SRR2936429.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936429.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	241015
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG	2480	1.0289815986556852	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC	2266	0.9401904445781383	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC	2051	0.8509843785656495	No Hit
GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	1320	0.5476837541231874	No Hit
CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	634	0.26305416675310667	No Hit
CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT	552	0.22903138808787835	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT	508	0.21077526295043875	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAAGCCAT	456	0.18919984233346474	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	419	0.1738481007406178	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	411	0.17052880526108333	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTA	396	0.1643051262369562	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTC	337	0.1398253220753895	No Hit
GAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT	331	0.13733585046573865	No Hit
TCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	284	0.11783498952347364	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG	272	0.11285604630417194	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC	259	0.10746219114992843	No Hit
GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	252	0.10455780760533577	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAGGG	35	1.2065902E-7	45.000004	3
CATCGAA	35	1.2065902E-7	45.000004	42
ATCGAAT	35	1.2065902E-7	45.000004	43
AGCCGAT	20	7.0221827E-4	45.0	28
CGAAATT	20	7.0221827E-4	45.0	13
CACGGGC	55	1.8189894E-12	45.0	4
TTTCGTC	20	7.0221827E-4	45.0	16
GATCAAC	20	7.0221827E-4	45.0	9
TAACGCC	20	7.0221827E-4	45.0	12
TATGCGG	25	3.881604E-5	45.0	2
TATGCAG	40	6.7757355E-9	45.0	1
GCTTGCG	20	7.0221827E-4	45.0	1
AACGGGC	55	1.8189894E-12	45.0	4
AATGCGG	20	7.0221827E-4	45.0	2
TACGCGG	20	7.0221827E-4	45.0	2
TCGTGGA	20	7.0221827E-4	45.0	1
TACTAGA	20	7.0221827E-4	45.0	30
ATAACGC	20	7.0221827E-4	45.0	11
TAGGCCC	20	7.0221827E-4	45.0	31
CGGTACA	20	7.0221827E-4	45.0	36