##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936429.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241015 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01682882808124 33.0 31.0 34.0 30.0 34.0 2 32.140269277845775 33.0 31.0 34.0 30.0 34.0 3 32.10346244009709 33.0 31.0 34.0 30.0 34.0 4 35.72076841690351 37.0 35.0 37.0 33.0 37.0 5 31.865356927992035 37.0 35.0 37.0 0.0 37.0 6 33.7475592805427 37.0 35.0 37.0 17.0 37.0 7 35.430894342675764 37.0 35.0 37.0 32.0 37.0 8 35.67093334439765 37.0 35.0 37.0 33.0 37.0 9 37.5996307283779 39.0 37.0 39.0 35.0 39.0 10 37.29847934775844 39.0 37.0 39.0 34.0 39.0 11 37.255345103001886 39.0 37.0 39.0 34.0 39.0 12 37.03132170196876 39.0 35.0 39.0 34.0 39.0 13 36.840951807978755 39.0 35.0 39.0 33.0 39.0 14 38.0309980706595 40.0 37.0 41.0 33.0 41.0 15 38.15882828869572 40.0 37.0 41.0 33.0 41.0 16 38.20077588531834 40.0 37.0 41.0 34.0 41.0 17 38.1550733356845 40.0 36.0 41.0 34.0 41.0 18 38.12895462937991 40.0 36.0 41.0 34.0 41.0 19 38.03163703503931 40.0 36.0 41.0 34.0 41.0 20 37.9975146775097 40.0 36.0 41.0 34.0 41.0 21 37.99757276518059 40.0 36.0 41.0 34.0 41.0 22 38.05891749476174 40.0 36.0 41.0 34.0 41.0 23 38.02208576229695 40.0 36.0 41.0 34.0 41.0 24 38.02542165425388 40.0 36.0 41.0 34.0 41.0 25 37.82019791299297 40.0 35.0 41.0 34.0 41.0 26 37.81138518349481 40.0 35.0 41.0 34.0 41.0 27 37.744559467253076 40.0 35.0 41.0 33.0 41.0 28 37.692683028027304 40.0 36.0 41.0 33.0 41.0 29 37.672895877849925 40.0 36.0 41.0 33.0 41.0 30 37.56162894425658 40.0 36.0 41.0 33.0 41.0 31 37.50430056220567 40.0 35.0 41.0 33.0 41.0 32 37.381723129265815 40.0 35.0 41.0 33.0 41.0 33 37.32519137812999 40.0 35.0 41.0 33.0 41.0 34 37.23395639275564 40.0 35.0 41.0 33.0 41.0 35 37.25518328734726 40.0 35.0 41.0 33.0 41.0 36 37.134493703711385 40.0 35.0 41.0 33.0 41.0 37 37.028114432711654 40.0 35.0 41.0 32.0 41.0 38 36.887899093417424 39.0 35.0 41.0 32.0 41.0 39 36.865489699811214 39.0 35.0 41.0 32.0 41.0 40 36.808995290749536 39.0 35.0 41.0 31.0 41.0 41 36.73535672053607 39.0 35.0 41.0 31.0 41.0 42 36.765856896873636 39.0 35.0 41.0 32.0 41.0 43 36.65579320789163 39.0 35.0 41.0 31.0 41.0 44 36.62917245814576 39.0 35.0 41.0 31.0 41.0 45 36.62234715681596 39.0 35.0 41.0 31.0 41.0 46 36.52973466381761 39.0 35.0 41.0 31.0 41.0 47 36.361301163827974 39.0 35.0 41.0 31.0 41.0 48 36.37025911250337 39.0 35.0 41.0 31.0 41.0 49 36.39606663485675 39.0 35.0 41.0 31.0 41.0 50 36.27555131423355 38.0 35.0 41.0 31.0 41.0 51 35.27110760741033 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 12.0 10 24.0 11 5.0 12 9.0 13 5.0 14 9.0 15 8.0 16 15.0 17 26.0 18 59.0 19 107.0 20 198.0 21 434.0 22 740.0 23 1034.0 24 1367.0 25 1554.0 26 1670.0 27 1938.0 28 2145.0 29 2505.0 30 3253.0 31 4308.0 32 6092.0 33 9395.0 34 16014.0 35 23757.0 36 17984.0 37 27174.0 38 44364.0 39 74741.0 40 63.