##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936430.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 192899 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.911565119570344 33.0 31.0 34.0 30.0 34.0 2 32.02597214086128 33.0 31.0 34.0 30.0 34.0 3 32.00843446570485 33.0 31.0 34.0 30.0 34.0 4 35.65911176315066 37.0 35.0 37.0 33.0 37.0 5 31.70013323034334 37.0 35.0 37.0 0.0 37.0 6 33.64789864125786 37.0 35.0 37.0 17.0 37.0 7 35.378856292671294 37.0 35.0 37.0 32.0 37.0 8 35.646250110161276 37.0 35.0 37.0 33.0 37.0 9 37.60615140565788 39.0 37.0 39.0 35.0 39.0 10 37.226750786681116 39.0 37.0 39.0 34.0 39.0 11 37.19494139420111 39.0 37.0 39.0 34.0 39.0 12 36.983789444216924 39.0 35.0 39.0 33.0 39.0 13 36.73757769610003 39.0 35.0 39.0 33.0 39.0 14 37.88365414024956 40.0 36.0 41.0 33.0 41.0 15 38.02912404937299 40.0 36.0 41.0 33.0 41.0 16 38.07186662450298 40.0 36.0 41.0 34.0 41.0 17 38.07235392614788 40.0 36.0 41.0 34.0 41.0 18 38.04493543253205 40.0 36.0 41.0 34.0 41.0 19 37.93120752310795 40.0 36.0 41.0 34.0 41.0 20 37.91017579147637 40.0 36.0 41.0 34.0 41.0 21 37.90676467996205 40.0 36.0 41.0 34.0 41.0 22 37.98927936381215 40.0 36.0 41.0 34.0 41.0 23 37.97961627587494 40.0 36.0 41.0 34.0 41.0 24 37.983250301971495 40.0 35.0 41.0 34.0 41.0 25 37.782326502470205 40.0 35.0 41.0 34.0 41.0 26 37.797028496778104 40.0 35.0 41.0 34.0 41.0 27 37.703057040212755 40.0 35.0 41.0 33.0 41.0 28 37.71538991907682 40.0 36.0 41.0 33.0 41.0 29 37.69394346264107 40.0 36.0 41.0 33.0 41.0 30 37.56459598027983 40.0 36.0 41.0 33.0 41.0 31 37.54411375901378 40.0 35.0 41.0 33.0 41.0 32 37.413833145843164 40.0 35.0 41.0 33.0 41.0 33 37.347762300478486 40.0 35.0 41.0 33.0 41.0 34 37.24902669272521 40.0 35.0 41.0 33.0 41.0 35 37.222173261655065 40.0 35.0 41.0 33.0 41.0 36 37.11686426575565 39.0 35.0 41.0 33.0 41.0 37 36.9377238865935 39.0 35.0 41.0 32.0 41.0 38 36.82372122198664 39.0 35.0 41.0 32.0 41.0 39 36.818511241634226 39.0 35.0 41.0 31.0 41.0 40 36.687219736753434 39.0 35.0 41.0 31.0 41.0 41 36.64148595897335 39.0 35.0 41.0 31.0 41.0 42 36.61629661117994 39.0 35.0 41.0 31.0 41.0 43 36.53675239373973 39.0 35.0 41.0 31.0 41.0 44 36.508411137434614 39.0 35.0 41.0 31.0 41.0 45 36.588898853804324 39.0 35.0 41.0 31.0 41.0 46 36.512895349379725 39.0 35.0 41.0 31.0 41.0 47 36.413796857422795 39.0 35.0 41.0 31.0 41.0 48 36.37407658930321 39.0 35.0 41.0 31.0 41.0 49 36.35795934660107 39.0 35.0 41.0 31.0 41.0 50 36.18771481448841 38.0 35.0 40.0 31.0 41.0 51 35.1481708044106 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 8.0 11 3.0 12 5.0 13 4.0 14 4.0 15 3.0 16 6.0 17 13.0 18 35.0 19 88.0 20 229.0 21 381.0 22 555.0 23 725.0 24 987.0 25 1144.0 26 1447.0 27 1523.0 28 1818.0 29 2131.0 30 2741.0 31 3538.0 32 5103.0 33 7775.0 34 13546.0 35 20130.0 36 14019.0 37 21108.0 38 36092.0 39 57684.