##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936420.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 702877 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12224471706998 33.0 31.0 34.0 30.0 34.0 2 32.25394770351 34.0 31.0 34.0 30.0 34.0 3 32.156136848979266 33.0 31.0 34.0 30.0 34.0 4 35.80536139324519 37.0 35.0 37.0 35.0 37.0 5 32.25119330978251 37.0 35.0 37.0 0.0 37.0 6 33.97489034354517 37.0 35.0 37.0 17.0 37.0 7 35.591530239287955 37.0 35.0 37.0 32.0 37.0 8 35.84078722166183 37.0 35.0 37.0 35.0 37.0 9 37.78740092505517 39.0 38.0 39.0 35.0 39.0 10 37.40981565764707 39.0 37.0 39.0 34.0 39.0 11 37.388008143672366 39.0 37.0 39.0 35.0 39.0 12 37.330770533108925 39.0 37.0 39.0 35.0 39.0 13 37.30769394929696 39.0 37.0 39.0 34.0 39.0 14 38.516087452000846 40.0 38.0 41.0 34.0 41.0 15 38.65538920750003 40.0 38.0 41.0 35.0 41.0 16 38.58806875171616 40.0 38.0 41.0 34.0 41.0 17 38.58084273635359 40.0 38.0 41.0 34.0 41.0 18 38.441333263145616 40.0 38.0 41.0 34.0 41.0 19 38.25063417923762 40.0 37.0 41.0 34.0 41.0 20 38.30636512505033 40.0 37.0 41.0 34.0 41.0 21 38.189596472782576 40.0 37.0 41.0 34.0 41.0 22 38.26493397849126 40.0 37.0 41.0 34.0 41.0 23 38.26647478861878 40.0 37.0 41.0 34.0 41.0 24 38.22896182404603 40.0 36.0 41.0 34.0 41.0 25 37.941868918743964 40.0 36.0 41.0 34.0 41.0 26 37.99404163175065 40.0 36.0 41.0 34.0 41.0 27 37.98381366867887 40.0 36.0 41.0 34.0 41.0 28 37.911113893327 40.0 36.0 41.0 34.0 41.0 29 37.852750908053615 40.0 36.0 41.0 34.0 41.0 30 37.6758892380886 40.0 35.0 41.0 33.0 41.0 31 37.60590971108743 40.0 35.0 41.0 33.0 41.0 32 37.488685787129185 40.0 35.0 41.0 33.0 41.0 33 37.358914859925704 40.0 35.0 41.0 33.0 41.0 34 37.17475034750034 40.0 35.0 41.0 32.0 41.0 35 37.08465919357156 40.0 35.0 41.0 32.0 41.0 36 36.96718913835564 40.0 35.0 41.0 32.0 41.0 37 36.9009499528367 40.0 35.0 41.0 32.0 41.0 38 36.74166319284882 39.0 35.0 41.0 31.0 41.0 39 36.65366059780018 39.0 35.0 41.0 31.0 41.0 40 36.57319844012537 39.0 35.0 41.0 31.0 41.0 41 36.44124932242768 39.0 35.0 41.0 31.0 41.0 42 36.39159909913114 39.0 35.0 41.0 31.0 41.0 43 36.30893314192953 39.0 35.0 41.0 31.0 41.0 44 36.215111605586756 39.0 35.0 41.0 30.0 41.0 45 36.155923440374345 39.0 35.0 41.0 30.0 41.0 46 36.03282651160872 38.0 35.0 41.0 30.0 41.0 47 35.946738903108226 38.0 35.0 41.0 30.0 41.0 48 35.88515913879669 38.0 35.0 41.0 30.0 41.0 49 35.82956335176709 38.0 35.0 40.0 30.0 41.0 50 35.72427039154788 38.0 35.0 40.0 29.0 41.0 51 34.727535543203146 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 21.0 9 32.0 10 38.0 11 32.0 12 20.0 13 11.0 14 30.0 15 38.0 16 69.0 17 112.0 18 172.0 19 324.0 20 562.0 21 930.0 22 1366.0 23 2109.0 24 3320.0 25 5152.0 26 6972.0 27 8291.0 28 8668.0 29 8680.0 30 10172.0 31 12381.0 32 16267.0 33 24095.0 34 41803.0 35 53834.0 36 56794.0 37 85468.0 38 136283.0 39 218658.0 40 170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.790417100004696 19.257565690725404 22.13474050225004 15.817276707019861 2 36.78381850594059 21.73196732856531 24.288460143097584 17.19575402239652 