SRR2936422.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936422.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	527739
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	3164	0.5995387871656255	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	2642	0.500626256539691	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC	2551	0.48338288434244964	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	1990	0.37708033706055455	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1423	0.26964086413928096	No Hit
CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	1348	0.255429293647049	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1307	0.2476603017779622	No Hit
CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT	896	0.16978089548053107	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	733	0.13889441561074697	No Hit
GAACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT	655	0.12411438229882575	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT	571	0.10819742334752597	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCACGG	35	1.2102646E-7	45.000004	2
ATAACGC	25	3.887927E-5	45.000004	11
TCACGAC	45	3.8380676E-10	45.0	25
GGTAATC	20	7.029815E-4	45.0	8
CTATACG	20	7.029815E-4	45.0	1
GAGCGAA	20	7.029815E-4	45.0	8
TGCCTTA	20	7.029815E-4	45.0	35
TATAGGC	20	7.029815E-4	45.0	2
TTCGACG	20	7.029815E-4	45.0	25
TAATACG	120	0.0	44.999996	4
TATAGCG	30	2.1632623E-6	44.999996	1
CGAATAT	70	0.0	41.785717	14
AATACGG	130	0.0	41.538464	5
CTCACGA	50	1.0786607E-9	40.500004	24
TTAACGG	50	1.0786607E-9	40.500004	2
TGCGATG	45	1.9248546E-8	40.0	1
TATACGG	45	1.9248546E-8	40.0	2
AATGCGG	85	0.0	39.705883	2
ATAATAC	165	0.0	39.545452	3
GCGATAC	40	3.4534787E-7	39.375	9