SRR2936431.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936431.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152086
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC	660	0.43396499349052503	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGC	551	0.36229501729284747	No Hit
CCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC	504	0.3313914495745828	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTC	495	0.3254737451178938	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCG	477	0.31363833620451587	No Hit
CTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGCT	377	0.2478860644635272	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	315	0.20711965598411425	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	223	0.1466275659824047	No Hit
TCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC	181	0.11901161185118944	No Hit
ACTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC	153	0.10060097576371264	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGTAG	25	3.8748018E-5	45.000004	1
CTAGATA	25	3.8748018E-5	45.000004	19
TTAGCTA	20	7.0139684E-4	45.000004	24
CAACGAG	25	3.8748018E-5	45.000004	14
ACGCAGG	25	3.8748018E-5	45.000004	2
TAGACAC	25	3.8748018E-5	45.000004	25
GACACCA	25	3.8748018E-5	45.000004	27
AGGGTAC	20	7.0139684E-4	45.000004	6
AGTATCG	25	3.8748018E-5	45.000004	34
CTTGCGG	20	7.0139684E-4	45.000004	2
ACAATTA	20	7.0139684E-4	45.000004	43
AATCTTC	20	7.0139684E-4	45.000004	35
CGGGATA	40	6.7484507E-9	45.000004	6
ATAAGCG	20	7.0139684E-4	45.000004	32
AACGAGC	25	3.8748018E-5	45.000004	15
CATCGTT	20	7.0139684E-4	45.000004	36
GGCATTA	20	7.0139684E-4	45.000004	8
CATAACA	30	2.1530504E-6	45.000004	27
TAGATAC	25	3.8748018E-5	45.000004	20
TTACGGG	20	7.0139684E-4	45.000004	3