##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936425.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 272330 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.971552895384278 33.0 31.0 34.0 30.0 34.0 2 32.073781808834866 33.0 31.0 34.0 30.0 34.0 3 32.03364667866192 33.0 31.0 34.0 30.0 34.0 4 35.684412293908125 37.0 35.0 37.0 33.0 37.0 5 32.11822054125509 37.0 35.0 37.0 0.0 37.0 6 33.87020526567033 37.0 35.0 37.0 17.0 37.0 7 35.504237505967026 37.0 35.0 37.0 32.0 37.0 8 35.73004810340396 37.0 35.0 37.0 35.0 37.0 9 37.63341901369662 39.0 37.0 39.0 35.0 39.0 10 37.30281276392612 39.0 37.0 39.0 34.0 39.0 11 37.23574707156758 39.0 37.0 39.0 34.0 39.0 12 37.167234605074725 39.0 37.0 39.0 34.0 39.0 13 37.07525061506261 39.0 37.0 39.0 33.0 39.0 14 38.27388829728638 40.0 38.0 41.0 33.0 41.0 15 38.41675540704293 40.0 38.0 41.0 34.0 41.0 16 38.40722652664047 40.0 37.0 41.0 34.0 41.0 17 38.36895678037675 40.0 37.0 41.0 34.0 41.0 18 38.325729813094405 40.0 37.0 41.0 34.0 41.0 19 38.194587449050786 40.0 37.0 41.0 34.0 41.0 20 38.25828223111666 40.0 37.0 41.0 34.0 41.0 21 38.2359600484706 40.0 37.0 41.0 34.0 41.0 22 38.318819079792895 40.0 37.0 41.0 34.0 41.0 23 38.33862225975838 40.0 37.0 41.0 34.0 41.0 24 38.319994124775086 40.0 37.0 41.0 34.0 41.0 25 38.078963022803215 40.0 37.0 41.0 34.0 41.0 26 38.115371057173284 40.0 37.0 41.0 34.0 41.0 27 38.05349025079866 40.0 37.0 41.0 34.0 41.0 28 37.9971248118092 40.0 37.0 41.0 34.0 41.0 29 37.99401461462197 40.0 36.0 41.0 34.0 41.0 30 37.8532221936621 40.0 36.0 41.0 34.0 41.0 31 37.857911357544154 40.0 36.0 41.0 34.0 41.0 32 37.784856607792015 40.0 36.0 41.0 33.0 41.0 33 37.722652664047295 40.0 36.0 41.0 33.0 41.0 34 37.63802004920501 40.0 36.0 41.0 33.0 41.0 35 37.63526970954357 40.0 36.0 41.0 33.0 41.0 36 37.526713913266995 40.0 36.0 41.0 33.0 41.0 37 37.365057099842105 40.0 36.0 41.0 33.0 41.0 38 37.31929276980134 40.0 35.0 41.0 33.0 41.0 39 37.27474387691404 40.0 35.0 41.0 32.0 41.0 40 37.17171079205376 39.0 35.0 41.0 32.0 41.0 41 37.138985789299745 39.0 35.0 41.0 32.0 41.0 42 37.1100980428157 39.0 35.0 41.0 32.0 41.0 43 37.00860353247898 39.0 35.0 41.0 32.0 41.0 44 36.93776668013072 39.0 35.0 41.0 32.0 41.0 45 36.976656997025664 39.0 35.0 41.0 32.0 41.0 46 36.909749201336616 39.0 35.0 41.0 32.0 41.0 47 36.81017515514266 39.0 35.0 41.0 31.0 41.0 48 36.82505049021408 39.0 35.0 41.0 31.0 41.0 49 36.797613189879925 39.0 35.0 41.0 31.0 41.0 50 36.65304960893034 39.0 35.0 41.0 31.0 41.0 51 35.68393493188411 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 6.0 10 8.0 11 9.0 12 6.0 13 10.0 14 5.0 15 7.0 16 13.0 17 22.0 18 46.0 19 90.0 20 214.0 21 354.0 22 561.0 23 758.0 24 1021.0 25 1247.0 26 1658.0 27 2049.0 28 2379.0 29 2914.0 30 3508.0 31 4819.0 32 6580.0 33 9579.0 34 16124.0 35 22465.0 36 19595.0 37 31267.0 38 54055.0 39 90882.0 40 73.