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.287098313382984 18.4905503806817 22.596103976930895 11.62624732900442 2 30.839159388419805 27.42360433997884 24.128373752670996 17.60886251893036 3 31.876439225774327 27.231500114100783 24.697218015476217 16.194842644648674 4 27.975852125386385 24.02837997635002 29.28157998464826 18.714187913615334 5 24.853639814949275 35.2612907910296 21.25261913158932 18.6324502624318 6 23.015165031222125 37.82420181316515 24.049540485032054 15.11109267058067 7 76.52220816131776 5.6934215712714975 12.971806734020705 4.812563533390038 8 76.21475841752589 8.71315063377798 9.021845113374686 6.050245835321453 9 71.2349853743543 6.2734684563201455 10.969026824056593 11.522519345268966 10 42.984876459971375 23.192747339377217 17.810509719312076 16.011866481339336 11 33.13237765284318 22.935501939713294 23.892288861689106 20.039831545754414 12 28.564612161068816 20.258075223533805 29.832168122316038 21.345144493081346 13 25.32456486110823 25.685953156442544 32.21500736468684 16.77447461776238 14 19.07308673734 32.30255378295956 28.092857291039973 20.531502188660458 15 16.772400058087673 24.452419973860547 38.950687716532165 19.824492251519615 16 19.155239300458476 22.343007696616393 33.24481878721242 25.256934215712718 17 19.10047092504616 23.272825342820987 29.927597867352656 27.6991058647802 18 20.814887040225713 23.341700724021326 31.137066157708027 24.706346078044934 19 22.404414662987783 25.14200360973383 27.959255647988712 24.49432607928967 20 24.32421218596353 24.69182416032197 29.182001120262225 21.801962533452272 21 23.086944795967057 27.73146899570566 28.219820343132167 20.96176586519511 22 20.42196543783582 23.573636495653798 28.785345310457856 27.219052756052527 23 20.857208057589776 27.562599838184344 27.64392257743294 23.936269526792938 24 22.206086758085597 23.940003734207416 29.485716656639628 24.36819285106736 25 20.017011389332616 27.692882185756073 28.44885173122005 23.841254693691262 26 19.219550650374458 25.558990104350354 30.528390349148392 24.693068896126796 27 22.837997635001972 26.717839138642823 27.258469389871998 23.185693836483207 28 18.09638404248698 27.200796630915086 31.916270771528744 22.786548555069185 29 20.124473580482544 24.894301184573575 31.367757193535674 23.61346804140821 30 23.501441818973923 26.328236831732465 28.87330664066552 21.297014708628094 31 24.163226355206106 26.44150778997158 23.73005829512686 25.665207559695453 32 24.59307511980582 29.32390100201232 24.843681928510676 21.239341949671182 33 25.27643507665498 25.309213119515384 24.461548036429267 24.95280376740037 34 21.047652635728067 25.822459183038397 27.379208762940067 25.750679418293466 35 22.97118436611829 24.314254299524926 25.820799535298633 26.89376179905815 36 24.79015828890318 27.063045868514408 26.630292720370104 21.51650312221231 37 22.00983341285812 28.006555608572082 27.21033960541875 22.77327137315105 38 21.65176441300334 29.868265460655973 23.04420886666805 25.435761259672635 39 22.228906914507395 26.59295064622534 25.8631205526627 25.315021886604566 40 24.066136962429724 22.061697404725848 27.661763790635437 26.21040184220899 41 19.061054291226686 25.952326618675187 26.599174325249464 28.387444764848663 42 21.37460324046221 25.55857519241541 27.880422380349774 25.186399186772608 