##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936422.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 527739 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.967205379932125 33.0 31.0 34.0 30.0 34.0 2 32.06824775125583 33.0 31.0 34.0 30.0 34.0 3 32.04248122651538 33.0 31.0 34.0 30.0 34.0 4 35.68703468949613 37.0 35.0 37.0 33.0 37.0 5 32.18384466563965 37.0 35.0 37.0 0.0 37.0 6 33.88128222473609 37.0 35.0 37.0 18.0 37.0 7 35.45981441583813 37.0 35.0 37.0 32.0 37.0 8 35.67353748728065 37.0 35.0 37.0 33.0 37.0 9 37.582983254980206 39.0 37.0 39.0 35.0 39.0 10 37.26942674314387 39.0 37.0 39.0 34.0 39.0 11 37.20609240552621 39.0 37.0 39.0 34.0 39.0 12 37.00534355050508 39.0 35.0 39.0 33.0 39.0 13 36.855638866939906 39.0 35.0 39.0 33.0 39.0 14 37.78954180001857 40.0 37.0 41.0 33.0 41.0 15 38.00425589164341 40.0 37.0 41.0 33.0 41.0 16 38.0734264475432 40.0 37.0 41.0 33.0 41.0 17 38.09350834408676 40.0 37.0 41.0 33.0 41.0 18 38.05336728951243 40.0 36.0 41.0 33.0 41.0 19 37.934708255406555 40.0 36.0 41.0 33.0 41.0 20 37.950723747913266 40.0 36.0 41.0 33.0 41.0 21 37.91448992778627 40.0 36.0 41.0 33.0 41.0 22 38.0089589740383 40.0 36.0 41.0 34.0 41.0 23 38.036965242288325 40.0 36.0 41.0 34.0 41.0 24 37.9883446173203 40.0 36.0 41.0 34.0 41.0 25 37.732993013591944 40.0 35.0 41.0 33.0 41.0 26 37.74297711558175 40.0 35.0 41.0 33.0 41.0 27 37.68410521109867 40.0 35.0 41.0 33.0 41.0 28 37.62347107187455 40.0 35.0 41.0 33.0 41.0 29 37.56898770035946 40.0 35.0 41.0 33.0 41.0 30 37.358224425331464 39.0 35.0 41.0 33.0 41.0 31 37.33650725074327 39.0 35.0 41.0 33.0 41.0 32 37.27372242718465 39.0 35.0 41.0 33.0 41.0 33 37.180996666913 39.0 35.0 41.0 32.0 41.0 34 37.11016430470365 39.0 35.0 41.0 32.0 41.0 35 37.04274840404064 39.0 35.0 41.0 32.0 41.0 36 36.934048838535716 39.0 35.0 41.0 32.0 41.0 37 36.829987929639465 39.0 35.0 41.0 31.0 41.0 38 36.70044851716474 39.0 35.0 41.0 31.0 41.0 39 36.632178027396115 39.0 35.0 41.0 31.0 41.0 40 36.54310937793114 39.0 35.0 41.0 31.0 41.0 41 36.41408158199413 39.0 35.0 41.0 31.0 41.0 42 36.42316561785277 39.0 35.0 41.0 31.0 41.0 43 36.35458247353332 38.0 35.0 41.0 31.0 41.0 44 36.307919255541094 38.0 35.0 40.0 31.0 41.0 45 36.28311532784198 38.0 35.0 40.0 31.0 41.0 46 36.18077307153725 38.0 35.0 40.0 31.0 41.0 47 36.045986747236796 38.0 35.0 40.0 30.0 41.0 48 36.003325507495184 38.0 35.0 40.0 31.0 41.0 49 35.9871318966383 38.0 35.0 40.0 31.0 41.0 50 35.86553769950677 37.0 35.0 40.0 30.0 41.0 51 34.781901659721946 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 20.0 9 40.0 10 29.0 11 25.0 12 18.0 13 14.0 14 18.0 15 26.0 16 35.0 17 87.0 18 148.0 19 291.0 20 529.0 21 876.0 22 1282.0 23 1842.0 24 2466.0 25 3190.0 26 3943.0 27 4603.0 28 5386.0 29 6533.0 30 8405.0 31 11066.0 32 14926.0 33 22530.0 34 39871.0 35 44026.0 36 43394.0 37 65833.0 38 100896.0 39 145275.