##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936424.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 790380 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.969265416635036 33.0 31.0 34.0 30.0 34.0 2 32.119423568410134 33.0 31.0 34.0 30.0 34.0 3 31.963701004580077 33.0 31.0 34.0 30.0 34.0 4 35.68143045117539 37.0 35.0 37.0 33.0 37.0 5 32.393544877147704 37.0 35.0 37.0 19.0 37.0 6 33.99909031098965 37.0 35.0 37.0 19.0 37.0 7 35.50160555682077 37.0 35.0 37.0 32.0 37.0 8 35.696144892330274 37.0 35.0 37.0 33.0 37.0 9 37.62425921708545 39.0 37.0 39.0 35.0 39.0 10 37.31593157721602 39.0 37.0 39.0 34.0 39.0 11 37.29394721526354 39.0 37.0 39.0 34.0 39.0 12 37.265159796553554 39.0 37.0 39.0 34.0 39.0 13 37.22720210531643 39.0 37.0 39.0 34.0 39.0 14 38.42638730737114 40.0 38.0 41.0 34.0 41.0 15 38.5202004099294 40.0 38.0 41.0 34.0 41.0 16 38.487586983476305 40.0 38.0 41.0 34.0 41.0 17 38.43862572433513 40.0 38.0 41.0 34.0 41.0 18 38.25973582327488 40.0 38.0 41.0 34.0 41.0 19 38.01901743465169 40.0 37.0 41.0 34.0 41.0 20 37.92892532705787 40.0 36.0 41.0 34.0 41.0 21 37.883123307776 40.0 35.0 41.0 34.0 41.0 22 37.94546547230446 40.0 35.0 41.0 34.0 41.0 23 37.94529340317316 40.0 35.0 41.0 34.0 41.0 24 37.90901971203725 40.0 35.0 41.0 34.0 41.0 25 37.65647030542271 40.0 35.0 41.0 33.0 41.0 26 37.65470153597004 40.0 35.0 41.0 33.0 41.0 27 37.636445760267215 40.0 35.0 41.0 33.0 41.0 28 37.53502492471976 40.0 35.0 41.0 33.0 41.0 29 37.44962802702498 40.0 35.0 41.0 33.0 41.0 30 37.22222348743642 39.0 35.0 41.0 33.0 41.0 31 37.10648169235051 39.0 35.0 41.0 32.0 41.0 32 36.85184215187631 39.0 35.0 41.0 31.0 41.0 33 36.57786128191503 39.0 35.0 41.0 31.0 41.0 34 36.283621802171105 39.0 35.0 41.0 30.0 41.0 35 36.133914066651485 39.0 35.0 41.0 29.0 41.0 36 35.95924112452238 39.0 35.0 41.0 27.0 41.0 37 35.83710873250841 39.0 35.0 41.0 27.0 41.0 38 35.66959943318404 39.0 35.0 41.0 26.0 41.0 39 35.566028998709484 39.0 35.0 41.0 25.0 41.0 40 35.43395328829171 39.0 35.0 41.0 24.0 41.0 41 35.31668311445128 39.0 35.0 41.0 24.0 41.0 42 35.26004833118247 39.0 35.0 41.0 23.0 41.0 43 35.204545914623345 39.0 35.0 41.0 23.0 41.0 44 35.14903970242162 38.0 35.0 41.0 23.0 41.0 45 35.13450618689744 38.0 35.0 41.0 23.0 41.0 46 35.020798856246365 38.0 35.0 40.0 23.0 41.0 47 34.90592373288798 38.0 34.0 40.0 23.0 41.0 48 34.86815582378097 38.0 34.0 40.0 23.0 41.0 49 34.85283028416711 38.0 34.0 40.0 23.0 41.0 50 34.74425845795693 38.0 34.0 40.0 23.0 41.0 51 33.75409423315367 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 19.0 9 48.0 10 37.0 11 30.0 12 26.0 13 16.0 14 24.0 15 49.0 16 70.0 17 142.0 18 315.0 19 582.0 20 1049.0 21 1881.0 22 2714.0 23 4089.0 24 6318.0 25 9936.0 26 13350.0 27 14355.0 28 13977.0 29 13345.0 30 13805.0 31 16173.0 32 20429.0 33 28469.0 34 46533.0 35 57354.0 36 61987.0 37 89758.0 38 144733.0 39 228598.0 40 163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.539689769477974 16.616437662896328 19.158632556491813 20.685240011133885 2 39.185202054707865 24.10751790278094 20.58655330347428 16.120726739036918 3 29.058680634631447 24.65307826615046 31.215238239834004 15.073002859384093 4 24.921936283812848 22.455527720843136 35.02834079809712 17.594195197246894 5 22.30319593107113 32.856980186745616 27.827500695867812 