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.57255351245989 19.64966122167559 23.793280421360404 10.98450484450412 2 30.458944836416986 28.154630143235583 24.95865712108409 16.427767899263344 3 30.23914069020576 27.616006303817027 25.954515057102423 16.1903379488748 4 27.544984681102548 24.268658728142707 30.404512205869395 17.781844384885353 5 25.217860123691672 36.398840844172334 21.450603683793073 16.932695348342914 6 22.044178559764436 37.68811657914245 24.749221094977162 15.518483766115947 7 76.73601210996428 5.172655120036911 13.20898501288239 4.882347757116419 8 77.19480142457971 7.841409234884576 9.11461438369302 5.8491749568427 9 72.86714809304351 5.409048258415026 11.16335491630335 10.560448732238115 10 40.73167823576068 24.604585819522136 18.53405149845256 16.129684446264626 11 33.139103883379384 23.941026132846723 24.96332277513103 17.956547208642863 12 28.103826354724493 21.648116371780052 30.459463242422203 19.788594031073256 13 23.388923737292572 27.779304195459797 32.380157491744384 16.451614575503243 14 19.067491277818963 34.666846380748474 27.6699205283594 18.595741813073165 15 15.869963037651827 25.41848324770994 40.49061944333563 18.2209342713026 16 16.917661574191676 24.874675348239233 35.11423076324916 23.093432314319926 17 17.999574907075726 24.448027205947152 29.655415528333478 27.89698235864364 18 19.83214013551133 24.978356549282267 32.25574005049274 22.933763264713658 19 22.117792212504988 25.956070275118066 28.626898013986597 23.29923949839035 20 23.719148362614632 26.20542356362656 29.568841725462548 20.506586348296256 21 20.34484367466913 30.179005593600795 29.778277751569476 19.697872980160604 22 18.353127802632464 25.057672668080187 29.036438758106577 27.552760771180772 23 17.474948029797975 28.928610309021817 28.867956806411645 24.728484854768556 24 20.90420375429629 25.123510230742514 30.078434828589057 23.893851186372142 25 17.316315792202136 29.20803114583279 29.68548307663596 23.79016998532911 26 17.369193204734085 26.88971949051058 31.883524538748258 23.85756276600708 27 19.977293816971574 30.41280670195284 28.59423843565804 21.01566104541755 28 17.42207061726603 26.539277030985126 34.33040088336383 21.708251468385008 29 18.724306502366524 23.704114588463394 33.42474559225294 24.146833316917142 30 20.367653538898594 30.36303972545218 29.77309369151732 19.496213044131903 31 26.14010440696945 26.605632999652666 24.384263267305688 22.869999326072193 32 23.605099041467295 29.928097087076655 24.66938657017403 21.797417301282017 33 23.93584207279457 28.335035433050454 24.16445912109446 23.56466337306051 34 23.606654259482944 25.013089751631686 28.48278114453678 22.897474844348597 35 19.61544642533139 28.710879786831452 26.68857796048709 24.985095827350065 36 27.44804275812731 26.793814379545772 27.020876209830014 18.737266652496903 37 22.922358332598925 27.815074209819645 28.03954401007781 21.223023447503618 38 21.92805561459624 31.042151592284046 22.765799719023946 24.263993074095772 39 25.2188969357021 25.43040658582989 25.900600832560045 23.45009564590796 40 22.822824379597613 27.458929284236827 27.557944831232923 22.160301504932633 41 22.10172162634332 26.28370287041405 25.690127994442687 25.924447508799943 42 24.22666784172028 25.30184189653653 27.77723057143894 22.694259690304253 43 25.6460634839994 24.90629811455736 