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.31228694487237 19.78913819141659 22.062610494960577 11.835964368750462 2 32.611575039934515 25.462965594735277 24.61387162972606 17.311587735604153 3 32.911912896337014 26.356399659680257 24.500747528607892 16.230939915374833 4 29.885795819524425 23.924326229442965 27.365800139841856 18.824077811190758 5 24.178239622237506 35.53991651176055 21.735933861245805 18.545910004756138 6 25.220800433547648 35.088557032927255 24.705204656089467 14.985437877435626 7 78.10262269796245 5.875442216701816 11.188485217124374 4.833449868211369 8 78.3944336120696 6.857366993911763 9.251163927623313 5.49703546639532 9 73.03269229676033 6.419461135144456 11.35542379850646 9.192422769588756 10 44.81381895217144 21.460418881303067 18.17034556854809 15.555416597977409 11 33.99843483236979 21.776863184263433 23.78069462366814 20.444007359698638 12 29.312974784884194 18.40701558914539 30.75156469391119 21.52844493205922 13 27.41620384318764 20.11808867641012 33.610932676948266 18.85477480345398 14 21.738965662950815 24.782136624354084 32.866246383155314 20.61265132953979 15 19.742145264988945 22.10088699148632 37.428539486374895 20.72842825714984 16 24.871574774651865 21.070074411783096 30.272540024519696 23.785810789045343 17 24.788958178190356 21.387845127989404 27.671443649228124 26.15175304459212 18 25.227053524564226 21.90969399646416 30.07111469874313 22.792137780228483 19 24.587343364807225 23.98590970157597 27.188060764885673 24.23868616873113 20 24.474029776082496 25.639189068838952 27.724121203852665 22.16265995122589 21 24.75977708677964 25.1861242015466 29.733826759060822 20.320271952612938 22 22.23542319214612 21.631905165242667 30.178743659270967 25.953927983340247 23 22.474935526841865 24.27412035115843 29.395591381345703 23.855352740654 24 23.45894466772401 24.83538264179831 27.1602060867209 24.545466603756783 25 24.09732841423507 25.239749194203952 25.771072443006865 24.891849948554114 26 22.048967387288034 22.91928396423232 27.858846892119022 27.172901756360623 27 23.902535154688206 22.525149742581085 29.678875353157526 23.89343974957318 28 21.897756277250686 23.436774617756125 29.121213327042344 25.54425577795084 29 25.633314953035498 23.329903607654543 27.7275319807708 23.309249458539163 30 25.87983832917408 22.89919827793663 28.945747803364917 22.275215589524365 31 28.173775294226882 22.051241238566792 25.522464703196086 24.25251876401024 32 29.652726063451816 24.25687697896119 24.350483856603358 21.739913100983628 33 26.82329712225172 23.60371319913821 25.401003147389144 24.171986531220927 34 25.280110054401895 22.71634273760325 27.06640972147217 24.937137486522694 35 24.852626013995554 25.490251810080363 26.267340484595604 23.38978169132848 36 28.511631696728873 25.558467348443077 24.47611413975469 21.45378681507336 37 24.296858863946003 25.6101974650348 27.292657923708504 22.800285747310696 38 25.03377616586987 26.90003960290977 24.534097347362994 23.53208688385736 39 24.428363262900792 24.68341358133471 24.661054043760267 26.22716911200423 40 24.727185218450785 24.016417206232628 27.52231690286297 23.734080672453615 41 21.66639190963715 24.718468788548886 25.88969168471536 27.725447617098602 42 22.67351853851999 24.513253710641056 28.54138125095928 24.271846499879675 43 23.98837304046129 23.432605890411736 