##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936431.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 152086 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01852241494944 33.0 31.0 34.0 30.0 34.0 2 32.12272003997738 33.0 31.0 34.0 30.0 34.0 3 32.080263798114224 33.0 31.0 34.0 30.0 34.0 4 35.72993569427824 37.0 35.0 37.0 33.0 37.0 5 32.139749878358295 37.0 35.0 37.0 0.0 37.0 6 33.88950330733927 37.0 35.0 37.0 17.0 37.0 7 35.51564246544718 37.0 35.0 37.0 32.0 37.0 8 35.7482477019581 37.0 35.0 37.0 35.0 37.0 9 37.656990124008786 39.0 37.0 39.0 35.0 39.0 10 37.32123929881777 39.0 37.0 39.0 34.0 39.0 11 37.24567678813303 39.0 37.0 39.0 34.0 39.0 12 36.97919598122115 39.0 35.0 39.0 34.0 39.0 13 36.719809844430124 39.0 35.0 39.0 33.0 39.0 14 37.846290914351094 40.0 36.0 41.0 33.0 41.0 15 38.076529069079335 40.0 36.0 41.0 33.0 41.0 16 38.07537840432387 40.0 36.0 41.0 34.0 41.0 17 38.08145391423274 40.0 36.0 41.0 34.0 41.0 18 38.036071696277105 40.0 36.0 41.0 34.0 41.0 19 37.901831858290706 40.0 36.0 41.0 34.0 41.0 20 37.98350933024736 40.0 36.0 41.0 34.0 41.0 21 37.893645700458954 40.0 35.0 41.0 34.0 41.0 22 37.97039832726221 40.0 35.0 41.0 34.0 41.0 23 37.99458858803572 40.0 35.0 41.0 34.0 41.0 24 37.94601738490065 40.0 35.0 41.0 34.0 41.0 25 37.691740199623894 40.0 35.0 41.0 34.0 41.0 26 37.71533211472456 40.0 35.0 41.0 34.0 41.0 27 37.67611745985824 40.0 35.0 41.0 34.0 41.0 28 37.638369080651735 40.0 35.0 41.0 33.0 41.0 29 37.603730783898584 40.0 35.0 41.0 33.0 41.0 30 37.46885314887629 39.0 35.0 41.0 33.0 41.0 31 37.43600988914167 39.0 35.0 41.0 33.0 41.0 32 37.35439159422958 39.0 35.0 41.0 33.0 41.0 33 37.287061267966806 39.0 35.0 41.0 33.0 41.0 34 37.18313980248018 39.0 35.0 41.0 33.0 41.0 35 37.18889970148469 39.0 35.0 41.0 33.0 41.0 36 37.109365753586786 39.0 35.0 41.0 33.0 41.0 37 37.039786699630476 39.0 35.0 41.0 33.0 41.0 38 36.94079007929724 39.0 35.0 41.0 32.0 41.0 39 36.89409281590679 39.0 35.0 41.0 32.0 41.0 40 36.85303709743172 39.0 35.0 41.0 32.0 41.0 41 36.74533487631998 39.0 35.0 41.0 32.0 41.0 42 36.774765593151244 39.0 35.0 41.0 32.0 41.0 43 36.68906408216404 39.0 35.0 41.0 32.0 41.0 44 36.64698920347698 39.0 35.0 41.0 32.0 41.0 45 36.62576437015899 39.0 35.0 41.0 32.0 41.0 46 36.50670673171758 39.0 35.0 41.0 31.0 41.0 47 36.4268637481425 38.0 35.0 41.0 31.0 41.0 48 36.41617900398459 38.0 35.0 41.0 31.0 41.0 49 36.39837328879713 38.0 35.0 41.0 31.0 41.0 50 36.287751666820085 38.0 35.0 40.0 31.0 41.0 51 35.296989860999695 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 7.0 10 7.0 11 9.0 12 4.0 13 6.0 14 5.0 15 12.0 16 14.0 17 15.0 18 35.0 19 63.0 20 122.0 21 204.0 22 332.0 23 446.0 24 638.0 25 861.0 26 1100.0 27 1229.0 28 1400.0 29 1667.0 30 2048.0 31 2869.0 32 3926.0 33 6098.0 34 11370.0 35 16687.0 36 10990.0 37 16420.0 38 27241.0 39 46222.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.55627736938311 19.980142813934222 23.945662322633247 12.517917494049419 2 32.53685414831082 25.07462882842602 24.34083347579659 18.047683547466566 3 32.797890667122545 24.066646502636665 26.430440671725208 16.705022158515575 4 28.80278263614008 25.43823889115369 25.922833133884776 19.836145338821456 5 23.136909380219087 36.441224044290735 22.522125639440844 17.89974093604934 6 24.45129729232145 36.927133332456634 23.916073800349803 14.705495574872113 7 78.70612679668082 5.780939731467722 10.494062569861788 5.018870901989664 8 78.74886577331247 6.0932630222374184 9.308549110371764 5.84932209407835 9 73.30523519587602 7.0354930762857855 11.619083939350103 8.040187788488092 10 42.39048959141538 25.128545691253635 17.854371868548057 14.626592848782927 11 33.48500190681588 24.28691661296898 24.413160974711676 17.814920505503466 12 31.103454624357273 21.470746814302437 28.505582367870808 18.920216193469486 13 24.409215838407217 28.67259313809292 29.007929723971966 17.9102612995279 14 18.538195494654342 32.64403035124864 28.178793577318096 20.638980576778927 15 17.27509435450995 