3 32.040456580596604 22.423838025714314 28.949304074539356 16.586401319149722 4 28.135363655376405 24.45449203772495 28.15713133307819 19.253012973820454 5 22.301056941683964 35.90599777770506 24.076616534614164 17.716328745996808 6 24.81429894561922 33.41509254108471 26.620873922464384 15.149734590831681 7 78.66895630387678 5.381738198859829 11.32474102865793 4.6245644686054606 8 80.39841963814438 4.179394118743393 10.962800034714466 4.459386208397771 9 75.07615130385544 5.856928025813905 13.199891303883895 5.867029366446761 10 39.19775437238663 24.32602005756341 19.87701973460506 16.599205835444895 11 28.957982691139417 24.117164169548868 26.672234260048345 20.25261887926337 12 24.825538465478314 21.849199788867754 32.22384570842409 21.101416037229843 13 23.77841357733999 22.661432939191354 33.73136409357541 19.828789389893252 14 20.612568059560918 24.94447819462011 33.27082832415913 21.172125421659835 15 19.646396168888725 23.495718312023296 34.91848502654092 21.93940049254706 16 23.631303912348816 23.27434245252014 32.12269002969225 20.97166360543879 17 23.55760680744995 23.538684577813758 30.19504123765609 22.7086673770802 18 24.711862815257863 22.92307188882265 30.30217235732568 22.06289293859381 19 23.5621595243549 25.819311202386764 28.416778469063576 22.20175080419476 20 25.7182977960582 25.53732729908647 27.775414475078854 20.968960429776477 21 25.066690189037345 25.627101185555933 28.965665400916517 20.3405432244902 22 24.23752662272346 22.45158114435385 29.420937091411442 23.889955141511248 23 22.92933187456696 25.29973238560943 29.267994257885803 22.502941481937807 24 22.724317341440965 24.111473273417683 30.473468330874393 22.690741054266965 25 23.87900016645871 24.55991588855518 29.023001179438225 22.538082765547884 26 22.286687428952717 24.134521402748987 29.35165043101425 24.227140737284046 27 22.680497441230827 23.066055654118713 30.443448853782385 23.809998050868074 28 21.480429719566864 24.832936630448856 30.44857066030045 23.238062989683826 29 22.14654911172225 24.693794220041347 29.700075546646143 23.459581121590265 30 23.819103484677974 22.787201743690574 31.54918997207193 21.844504799559523 31 25.397900343872397 23.014695316534755 29.600911681560216 21.986492658032628 32 24.38677037376383 23.881845614524305 28.993550791959333 22.73783321975253 33 23.59616262873874 22.393818548622306 29.708185073633082 24.301833749005873 34 22.622308028289446 23.016118040567555 31.6039648473346 22.757609083808404 35 22.13730140550907 23.70187102437553 30.862156536634433 23.298671033480964 36 24.667900642644447 24.842326609065314 28.70829462338361 21.781478124906634 37 24.08316106516503 23.961944977570756 28.23851114775416 23.716382809510055 38 22.481031531832738 25.900406472256172 28.011159847313255 23.607402148597835 39 23.430699823724492 23.613093044729023 28.13579047258624 24.820416658960244 40 24.072490634919056 22.346726383136737 30.33603318930624 23.244749792637972 41 21.84735024762512 23.701301934762412 29.263299268577576 25.188048549034896 42 23.24716842349373 24.3149228101076 