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.927955054529434 20.341864649506114 23.824404215473873 11.90577608049058 2 31.838945397128484 26.04450482870047 24.163698454081445 17.952851320089596 3 31.193405060037456 26.465685014504466 25.970330114199687 16.370579811258402 4 28.383578746373882 25.312304924172878 27.176587228729847 19.127529100723386 5 23.803106525171668 36.06984173612896 21.842250211140897 18.28480152755848 6 24.18242573348511 36.01733191348731 24.183527338155912 15.616715014871662 7 78.89252010428524 5.183049976131899 11.018249917379649 4.906180002203209 8 78.75812433444717 6.7095068483090365 8.789703668343554 5.742665148900231 9 72.48925935445966 7.417838651635883 11.003929056659201 9.088972937245254 10 37.16593838357875 32.00235008996438 17.259941982154004 13.571769544302867 11 28.165093819997793 25.131641758161056 28.397165203980464 18.306099217860684 12 26.6019167921272 21.644328571953146 31.561341020085926 20.192413615833733 13 23.59270003304814 26.063599309661072 32.491829765358204 17.85187089193258 14 18.953108361179453 30.594866522234053 28.8899496933867 21.562075423199794 15 15.958579664377778 27.343663937135094 37.16997760070503 19.5277787977821 16 18.595454044725148 25.38170601843352 33.668710755333606 22.35412918150773 17 18.767671574927476 25.20875408511732 30.23390739176734 25.78966694818786 18 20.58972570043697 24.306539859729003 31.925604964565053 23.178129475268975 19 20.803804208129844 27.285646091139427 29.138545147431426 22.772004553299304 20 23.840561083978994 26.149157272426837 30.123746924686962 19.88653471890721 21 21.695369588367054 28.42323651452282 29.384937392134542 20.49645650497558 22 18.999742958910147 25.136415378401207 29.15286600815187 26.710975654536774 23 18.867183196856754 29.03866632394521 28.872691220210772 23.22145925898726 24 21.310909558256526 24.62049719090809 30.352513494657217 23.716079756178164 25 18.591782029155805 28.73352183013256 28.80806374619028 23.866632394521353 26 19.933903719751772 27.353211177615393 29.90195718429846 22.81092791833437 27 21.69500238681012 27.034480226196163 29.448830463041165 21.82168692395256 28 17.62273712040539 27.342562332464286 31.412991591084342 23.62170895604597 29 20.73513751698307 25.55539235486358 30.592663312892448 23.116806815260897 30 21.167700951052034 26.940843829177837 30.504534939228144 21.38692028054199 31 21.685822347886756 27.82212756582088 25.528586641207358 24.963463445085008 32 23.95108875261631 30.457533139940512 25.106672052289504 20.484706055153673 33 21.759997062387544 28.522380934895164 26.515991627804503 23.201630374912792 34 21.308339147357984 27.766680130723753 27.41526824073734 23.50971248118092 35 22.713252304189773 25.83116072412147 27.862519737083684 23.593067234605076 36 24.398340248962654 27.153086329086033 26.957000697682957 21.49157272426835 37 20.514449381265376 28.636947820658758 29.557522123893804 21.29108067418206 38 20.53868468402306 29.545771674071897 25.34682187052473 24.56872177138031 39 22.629163147651745 28.30499761318988 26.82003451694635 22.24580472221202 40 24.051701979216393 26.608893621708958 28.502552050820697 20.836852348253956 41 21.647633385965555 25.914882679102558 27.459699629126426 24.977784305805457 42 24.58230822898689 24.294422208350163 