28.048523986288675 24.530497082838295 44 24.705962606515723 21.924474029776082 28.12640339258611 25.243159971122086 45 24.06928424846373 21.92314761653014 26.16653307790404 27.841035057102093 46 25.64013650687177 23.476567015134375 27.311606684364808 23.571689793629048 47 21.925800443022027 23.962413238362146 30.014647391987324 24.097138926628503 48 22.506579957137905 25.740943913563335 27.057693291570267 24.6947828377285 49 24.13844722485926 22.58862809077972 29.34329280193429 23.92963188242673 50 22.72865943202985 22.691330373536918 28.630629913650495 25.949380280782737 51 22.145795554241776 23.065947371712152 26.578479134572202 28.209777939473867 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 172.0 1 501.0 2 830.0 3 1671.0 4 2512.0 5 1646.5 6 781.0 7 748.0 8 715.0 9 745.5 10 776.0 11 790.5 12 805.0 13 810.0 14 815.0 15 799.5 16 784.0 17 893.5 18 1003.0 19 980.0 20 957.0 21 1005.5 22 1054.0 23 1261.5 24 1469.0 25 1699.5 26 2338.5 27 2747.0 28 3253.0 29 3759.0 30 4450.5 31 5142.0 32 6132.0 33 7122.0 34 8216.5 35 9311.0 36 10173.5 37 11036.0 38 11910.0 39 12784.0 40 14689.0 41 16594.0 42 19130.5 43 21667.0 44 25366.0 45 29065.0 46 39690.5 47 50316.0 48 51216.5 49 52117.0 50 52119.5 51 52122.0 52 46680.0 53 41238.0 54 38863.0 55 36488.0 56 34968.0 57 33448.0 58 32281.5 59 31115.0 60 27963.5 61 24812.0 62 22568.5 63 20325.0 64 18222.5 65 16120.0 66 14298.0 67 12476.0 68 10403.5 69 8331.0 70 7263.5 71 6196.0 72 5107.0 73 4018.0 74 3305.0 75 1870.5 76 1149.0 77 843.0 78 537.0 79 417.0 80 297.0 81 218.5 82 140.0 83 85.5 84 31.0 85 22.0 86 13.0 87 15.5 88 18.0 89 11.0 90 4.0 91 3.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 527739.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.06982685665703 #Duplication Level Percentage of deduplicated Percentage of total 1 72.23128724553447 25.331387373343528 2 10.564123770684262 7.4096398306038385 3 4.07892202706707 4.291412677531399 4 2.1664085770823496 3.039022947962189 5 1.3526510774133174 2.3718619541177812 6 0.9636491358163511 2.027700500618797 7 0.8085393682195053 1.984873495517424 8 0.6484851303853407 1.8193808993384446 9 0.5224540727983875 1.6490136486235263 >10 6.544315399326152 42.18208329503997 >50 0.07193783241073676 1.707062496740891 >100 0.04118578191454292 2.858713413991573 >500 0.002196575035442289 0.5498266502927742 >1k 0.0038440063120240057 2.778020816277852 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC 3164 0.5995387871656255 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 2642 0.500626256539691 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC 2551 0.48338288434244964 No Hit GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1990 0.37708033706055455 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1423 0.26964086413928096 No Hit CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1348 0.255429293647049 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1307 0.2476603017779622 No Hit CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 896 0.16978089548053107 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 733 