17.01232318631544 6 22.197677066727397 32.344315392595966 30.87767909107012 14.580328449606519 7 71.49953187074571 4.647890887927326 19.125736987271946 4.726840254055011 8 71.83291581264709 5.916647688453655 16.96968546774969 5.280751031149573 9 66.38047521445381 5.497735266580632 18.695690680432197 9.426098838533365 10 34.94762013208836 24.034894607657076 25.239505048204663 15.777980212049899 11 26.565069966345302 22.596978668488575 31.7652268529062 19.072724512259924 12 22.662769806928313 20.221918570814037 36.209924340190796 20.905387282066854 13 22.512841924137756 21.167792707305345 38.670133353576766 17.649232014980136 14 19.287178319289456 25.321617449834257 36.042409980009616 19.34879425086667 15 18.145449024519852 23.40557706419697 38.93772615703839 19.511247754244792 16 21.12743237430097 23.479212530681444 34.712163769326146 20.68119132569144 17 20.595789367139858 24.07955666894405 33.482755130443586 21.841898833472506 18 22.26612515498874 22.63177205900959 33.50881854297933 21.593284243022342 19 20.455224069434955 25.738632050406135 31.865178774766566 21.940965105392344 20 21.98018674561603 25.281004073989727 32.60444343227309 20.13436574812116 21 21.505857941749536 26.640603254130923 33.34497330398036 18.508565500139174 22 20.46926794706344 21.811660214074244 34.180014676484724 23.539057162377592 23 19.598800576937673 25.926263316379462 33.82322427186923 20.651711834813636 24 21.125914117260052 23.965181305194967 33.131278625471296 21.777625952073688 25 21.689946607960728 26.334547938966068 30.938029808446572 21.037475644626635 26 20.10918798552595 24.223411523570938 32.3602570915256 23.307143399377512 27 22.14871327715782 23.410637921000024 31.823173663301198 22.617475138540954 28 19.135985222298135 25.37096080366406 33.14064121055695 22.35241276348086 29 20.323388749715328 25.887041676155775 31.515473569675343 22.274096004453554 30 20.576431589868164 26.025582631139454 33.13633948227435 20.261646296718034 31 21.490042764239988 24.231002808775525 31.823173663301198 22.455780763683293 32 21.776487259293 24.546167666185887 31.068599913965432 22.60874516055568 33 20.976618841569877 23.723272350008855 30.937650244186344 24.362458564234927 34 20.134492269541234 24.459880057693766 32.25587691996255 23.14975075280245 35 22.143019813254384 25.04618031832789 29.690655127913157 23.120144740504568 36 23.88420759634606 26.125028467319517 29.291859611832283 20.698904324502138 37 22.0973455806068 25.062375060097676 29.75277714517068 23.087502214124854 38 21.91983602823958 24.629292239176092 30.845289607530557 22.605582125053772 39 23.440117411877832 22.871783192894558 28.834231635415875 24.853867759811738 40 24.45709658645209 22.38518181128065 31.860624003643817 21.297097598623445 41 21.944001619474175 24.569068043219715 29.677623421645283 23.809306915660823 42 23.040436245856423 24.83008173283737 30.37096080366406 21.758521217642148 43 23.45567954654723 23.49237075836939 29.951162731850502 23.100786963232874 44 22.947443002100258 23.273741744477338 30.115640577949847 23.663174675472558 45 21.876312659733294 22.274728611553936 29.78213011462841 26.066828614084365 46 23.857132012449707 23.24691920342114 29.407753232622287 23.48819555150687 47 20.896530782661504 24.010855537842556 32.744882208557904 22.34773147093803 