28.985441264972394 23.45246750142628 43 23.13278141125688 22.978415853698444 29.23086116062981 24.657941574414867 44 23.71794780594613 23.296536947431772 29.082755588815683 23.902759657806417 45 23.856094309530686 22.225225750735905 28.99497351599213 24.92370642374128 46 23.51165282119062 22.853500683618897 28.978043100001848 24.656803395188632 47 22.224656661122786 24.393172631911415 29.57359538013052 23.808575326835278 48 22.25794840349023 24.12399324490629 29.811617110817394 23.806441240786082 49 23.79064900402204 22.97983857773124 29.841352043102848 23.388160375143872 50 22.19819399411277 22.960204986078644 30.88363966952966 23.957961350278925 51 22.186812201850394 22.411460326628983 29.508292347025154 25.89343512449547 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 300.0 1 768.5 2 1237.0 3 6823.0 4 12409.0 5 7718.0 6 3027.0 7 2922.0 8 2817.0 9 2860.0 10 2903.0 11 2877.0 12 2851.0 13 2751.0 14 2651.0 15 2543.0 16 2435.0 17 2373.0 18 2311.0 19 2383.5 20 2456.0 21 2445.0 22 2434.0 23 2717.5 24 3001.0 25 3365.0 26 4476.0 27 5223.0 28 6020.0 29 6817.0 30 7669.0 31 8521.0 32 10077.0 33 11633.0 34 13073.0 35 14513.0 36 16026.0 37 17539.0 38 18737.0 39 19935.0 40 22247.0 41 24559.0 42 27754.0 43 30949.0 44 34325.5 45 37702.0 46 43741.5 47 49781.0 48 56111.5 49 62442.0 50 62713.0 51 62984.0 52 58063.5 53 53143.0 54 48936.5 55 44730.0 56 43684.0 57 42638.0 58 39971.5 59 37305.0 60 34785.5 61 32266.0 62 29980.5 63 27695.0 64 24474.5 65 21254.0 66 18332.5 67 15411.0 68 13019.5 69 10628.0 70 8843.0 71 7058.0 72 6275.5 73 5493.0 74 4760.5 75 3151.0 76 2274.0 77 1679.5 78 1085.0 79 772.0 80 459.0 81 309.5 82 160.0 83 107.0 84 54.0 85 38.5 86 23.0 87 12.5 88 2.0 89 4.0 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 702877.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.53714458005183 #Duplication Level Percentage of deduplicated Percentage of total 1 70.96596893037801 25.2192789814231 2 9.3422942736267 6.639969246225247 3 3.9024611020323965 4.160469732028611 4 2.30298036628242 3.273653849663964 5 1.7410180737571306 3.0935405501795255 6 1.42698147120349 3.04265081131281 7 1.1926776057723847 2.966904955960631 8 1.0748640882895617 3.05580804075614 9 0.9615863763542312 3.0754830674437605 >10 7.004294366006548 39.932182076525166 >50 0.052385941260638995 1.2732797980142687 >100 0.028020386843988596 1.9362569293578074 >500 0.0032487405036508515 0.8761284801469217 >1k 8.121851259127129E-4 0.33884857048014694 >5k 4.0609256295635643E-4 1.1155449104819148 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7730 1.0997656773517983 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTT 1190 0.16930415990279948 No Hit CGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTG 1158 0.16475144299785024 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTC 926 0.13174424543696833 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 899 0.12790289054841744 No Hit CCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 850 0.12093154278771392 No Hit GCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 