43 23.34958405078522 26.966371387672964 25.57019272659378 24.113851834948033 44 22.12185963529241 25.232039499616203 27.942244258656103 24.703856606435284 45 21.3268883679439 25.02707300375495 26.27471319212497 27.371325436176168 46 25.349044665269798 25.37767358878078 26.63485675165446 22.63842499429496 47 20.126133228222308 25.02375370827542 30.815094496193186 24.035018567309088 48 21.189552517478166 25.394684978113396 27.35721843038815 26.05854407402029 49 21.059270169906437 23.401033130718005 31.06072236167873 24.478974337696823 50 21.84967740597058 23.738356533825698 28.95628902765388 25.45567703254984 51 20.740202891936185 23.812210858245336 25.768520631495967 29.679065618322507 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 105.0 1 278.0 2 451.0 3 705.0 4 959.0 5 690.0 6 421.0 7 446.0 8 471.0 9 455.0 10 439.0 11 452.5 12 466.0 13 445.0 14 424.0 15 400.5 16 377.0 17 398.5 18 420.0 19 418.0 20 416.0 21 503.0 22 590.0 23 629.5 24 669.0 25 794.5 26 1035.5 27 1151.0 28 1552.5 29 1954.0 30 2188.5 31 2423.0 32 3067.5 33 3712.0 34 4109.0 35 4506.0 36 5286.5 37 6067.0 38 6641.5 39 7216.0 40 8626.5 41 10037.0 42 11716.0 43 13395.0 44 15632.5 45 17870.0 46 24502.0 47 31134.0 48 28965.0 49 26796.0 50 26378.0 51 25960.0 52 22422.5 53 18885.0 54 16285.0 55 13685.0 56 12416.5 57 11148.0 58 10264.5 59 9381.0 60 8733.5 61 8086.0 62 7307.5 63 6529.0 64 5671.0 65 4813.0 66 3984.5 67 3156.0 68 2770.5 69 2385.0 70 1803.5 71 1222.0 72 1242.0 73 1262.0 74 903.0 75 428.0 76 312.0 77 227.0 78 142.0 79 110.0 80 78.0 81 45.0 82 12.0 83 12.0 84 12.0 85 8.5 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 2.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.809866605812914 #Duplication Level Percentage of deduplicated Percentage of total 1 73.39237398238316 25.54778748210692 2 10.382969593668427 7.228595730556189 3 4.007294658927018 4.1848017758230815 4 2.0656280915884953 2.876169533016617 5 1.2682217480958795 2.207331493890422 6 0.8617709810839482 1.7998879737775655 7 0.6722528815094699 1.6380723191502606 8 0.5482913572594967 1.5268759205858555 9 0.5029977233989297 1.575835528908989 >10 6.188540710633276 43.20021575420617 >50 0.06436463759133222 1.5235566251063213 >100 0.03695006972835739 2.6201688691575216 >500 0.003575813199518457 0.7028608177914237 >1k 0.004767750932691276 3.36784017592266 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG 2480 1.0289815986556852 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC 2266 0.9401904445781383 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC 2051 0.8509843785656495 No Hit GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 1320 0.5476837541231874 No Hit CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 634 0.26305416675310667 No Hit CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT 552 0.22903138808787835 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT 508 0.21077526295043875 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAAGCCAT 456 0.18919984233346474 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 419 0.1738481007406178 