SRR2936418.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936418.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	262975
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC	6050	2.3005989162467917	No Hit
GAATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC	5570	2.118072060081757	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG	5454	2.0739614031752067	No Hit
GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC	1926	0.7323890103622017	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT	1065	0.40498146211617075	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGGTAGT	1035	0.39357353360585606	No Hit
GAACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCT	896	0.34071679817473144	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTA	874	0.332350983933834	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTC	829	0.315239091168362	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC	720	0.27379028424755203	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	629	0.23918623443293088	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG	552	0.2099058845897899	No Hit
CCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC	549	0.20876509173875843	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTT	457	0.17378077764046013	No Hit
GAATATGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC	447	0.16997813480368856	No Hit
CTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGCT	445	0.16921760623633425	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATG	283	0.10761479228063504	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGG	30	2.159095E-6	45.000004	2
TTTCGAC	30	2.159095E-6	45.000004	24
ACGGGCG	30	2.159095E-6	45.000004	5
TCGACGT	30	2.159095E-6	45.000004	26
AGTACGG	30	2.159095E-6	45.000004	2
CTAATGG	30	2.159095E-6	45.000004	2
GTACGAG	30	2.159095E-6	45.000004	1
CGGCGAA	210	0.0	45.0	31
CGAACGC	40	6.7811925E-9	45.0	34
GCGACAA	25	3.8825747E-5	45.0	11
CAACGAT	25	3.8825747E-5	45.0	42
CGTGCGT	20	7.0233556E-4	45.0	11
GGCGTGC	35	1.2071541E-7	45.0	9
TAAACGG	20	7.0233556E-4	45.0	2
GATCACC	20	7.0233556E-4	45.0	35
AGGGTCC	20	7.0233556E-4	45.0	6
AGGGTAC	20	7.0233556E-4	45.0	6
TATGCGG	25	3.8825747E-5	45.0	2
TACGCGG	20	7.0233556E-4	45.0	2
GCGATAT	25	3.8825747E-5	45.0	9