26.396196973545745 23.0514414278975 44 22.184666587177745 26.06804597224454 27.761678391282484 23.985609049295228 45 21.16703559894038 25.614440717681276 25.99339550749356 27.225128175884787 46 25.55275040306067 27.11626291478961 26.217865307751726 21.113121374398 47 20.837329379623533 25.706198580604354 30.868485580536962 22.587986459235143 48 22.62479328560542 24.98665104536571 27.887132644544554 24.501423024484314 49 23.387886925282142 20.951897106776084 32.13080420323589 23.52941176470588 50 22.173261655063012 22.67974432215823 30.347487545295728 24.799506477483035 51 20.786007185107234 23.934286854778925 25.863794006189767 29.415911953924073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 134.0 2 188.0 3 489.5 4 791.0 5 538.0 6 285.0 7 298.0 8 311.0 9 338.0 10 365.0 11 368.0 12 371.0 13 405.5 14 440.0 15 422.5 16 405.0 17 361.0 18 317.0 19 324.0 20 331.0 21 369.0 22 407.0 23 469.5 24 532.0 25 628.0 26 1050.0 27 1376.0 28 1680.5 29 1985.0 30 2254.5 31 2524.0 32 2715.5 33 2907.0 34 3188.0 35 3469.0 36 4293.0 37 5117.0 38 5678.5 39 6240.0 40 7255.0 41 8270.0 42 10201.0 43 12132.0 44 15021.5 45 17911.0 46 23072.5 47 28234.0 48 26562.5 49 24891.0 50 23835.5 51 22780.0 52 19187.5 53 15595.0 54 12938.0 55 10281.0 56 8715.5 57 7150.0 58 6407.5 59 5665.0 60 4755.0 61 3845.0 62 3277.0 63 2709.0 64 2220.0 65 1731.0 66 1359.5 67 988.0 68 755.5 69 523.0 70 471.0 71 419.0 72 361.0 73 303.0 74 225.5 75 110.5 76 73.0 77 55.0 78 37.0 79 25.5 80 14.0 81 18.0 82 22.0 83 16.5 84 11.0 85 6.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 192899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.23089285066278 #Duplication Level Percentage of deduplicated Percentage of total 1 74.06046831227866 29.054582968289104 2 10.973095829589303 8.60968693461345 3 4.103018129922301 4.828951938579257 4 2.099741001109995 3.2949885691475846 5 1.3121729478302235 2.5738858158932914 6 0.891960463026587 2.099544321121416 7 0.7228183307785824 1.9849765939688644 8 0.5391405465405149 1.6920772010222966 9 0.4809979385802632 1.6982980730848787 >10 4.697658438606692 34.79385585202619 >50 0.0726782599503145 1.9398752715151453 >100 0.03832126433743855 3.157092571760351 >500 0.002642845816375073 0.6200135822373366 >1k 0.005285691632750146 3.652170306740833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGC 2075 1.0756924608214662 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC 1904 0.987045033929673 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCG 1752 0.9082473211369682 No Hit GCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC 1314 0.6811854908527261 No Hit CCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC 645 0.33437187336378105 No Hit CTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGCT 551 0.28564170887355556 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCT 477 0.24727966448763344 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 427 0.2213593642268752 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGCAGAGT 387 0.20062312401826865 No Hit TCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC 331 