25.610509843115082 38.084373315098034 19.030022487276934 16 20.183317333613875 23.51893007903423 34.45813552858251 21.83961705876938 17 19.674394750338625 22.94622779217022 29.25187065213103 28.127506805360124 18 22.038846442144578 23.362439672290677 32.05423247373197 22.544481411832777 19 23.619531054797942 25.749247136488567 28.7975224544008 21.833699354312692 20 26.490932761726917 24.829372854832137 27.848717173178333 20.830977210262613 21 22.292650211064792 27.38910879370882 29.171652880607024 21.146588114619362 22 20.73892402982523 24.813592309614297 27.14516786554976 27.302315795010717 23 19.752639953710403 28.60552582091711 27.381876043817314 24.25995818155517 24 21.470746814302437 23.667530213168863 31.319122075667714 23.54260089686099 25 18.588167221177493 26.435043330747078 30.342043317596623 24.634746130478806 26 19.310127164893547 28.62590902515682 29.023710269189802 23.040253540759835 27 20.191207606222793 29.96857041410781 27.18527675131176 22.65494522835764 28 18.02532777507463 26.821009165866684 31.933905816445957 23.219757242612733 29 19.193745643911996 24.933261444182897 31.266520258274923 24.60647265363018 30 20.75075943873861 27.886853490788106 28.40629643754192 22.956090632931367 31 24.39409281590679 27.378588430230266 24.100837683941982 24.126481069920967 32 24.62356824428284 28.249806030798364 23.94434727719843 23.18227844772037 33 22.825901134884212 27.853319832200203 24.61041778993464 24.710361242980944 34 20.471312283839406 28.409584051128967 26.51986376129295 24.599239903738674 35 18.760438173138883 27.348342385229408 26.55339741988086 27.337822021750853 36 23.270386491853294 29.299212287784542 24.589377062977526 22.841024157384638 37 20.66922662177978 29.426771694962063 27.35952027142538 22.544481411832777 38 19.6263955919677 28.92179424799127 24.223794432097627 27.2280157279434 39 20.012361427087306 26.625067396078535 26.94528095945715 26.41729021737701 40 21.522033586260406 25.121970464079535 26.915034914456292 26.440961035203763 41 17.740620438436146 27.630419630998247 26.90319950554292 27.725760425022685 42 21.712057651591863 26.672409031732048 26.44885130781269 25.166682008863404 43 22.59379561563852 26.690162145102114 25.78738345409834 24.92865878516103 44 20.946701208526754 26.530384124771512 26.850597688150124 25.672316978551606 45 19.75855765816709 27.00117039043699 25.283063529844956 27.957208421550966 46 21.809371013768526 27.052457162394962 25.879436634535725 25.25873518930079 47 19.031995055429167 27.475901792406926 28.553581526241732 24.938521625922174 48 20.15504385676525 25.265967939192297 28.17156082742659 26.40742737661586 49 21.337269702668227 23.355864445116577 30.068513867154113 25.238351985061087 50 19.46793261707192 25.191667872124984 29.02765540549426 26.312744105308838 51 19.05829596412556 25.542785003221862 25.91823047486291 29.48068855778967 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 59.0 1 188.5 2 318.0 3 472.0 4 626.0 5 446.0 6 266.0 7 264.5 8 263.0 9 300.0 10 337.0 11 343.5 12 350.0 13 312.0 14 274.0 15 297.0 16 320.0 17 319.5 18 319.0 19 303.5 20 288.0 21 320.0 22 352.0 23 494.5 24 637.0 25 622.0 26 853.5 27 1100.0 28 1320.5 29 1541.0 30 1866.5 31 2192.0 32 2200.0 33 2208.0 34 2573.5 35 2939.0 36 3485.5 37 4032.0 38 4561.0 39 5090.0 40 5758.0 41 6426.0 42 8173.0 43 9920.0 44 11238.5 45 12557.0 46 14272.0 47 15987.0 48 16743.0 49 17499.0 50 17002.0 51 16505.0 52 14070.0 53 11635.0 54 10300.5 55 8966.0 56 7700.5 57 6435.0 58 6020.0 59 5605.0 60 5270.0 61 4935.0 62 4328.5 63 3722.0 64 3374.5 65 3027.0 66 2360.5 67 1694.0 68 1400.5 69 1107.0 70 983.0 71 859.0 72 663.0 73 467.0 74 404.5 75 258.5 76 175.0 77 113.5 78 52.0 79 43.5 80 35.0 81 25.5 82 16.0 83 8.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 152086.