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 411 0.17052880526108333 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTA 396 0.1643051262369562 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTC 337 0.1398253220753895 No Hit GAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 331 0.13733585046573865 No Hit TCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 284 0.11783498952347364 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG 272 0.11285604630417194 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC 259 0.10746219114992843 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 252 0.10455780760533577 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.23981909839636537 0.0 2 0.0 0.0 0.0 1.294110325083501 0.0 3 0.0 0.0 0.0 1.6434661743045038 0.0 4 0.0 0.0 0.0 2.174553451030019 0.0 5 0.0 0.0 0.0 4.1889508951725 0.0 6 0.0 0.0 0.0 5.0324668589091965 0.0 7 0.0 0.0 0.0 5.940294172561874 0.0 8 0.0 0.0 0.0 7.30452461465054 0.0 9 0.0 0.0 0.0 7.757193535672053 0.0 10 0.0 0.0 0.0 9.875318963549987 0.0 11 0.0 0.0 0.0 11.254071323361616 0.0 12 0.0 0.0 0.0 13.458498433707446 0.0 13 0.0 0.0 0.0 14.012820778789703 0.0 14 0.0 0.0 0.0 14.268821442648798 0.0 15 0.0 0.0 0.0 14.806547310333382 0.0 16 0.0 0.0 0.0 15.636371180217 0.0 17 0.0 0.0 0.0 16.581125656079497 0.0 18 0.0 0.0 0.0 17.713420326535694 0.0 19 0.0 0.0 0.0 18.496774059705828 0.0 20 0.0 0.0 0.0 19.104205132460635 0.0 21 0.0 0.0 0.0 19.755616870319276 0.0 22 0.0 0.0 0.0 20.430678588469597 0.0 23 0.0 0.0 0.0 21.091218388896955 0.0 24 0.0 0.0 0.0 21.58579341534759 0.0 25 0.0 0.0 0.0 22.044686015393232 0.0 26 0.0 0.0 0.0 22.469555836773644 0.0 27 4.149119349418086E-4 0.0 0.0 22.95002385743626 0.0 28 4.149119349418086E-4 0.0 0.0 23.387755948799867 0.0 29 4.149119349418086E-4 0.0 0.0 23.81718980146464 0.0 30 4.149119349418086E-4 0.0 0.0 24.3030516772815 0.0 31 4.149119349418086E-4 0.0 0.0 24.787253905358586 0.0 32 4.149119349418086E-4 0.0 0.0 25.239093002510216 0.0 33 4.149119349418086E-4 0.0 0.0 25.685123332572662 0.0 34 4.149119349418086E-4 0.0 0.0 26.11414227330249 0.0 35 4.149119349418086E-4 0.0 0.0 26.636516399394228 0.0 36 4.149119349418086E-4 0.0 0.0 27.09582391137481 0.0 37 4.149119349418086E-4 0.0 0.0 27.566748957533765 0.0 38 4.149119349418086E-4 0.0 0.0 27.992863514719 0.0 39 4.149119349418086E-4 0.0 0.0 28.434744725432026 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAGGG 35 1.2065902E-7 45.000004 3 CATCGAA 35 1.2065902E-7 45.000004 42 ATCGAAT 35 1.2065902E-7 45.000004 43 AGCCGAT 20 7.0221827E-4 45.0 28 CGAAATT 20 7.0221827E-4 45.0 13 CACGGGC 55 1.8189894E-12 45.0 4 TTTCGTC 20 7.0221827E-4 45.0 16 GATCAAC 20 7.0221827E-4 45.0 9 TAACGCC 20 7.0221827E-4 45.0 12 TATGCGG 25 3.881604E-5 45.0 2 TATGCAG 40 6.7757355E-9 45.0 1 GCTTGCG 20 7.0221827E-4 45.0 1 AACGGGC 55 1.8189894E-12 45.0 4 AATGCGG 20 7.0221827E-4 45.0 2 TACGCGG 20 7.0221827E-4 45.0 2 TCGTGGA 20 7.0221827E-4 45.0 1 TACTAGA 20 7.0221827E-4 45.0 30 ATAACGC 20 7.0221827E-4 45.0 11 TAGGCCC 20 7.0221827E-4 45.0 31 CGGTACA 20 7.0221827E-4 45.0 36 >>END_MODULE