28.20915800682995 22.914111555832996 43 24.568354569823374 24.59736349282121 27.494950978592147 23.339330958763266 44 21.086182205412552 26.627253699555688 27.92604560643337 24.360518488598395 45 21.005765064443874 26.090772224874232 26.808651268681377 26.094811442000516 46 23.901149340873204 27.170344802261965 26.73851577130687 22.189990085557962 47 20.698784562846548 26.0140270994749 30.770756068005728 22.516432269672823 48 21.9792163918775 24.6238020049205 28.641354239341975 24.75562736386002 49 22.33907391767341 23.104689163882057 31.110050306613303 23.446186611831234 50 20.830977123343004 24.57716740718981 30.10465244372636 24.48720302574083 51 20.171850328645395 23.98927771453751 26.600815187456394 29.238056769360703 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 82.0 1 235.0 2 388.0 3 704.0 4 1020.0 5 705.0 6 390.0 7 397.0 8 404.0 9 408.5 10 413.0 11 385.0 12 357.0 13 396.5 14 436.0 15 385.5 16 335.0 17 399.0 18 463.0 19 483.5 20 504.0 21 580.5 22 657.0 23 885.0 24 1113.0 25 1485.0 26 2178.0 27 2499.0 28 2935.5 29 3372.0 30 3964.0 31 4556.0 32 5164.0 33 5772.0 34 6569.0 35 7366.0 36 8121.0 37 8876.0 38 9326.0 39 9776.0 40 11621.0 41 13466.0 42 15651.5 43 17837.0 44 19724.0 45 21611.0 46 27234.5 47 32858.0 48 32141.0 49 31424.0 50 30599.0 51 29774.0 52 24725.0 53 19676.0 54 16794.0 55 13912.0 56 12263.5 57 10615.0 58 9754.0 59 8893.0 60 8076.5 61 7260.0 62 6588.5 63 5917.0 64 4774.5 65 3632.0 66 2743.5 67 1855.0 68 1511.0 69 1167.0 70 933.5 71 700.0 72 584.0 73 468.0 74 407.5 75 264.5 76 182.0 77 129.5 78 77.0 79 47.0 80 17.0 81 10.5 82 4.0 83 3.0 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 272330.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.35842102362174 #Duplication Level Percentage of deduplicated Percentage of total 1 71.65182715667004 26.767991260306534 2 11.337011638100467 8.470657078517137 3 4.173183785546677 4.677106706082131 4 2.106196098625613 3.1473664244306074 5 1.368462849817679 2.5561805649337055 6 1.0365924617607196 2.323527456982169 7 0.8446678862283742 2.2088820963196563 8 0.6877295911035838 2.0553993291880728 9 0.687729591017973 2.3123242450487367 >10 5.986646105487129 37.985676660256665 >50 0.08096816405817904 2.0692165119051134 >100 0.03198742283779912 2.1595883573988934 >500 0.0029988208910436682 0.8536778462759589 >1k 0.00399842785472489 2.4124054623546347 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 1754 0.6440715308632908 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 1648 0.6051481658282231 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 1565 0.5746704366026512 No Hit GCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 1493 0.5482319245033599 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 999 0.3668343553776668 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGCT 749 0.27503396614401643 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 538 0.19755443763081557 No Hit TCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 416 0.1527558476847942 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCT 333 0.12227811845922226 No Hit ACTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 293 0.1075900561818382 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.672015569346014E-4 0.0 0.0 0.2889876253075313 0.0 2 3.672015569346014E-4 0.0 0.0 1.5169096316968385 0.0 3 3.672015569346014E-4 0.0 0.0 1.991701244813278 0.0 4 3.672015569346014E-4 0.0 0.0 2.6493592332831493 0.0 5 3.672015569346014E-4 0.0 0.0 4.762971394998715 0.0 6 3.672015569346014E-4 0.0 0.0 5.76726765321485 0.0 7 3.672015569346014E-4 0.0 0.0 6.842066610362428 0.0 8 3.672015569346014E-4 0.0 0.0 8.589578819814196 0.0 9 3.672015569346014E-4 0.0 0.0 9.20757904013513 0.0 10 3.672015569346014E-4 0.0 0.0 11.196709874049866 0.0 11 3.672015569346014E-4 0.0 0.0 13.06760180663166 0.0 12 3.672015569346014E-4 0.0 0.0 15.1830499761319 0.0 13 3.672015569346014E-4 0.0 0.0 15.832262328792273 0.0 14 3.672015569346014E-4 0.0 0.0 16.080490581280063 0.0 15 3.672015569346014E-4 0.0 0.0 16.621378474644732 0.0 16 3.672015569346014E-4 0.0 0.0 17.5581096463849 0.0 17 3.672015569346014E-4 0.0 0.0 18.739397055043515 0.0 18 3.672015569346014E-4 0.0 0.0 20.024969705871552 0.0 19 3.672015569346014E-4 0.0 0.0 20.83575074358315 0.0 20 3.672015569346014E-4 0.0 0.0 21.510667205228952 0.0 21 3.672015569346014E-4 0.0 0.0 22.329526677193112 0.0 22 3.672015569346014E-4 0.0 0.0 23.19134873131862 0.0 23 3.672015569346014E-4 0.0 0.0 24.071898064847794 0.0 24 3.672015569346014E-4 0.0 0.0 24.69724231630742 0.0 25 3.672015569346014E-4 0.0 0.0 25.287335218301326 0.0 26 3.672015569346014E-4 0.0 0.0 25.819410274299564 0.0 27 3.672015569346014E-4 0.0 0.0 26.35882936143649 0.0 28 3.672015569346014E-4 0.0 0.0 26.88062277384056 0.0 29 3.672015569346014E-4 0.0 0.0 27.438769140381154 0.0 30 3.672015569346014E-4 0.0 0.0 28.108544780229867 0.0 31 3.672015569346014E-4 0.0 0.0 28.682113612161714 0.0 32 3.672015569346014E-4 0.0 0.0 29.22593911798186 0.0 33 7.344031138692028E-4 0.0 0.0 29.75654536775236 0.0 34 7.344031138692028E-4 0.0 0.0 30.280541989498037 0.0 35 7.344031138692028E-4 0.0 0.0 30.8978078067051 0.0 36 7.344031138692028E-4 0.0 0.0 31.43722689384203 0.0 37 0.0011016046708038042 0.0 0.0 32.0078581133184 0.0 38 0.0011016046708038042 0.0 0.0 32.50761943230639 0.0 39 0.0011016046708038042 0.0 0.0 33.05732016303749 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 65 0.0 45.000004 4 GATCGTA 20 7.0237945E-4 45.000004 9 CAAAACG 30 2.1593805E-6 45.000004 9 GCGAACG 20 7.0237945E-4 45.000004 1 GTCCTCG 20 7.0237945E-4 45.000004 23 ATTACGG 20 7.0237945E-4 45.000004 2 CCTCGTT 20 7.0237945E-4 45.000004 25 TATGCGT 20 7.0237945E-4 45.000004 20 TCGATAT 20 7.0237945E-4 45.000004 16 ACGGGTA 20 7.0237945E-4 45.000004 5 ATCGTCT 20 7.0237945E-4 45.000004 40 GTTACGT 20 7.0237945E-4 45.000004 25 GCTTACG 35 1.2073724E-7 45.000004 1 TGTTACG 20 7.0237945E-4 45.000004 1 GAGCCCG 35 1.2073724E-7 45.000004 3 ACGTCCC 20 7.0237945E-4 45.000004 39 TTACGTG 20 7.0237945E-4 45.000004 26 AACCTCG 20 7.0237945E-4 45.000004 26 ACATCGT 20 7.0237945E-4 45.000004 38 CCACGAG 20 7.0237945E-4 45.000004 40 >>END_MODULE