0.13889441561074697 No Hit GAACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT 655 0.12411438229882575 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT 571 0.10819742334752597 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7897521312618546E-4 0.0 0.0 0.17698142452992863 0.0 2 3.7897521312618546E-4 0.0 0.0 0.9796509259311895 0.0 3 3.7897521312618546E-4 0.0 0.0 1.3059485844328351 0.0 4 3.7897521312618546E-4 0.0 0.0 1.8135858824153606 0.0 5 3.7897521312618546E-4 0.0 0.0 3.5337543747951163 0.0 6 3.7897521312618546E-4 0.0 0.0 4.488203449053414 0.0 7 3.7897521312618546E-4 0.0 0.0 5.425409151114471 0.0 8 3.7897521312618546E-4 0.0 0.0 6.847513638370482 0.0 9 3.7897521312618546E-4 0.0 0.0 7.425450838387915 0.0 10 3.7897521312618546E-4 0.0 0.0 9.057507593715833 0.0 11 3.7897521312618546E-4 0.0 0.0 10.506519321103804 0.0 12 3.7897521312618546E-4 0.0 0.0 12.164535878530865 0.0 13 3.7897521312618546E-4 0.0 0.0 12.683542432907176 0.0 14 3.7897521312618546E-4 0.0 0.0 12.951288420980825 0.0 15 3.7897521312618546E-4 0.0 0.0 13.381614775485609 0.0 16 3.7897521312618546E-4 0.0 0.0 14.104320506917245 0.0 17 3.7897521312618546E-4 0.0 0.0 14.884440983137498 0.0 18 3.7897521312618546E-4 0.0 0.0 15.821836172805117 0.0 19 3.7897521312618546E-4 0.0 0.0 16.437481406528605 0.0 20 3.7897521312618546E-4 0.0 0.0 16.99646984588973 0.0 21 3.7897521312618546E-4 0.0 0.0 17.61040969115415 0.0 22 3.7897521312618546E-4 0.0 0.0 18.276269140616858 0.0 23 3.7897521312618546E-4 0.0 0.0 18.893240787586286 0.0 24 3.7897521312618546E-4 0.0 0.0 19.40012013514256 0.0 25 3.7897521312618546E-4 0.0 0.0 19.850532175943034 0.0 26 3.7897521312618546E-4 0.0 0.0 20.32463016756389 0.0 27 3.7897521312618546E-4 0.0 0.0 20.869596524039345 0.0 28 3.7897521312618546E-4 0.0 0.0 21.33232525926642 0.0 29 3.7897521312618546E-4 0.0 0.0 21.855500540987116 0.0 30 3.7897521312618546E-4 0.0 0.0 22.541635164352076 0.0 31 3.7897521312618546E-4 0.0 0.0 23.05363067728555 0.0 32 3.7897521312618546E-4 0.0 0.0 23.561078487661515 0.0 33 3.7897521312618546E-4 0.0 0.0 24.056588578824 0.0 34 3.7897521312618546E-4 0.0 0.0 24.607429051102912 0.0 35 7.579504262523709E-4 0.0 0.0 25.221558383973896 0.0 36 7.579504262523709E-4 0.0 0.0 25.709299483267298 0.0 37 7.579504262523709E-4 0.0 0.0 26.255592252988695 0.0 38 7.579504262523709E-4 0.0 0.0 26.834855866252067 0.0 39 7.579504262523709E-4 0.0 0.0 27.758039485427457 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCACGG 35 1.2102646E-7 45.000004 2 ATAACGC 25 3.887927E-5 45.000004 11 TCACGAC 45 3.8380676E-10 45.0 25 GGTAATC 20 7.029815E-4 45.0 8 CTATACG 20 7.029815E-4 45.0 1 GAGCGAA 20 7.029815E-4 45.0 8 TGCCTTA 20 7.029815E-4 45.0 35 TATAGGC 20 7.029815E-4 45.0 2 TTCGACG 20 7.029815E-4 45.0 25 TAATACG 120 0.0 44.999996 4 TATAGCG 30 2.1632623E-6 44.999996 1 CGAATAT 70 0.0 41.785717 14 AATACGG 130 0.0 41.538464 5 CTCACGA 50 1.0786607E-9 40.500004 24 TTAACGG 50 1.0786607E-9 40.500004 2 TGCGATG 45 1.9248546E-8 40.0 1 TATACGG 45 1.9248546E-8 40.0 2 AATGCGG 85 0.0 39.705883 2 ATAATAC 165 0.0 39.545452 3 GCGATAC 40 3.4534787E-7 39.375 9 >>END_MODULE