145 0.0 37.24138 3 >>END_MODULE