0.1715923877262194 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCT 317 0.16433470365320713 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTC 311 0.16122426762191613 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTA 305 0.15811383159062514 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 290 0.15033774151239768 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGC 237 0.12286222323599397 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTT 231 0.11975178720470298 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCG 226 0.11715975717862717 No Hit ACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC 213 0.11042047911083003 No Hit GAATATGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC 202 0.10471801305346322 No Hit GTCGAAGGGATTCAGTTAGCACTATTGTTGTAATTTGTACTGAAACCCATA 193 0.10005235900652674 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3115620091343138 0.0 2 0.0 0.0 0.0 1.7164422832674093 0.0 3 0.0 0.0 0.0 2.235366694487789 0.0 4 0.0 0.0 0.0 3.0036443942166624 0.0 5 0.0 0.0 0.0 5.609152976428079 0.0 6 0.0 0.0 0.0 6.803042006438603 0.0 7 0.0 0.0 0.0 8.135345439841576 0.0 8 0.0 0.0 0.0 10.101141011617479 0.0 9 0.0 0.0 0.0 10.787510562522357 0.0 10 0.0 0.0 0.0 13.310074183899346 0.0 11 0.0 0.0 0.0 15.239581335310188 0.0 12 0.0 0.0 0.0 17.94306865250727 0.0 13 0.0 0.0 0.0 18.73311940445518 0.0 14 0.0 0.0 0.0 19.084080269985847 0.0 15 0.0 0.0 0.0 19.697354574155387 0.0 16 0.0 0.0 0.0 20.780304719049866 0.0 17 0.0 0.0 0.0 21.958641568903936 0.0 18 0.0 0.0 0.0 23.469276668100925 0.0 19 0.0 0.0 0.0 24.49883099445824 0.0 20 0.0 0.0 0.0 25.253111732046303 0.0 21 0.0 0.0 0.0 26.146843685037247 0.0 22 0.0 0.0 0.0 27.0032504056527 0.0 23 0.0 0.0 0.0 27.95089658318602 0.0 24 0.0 0.0 0.0 28.625861201976164 0.0 25 0.0 0.0 0.0 29.183147657582467 0.0 26 0.0 0.0 0.0 29.706219316844567 0.0 27 0.0 0.0 0.0 30.33815623720185 0.0 28 0.0 0.0 0.0 30.910994872964608 0.0 29 0.0 0.0 0.0 31.490572786795163 0.0 30 0.0 0.0 0.0 32.184718427778265 0.0 31 0.0 0.0 0.0 32.823913032208566 0.0 32 0.0 0.0 0.0 33.40141732201826 0.0 33 0.0 0.0 0.0 34.02972540033904 0.0 34 0.0 0.0 0.0 34.609303314169594 0.0 35 0.0 0.0 0.0 35.23398255045387 0.0 36 0.0 0.0 0.0 35.76483029979419 0.0 37 5.184060052151645E-4 0.0 0.0 36.30293573320753 0.0 38 5.184060052151645E-4 0.0 0.0 36.86540624886599 0.0 39 5.184060052151645E-4 0.0 0.0 37.43306082457659 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAG 30 2.1560809E-6 45.000004 1 AAGCGGC 45 3.8198777E-10 45.000004 22 AAGTGCG 30 2.1560809E-6 45.000004 1 AGCACGG 30 2.1560809E-6 45.000004 2 CCTTATA 20 7.018676E-4 45.0 28 TAATACG 50 2.1827873E-11 45.0 4 CAGCGCG 20 7.018676E-4 45.0 1 CGGCGAA 35 1.2049168E-7 45.0 31 GAAGCGG 35 1.2049168E-7 45.0 2 CGAACGG 25 3.8787002E-5 45.0 2 CGAACCC 20 7.018676E-4 45.0 34 GTATTAG 20 7.018676E-4 45.0 1 CGCGGGT 25 3.8787002E-5 45.0 4 TGAAGCG 20 7.018676E-4 45.0 1 GCGAACC 25 3.8787002E-5 45.0 33 AACCCAT 20 7.018676E-4 45.0 44 TTATGCA 25 3.8787002E-5 45.0 14 CAGCACG 20 7.018676E-4 45.0 1 GGCCGGT 20 7.018676E-4 45.0 9 TTCACGG 20 7.018676E-4 45.0 2 >>END_MODULE