48 21.236746881246997 24.324502138211997 30.70624256686657 23.732508413674434 49 21.63895847566993 22.99261114906754 32.09759862344695 23.27083175181558 50 20.407905058326374 22.749563501100738 33.321566841266225 23.520964599306662 51 20.612490194589945 21.681090108555377 31.372377843568916 26.33404185328576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 303.0 1 747.0 2 1191.0 3 12520.0 4 23849.0 5 15104.0 6 6359.0 7 6083.5 8 5808.0 9 5797.0 10 5786.0 11 5745.0 12 5704.0 13 5490.0 14 5276.0 15 5158.0 16 5040.0 17 4863.5 18 4687.0 19 4302.5 20 3918.0 21 3848.0 22 3778.0 23 3776.5 24 3775.0 25 4180.0 26 5319.5 27 6054.0 28 7153.5 29 8253.0 30 9024.0 31 9795.0 32 11098.0 33 12401.0 34 14392.5 35 16384.0 36 17664.5 37 18945.0 38 20949.0 39 22953.0 40 25389.0 41 27825.0 42 30615.0 43 33405.0 44 39367.0 45 45329.0 46 64953.5 47 84578.0 48 79804.5 49 75031.0 50 74784.0 51 74537.0 52 65549.5 53 56562.0 54 50782.5 55 45003.0 56 41540.5 57 38078.0 58 35580.0 59 33082.0 60 30151.5 61 27221.0 62 24483.5 63 21746.0 64 19560.5 65 17375.0 66 14705.0 67 12035.0 68 9986.0 69 7937.0 70 6793.5 71 5650.0 72 4996.0 73 4342.0 74 3513.0 75 2146.5 76 1609.0 77 1193.5 78 778.0 79 598.0 80 418.0 81 310.5 82 203.0 83 131.0 84 59.0 85 38.5 86 18.0 87 19.5 88 21.0 89 13.0 90 5.0 91 4.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 790380.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.54414804579568 #Duplication Level Percentage of deduplicated Percentage of total 1 73.41209313738045 29.030186793763136 2 9.236502198957313 7.304992207617706 3 4.030408789530577 4.7813724557481985 4 2.4706024562897326 3.9079147717531058 5 1.7321370283915898 3.424794154316081 6 1.467726967135565 3.4824007487529283 7 1.140657283951934 3.1574424354277335 8 0.9917377170060175 3.13739384831083 9 0.8565442429488759 3.0484181115849895 >10 4.579353990163682 27.59739145854506 >50 0.04482680094782032 1.214447883107546 >100 0.029669514062798 2.206103217671902 >500 0.00322494718073547 0.9363090250382909 >1k 0.0038699366168825637 3.800200577106515 >5k 3.22494718073547E-4 1.092147982896748 >10k+ 3.22494718073547E-4 1.8784843283593062 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14730 1.863660517725651 No Hit GAATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 8564 1.0835294415344519 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCG 3962 0.5012778663427718 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGC 3667 0.4639540474202283 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTT 3274 0.41423112933019557 No Hit GAACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 2891 0.36577342544092717 No Hit GCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 2888 0.3653938611806979 No Hit CGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 2825 0.3574230117158835 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 2695 0.340975227105949 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCT 1907 0.24127634808573092 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1719 0.21749032111136415 No Hit CGTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 1378 0.17434651686530528 No Hit CCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 1357 0.1716895670437005 No Hit GAATGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTT 1236 0.1563804752144538 No Hit CTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGCT 979 0.12386447025481413 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTC 894 0.11311014954831854 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCC 822 0.10400060730281636 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCT 798 0.1009640932209823 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTC 793 0.10033148612060021 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2652142007641893E-4 0.0 0.0 0.12879880563779447 0.0 2 1.2652142007641893E-4 0.0 0.0 0.7416685644879678 0.0 3 1.2652142007641893E-4 0.0 0.0 1.3064601837091019 0.0 4 1.2652142007641893E-4 0.0 0.0 2.118601179179635 0.0 5 1.2652142007641893E-4 0.0 0.0 4.291733090412206 0.0 6 1.2652142007641893E-4 0.0 0.0 6.072901642248032 0.0 7 1.2652142007641893E-4 0.0 0.0 7.245755206356436 0.0 8 1.2652142007641893E-4 0.0 0.0 8.779068296262558 0.0 9 1.2652142007641893E-4 0.0 0.0 9.60892229054379 0.0 10 2.5304284015283785E-4 0.0 0.0 11.231812545864015 0.0 11 2.5304284015283785E-4 0.0 0.0 12.267263847769428 0.0 12 2.5304284015283785E-4 0.0 0.0 13.625218249449631 0.0 13 2.5304284015283785E-4 0.0 0.0 14.155089956729674 0.0 14 2.5304284015283785E-4 0.0 0.0 14.470507856980186 0.0 15 2.5304284015283785E-4 0.0 0.0 14.803385713201244 0.0 16 2.5304284015283785E-4 0.0 0.0 15.216731192590906 0.0 17 2.5304284015283785E-4 0.0 0.0 15.68612566107442 0.0 18 2.5304284015283785E-4 0.0 0.0 16.238012095447758 0.0 19 2.5304284015283785E-4 0.0 0.0 16.643639768212758 0.0 20 2.5304284015283785E-4 0.0 0.0 17.000683215668413 0.0 21 2.5304284015283785E-4 0.0 0.0 17.37392140489385 0.0 22 2.5304284015283785E-4 0.0 0.0 17.80915508995673 0.0 23 2.5304284015283785E-4 0.0 0.0 18.21857840532402 0.0 24 2.5304284015283785E-4 0.0 0.0 18.57258533869784 0.0 25 2.5304284015283785E-4 0.0 0.0 18.88876236746881 0.0 26 2.5304284015283785E-4 0.0 0.0 19.19620941825451 0.0 27 2.5304284015283785E-4 0.0 0.0 19.556036336951845 0.0 28 2.5304284015283785E-4 0.0 0.0 19.89688504263772 0.0 29 2.5304284015283785E-4 0.0 0.0 20.241529390925884 0.0 30 2.5304284015283785E-4 0.0 0.0 20.718009058933678 0.0 31 2.5304284015283785E-4 0.0 0.0 21.073154685088184 0.0 32 3.795642602292568E-4 0.0 0.0 21.463852830284168 0.0 33 3.795642602292568E-4 0.0 0.0 21.84278448341304 0.0 34 5.060856803056757E-4 0.0 0.0 22.20286444495053 0.0 35 6.326071003820947E-4 0.0 0.0 22.605708646473847 0.0 36 6.326071003820947E-4 0.0 0.0 22.95996862268782 0.0 37 7.591285204585136E-4 0.0 0.0 23.331182469192033 0.0 38 8.856499405349326E-4 0.0 0.0 23.72808016397176 0.0 39 0.0010121713606113514 0.0 0.0 24.26238012095448 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 30 2.1646374E-6 45.000004 9 CAATGCG 20 7.031947E-4 45.000004 1 CGTTATT 855 0.0 43.94737 1 CGTTTTT 6785 0.0 43.77303 1 TCACGAC 75 0.0 39.0 25 CGACGGT 75 0.0 39.0 28 CGGTCTA 75 0.0 39.0 31 GGCGATA 145 0.0 38.793106 8 TACGGGA 320 0.0 38.67188 4 TAGACGG 70 0.0 38.57143 2 CGTTTCT 405 0.0 38.333336 1 TATCACG 30 1.1395991E-4 37.500004 1 TCGTTAA 30 1.1395991E-4 37.500004 35 CCGATAT 30 1.1395991E-4 37.500004 9 TTCGAAT 30 1.1395991E-4 37.500004 17 GTTATTT 1020 0.0 37.5 2 CGTTCTG 375 0.0 37.199997 1 GTTTTTT 8100 0.0 37.13889 2 CTCACGA 85 0.0 37.058823 24 CGTATGG 85 0.0 37.058823 2 >>END_MODULE