795 0.11310656060733244 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCT 754 0.10727339207286624 No Hit CTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGCT 730 0.1038588543941543 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.2681720983899033E-4 0.0 0.0 0.10755793687942557 0.0 2 4.2681720983899033E-4 0.0 0.0 0.411736335091346 0.0 3 4.2681720983899033E-4 0.0 0.0 0.730426518437792 0.0 4 4.2681720983899033E-4 0.0 0.0 1.0549498703187044 0.0 5 4.2681720983899033E-4 0.0 0.0 1.9087265623999647 0.0 6 4.2681720983899033E-4 0.0 0.0 3.0214390284502124 0.0 7 4.2681720983899033E-4 0.0 0.0 3.835806264823006 0.0 8 4.2681720983899033E-4 0.0 0.0 5.042703061844391 0.0 9 4.2681720983899033E-4 0.0 0.0 5.733008762557318 0.0 10 4.2681720983899033E-4 0.0 0.0 6.7037333701344615 0.0 11 4.2681720983899033E-4 0.0 0.0 7.699924737898665 0.0 12 7.113620163983172E-4 0.0 0.0 8.515287881094416 0.0 13 7.113620163983172E-4 0.0 0.0 8.878224781860837 0.0 14 7.113620163983172E-4 0.0 0.0 9.068869802255586 0.0 15 7.113620163983172E-4 0.0 0.0 9.295225195873531 0.0 16 7.113620163983172E-4 0.0 0.0 9.707103803368156 0.0 17 7.113620163983172E-4 0.0 0.0 10.198512684296114 0.0 18 7.113620163983172E-4 0.0 0.0 10.744411895680184 0.0 19 7.113620163983172E-4 0.0 0.0 11.047452114665866 0.0 20 7.113620163983172E-4 0.0 0.0 11.369414563287744 0.0 21 7.113620163983172E-4 0.0 0.0 11.741883715073904 0.0 22 7.113620163983172E-4 0.0 0.0 12.1490673332603 0.0 23 7.113620163983172E-4 0.0 0.0 12.579583625584561 0.0 24 7.113620163983172E-4 0.0 0.0 12.934980088977161 0.0 25 7.113620163983172E-4 0.0 0.0 13.241292573238276 0.0 26 7.113620163983172E-4 0.0 0.0 13.522565114522171 0.0 27 7.113620163983172E-4 0.0 0.0 13.841539842675177 0.0 28 8.536344196779807E-4 0.0 0.0 14.15283186105108 0.0 29 8.536344196779807E-4 0.0 0.0 14.500687887069857 0.0 30 8.536344196779807E-4 0.0 0.0 14.970613635102586 0.0 31 8.536344196779807E-4 0.0 0.0 15.325156464075507 0.0 32 8.536344196779807E-4 0.0 0.0 15.699617429507581 0.0 33 8.536344196779807E-4 0.0 0.0 16.06269660267728 0.0 34 9.95906822957644E-4 0.0 0.0 16.433885302833925 0.0 35 9.95906822957644E-4 0.0 0.0 16.844910275908873 0.0 36 9.95906822957644E-4 0.0 0.0 17.211688531563844 0.0 37 9.95906822957644E-4 0.0 0.0 17.565662270923646 0.0 38 0.0011381792262373075 0.0 0.0 17.954635021490247 0.0 39 0.0011381792262373075 0.0 0.0 18.438076647834542 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGTT 20 7.031413E-4 45.000004 39 CCGGTAT 50 2.1827873E-11 45.000004 42 CGTTTTT 2785 0.0 42.25314 1 ACCGGTA 55 6.002665E-11 40.909092 41 GCGTAAG 55 6.002665E-11 40.909092 1 CGTTATT 370 0.0 40.743244 1 CATACGA 95 0.0 40.263157 18 CGTAAGG 125 0.0 39.6 2 GTTCGAT 40 3.4556615E-7 39.375004 39 AACGGGA 265 0.0 39.056602 4 CGGGTAC 70 0.0 38.571426 6 GTACGAG 70 0.0 38.571426 1 ACGGGAT 200 0.0 38.250004 5 GTAGGGC 295 0.0 38.135593 4 CACGGGA 275 0.0 37.636364 4 CTCGTAG 30 1.1394706E-4 37.500004 1 CGCATCG 30 1.1394706E-4 37.500004 21 GACACGG 110 0.0 36.81818 2 GTTACGG 80 0.0 36.562504 2 AGCGCAA 105 0.0 36.428574 43 >>END_MODULE