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.61828176163486 #Duplication Level Percentage of deduplicated Percentage of total 1 73.87158837450836 28.527938140262748 2 10.4030102327482 8.034927606748814 3 3.7083070846032045 4.296253435556198 4 1.963121243593891 3.0324947726943963 5 1.2326971208690174 2.3802322370237894 6 0.8972809153286909 2.079086832450061 7 0.6725350314133451 1.8180503136383364 8 0.5669725707864403 1.7516405191799378 9 0.5652699504537484 1.964677879620741 >10 6.0545179030527985 42.12024775455992 >50 0.03745764731922429 0.9520928948095155 >100 0.02213406432499617 1.9147061530975895 >500 0.005107860998076039 1.1276514603579555 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 660 0.43396499349052503 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGC 551 0.36229501729284747 No Hit CCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 504 0.3313914495745828 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTC 495 0.3254737451178938 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCG 477 0.31363833620451587 No Hit CTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGCT 377 0.2478860644635272 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 315 0.20711965598411425 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 223 0.1466275659824047 No Hit TCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 181 0.11901161185118944 No Hit ACTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 153 0.10060097576371264 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25709138250726565 0.0 2 0.0 0.0 0.0 1.280196730797049 0.0 3 0.0 0.0 0.0 1.6957510882000972 0.0 4 0.0 0.0 0.0 2.25924805702037 0.0 5 0.0 0.0 0.0 3.8379601015215075 0.0 6 0.0 0.0 0.0 4.732190997198953 0.0 7 0.0 0.0 0.0 5.6770511421169605 0.0 8 0.0 0.0 0.0 7.29850216324974 0.0 9 0.0 0.0 0.0 7.93695672185474 0.0 10 0.0 0.0 0.0 9.490682903094301 0.0 11 0.0 0.0 0.0 11.082545401943637 0.0 12 0.0 0.0 0.0 12.73950264981655 0.0 13 6.575227174098865E-4 0.0 0.0 13.281958891679707 0.0 14 6.575227174098865E-4 0.0 0.0 13.502229002012019 0.0 15 6.575227174098865E-4 0.0 0.0 13.96052233604671 0.0 16 6.575227174098865E-4 0.0 0.0 14.874478913246453 0.0 17 6.575227174098865E-4 0.0 0.0 15.944268374472339 0.0 18 6.575227174098865E-4 0.0 0.0 17.26325894559657 0.0 19 6.575227174098865E-4 0.0 0.0 17.95168523072472 0.0 20 6.575227174098865E-4 0.0 0.0 18.54148310824139 0.0 21 6.575227174098865E-4 0.0 0.0 19.28316873347974 0.0 22 6.575227174098865E-4 0.0 0.0 20.003156109043566 0.0 23 6.575227174098865E-4 0.0 0.0 20.80533382428363 0.0 24 6.575227174098865E-4 0.0 0.0 21.353707770603474 0.0 25 0.001315045434819773 0.0 0.0 21.875123285509513 0.0 26 0.001315045434819773 0.0 0.0 22.349197164762042 0.0 27 0.001315045434819773 0.0 0.0 22.83773654379759 0.0 28 0.001315045434819773 0.0 0.0 23.311152900332708 0.0 29 0.001315045434819773 0.0 0.0 23.80560998382494 0.0 30 0.001315045434819773 0.0 0.0 24.407243270254988 0.0 31 0.001315045434819773 0.0 0.0 24.95693226200965 0.0 32 0.001315045434819773 0.0 0.0 25.454019436371528 0.0 33 0.001315045434819773 0.0 0.0 25.89455965703615 0.0 34 0.001315045434819773 0.0 0.0 26.373236195310547 0.0 35 0.001315045434819773 0.0 0.0 26.958431413805346 0.0 36 0.001315045434819773 0.0 0.0 27.444340701971253 0.0 37 0.001315045434819773 0.0 0.0 27.92433228568047 0.0 38 0.001315045434819773 0.0 0.0 28.37670791525847 0.0 39 0.001315045434819773 0.0 0.0 28.84880922635877 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTAG 25 3.8748018E-5 45.000004 1 CTAGATA 25 3.8748018E-5 45.000004 19 TTAGCTA 20 7.0139684E-4 45.000004 24 CAACGAG 25 3.8748018E-5 45.000004 14 ACGCAGG 25 3.8748018E-5 45.000004 2 TAGACAC 25 3.8748018E-5 45.000004 25 GACACCA 25 3.8748018E-5 45.000004 27 AGGGTAC 20 7.0139684E-4 45.000004 6 AGTATCG 25 3.8748018E-5 45.000004 34 CTTGCGG 20 7.0139684E-4 45.000004 2 ACAATTA 20 7.0139684E-4 45.000004 43 AATCTTC 20 7.0139684E-4 45.000004 35 CGGGATA 40 6.7484507E-9 45.000004 6 ATAAGCG 20 7.0139684E-4 45.000004 32 AACGAGC 25 3.8748018E-5 45.000004 15 CATCGTT 20 7.0139684E-4 45.000004 36 GGCATTA 20 7.0139684E-4 45.000004 8 CATAACA 30 2.1530504E-6 45.000004 27 TAGATAC 25 3.8748018E-5 45.000004 20 TTACGGG 20 7.0139684E-4 45.000004 3 >>END_MODULE