##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936417.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 610256 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09471762670093 33.0 31.0 34.0 30.0 34.0 2 32.201335177368186 33.0 31.0 34.0 30.0 34.0 3 32.14934224325529 33.0 31.0 34.0 30.0 34.0 4 35.78230611415537 37.0 35.0 37.0 35.0 37.0 5 31.979892045305576 37.0 35.0 37.0 0.0 37.0 6 33.82673500956975 37.0 35.0 37.0 17.0 37.0 7 35.536912377756224 37.0 35.0 37.0 32.0 37.0 8 35.809674956084 37.0 35.0 37.0 35.0 37.0 9 37.757414920951206 39.0 38.0 39.0 35.0 39.0 10 37.35417267507407 39.0 37.0 39.0 34.0 39.0 11 37.331760769250934 39.0 37.0 39.0 34.0 39.0 12 37.30287780865735 39.0 37.0 39.0 34.0 39.0 13 37.27635779082877 39.0 37.0 39.0 34.0 39.0 14 38.46004135969167 40.0 38.0 41.0 34.0 41.0 15 38.6081415012716 40.0 38.0 41.0 34.0 41.0 16 38.538020109593354 40.0 38.0 41.0 34.0 41.0 17 38.548283015652444 40.0 38.0 41.0 34.0 41.0 18 38.455962743504365 40.0 38.0 41.0 34.0 41.0 19 38.312355798222384 40.0 37.0 41.0 34.0 41.0 20 38.40090388296059 40.0 37.0 41.0 34.0 41.0 21 38.31059915838599 40.0 37.0 41.0 34.0 41.0 22 38.39002320337694 40.0 37.0 41.0 34.0 41.0 23 38.399160352376704 40.0 37.0 41.0 34.0 41.0 24 38.36434709367872 40.0 37.0 41.0 34.0 41.0 25 38.101386958915604 40.0 37.0 41.0 34.0 41.0 26 38.168154020607744 40.0 37.0 41.0 34.0 41.0 27 38.15032543719357 40.0 37.0 41.0 34.0 41.0 28 38.081364214362495 40.0 37.0 41.0 34.0 41.0 29 38.05567171809864 40.0 37.0 41.0 34.0 41.0 30 37.890981817466766 40.0 36.0 41.0 34.0 41.0 31 37.876610799402215 40.0 37.0 41.0 33.0 41.0 32 37.7995890249338 40.0 36.0 41.0 33.0 41.0 33 37.70580543247424 40.0 36.0 41.0 33.0 41.0 34 37.61883045803728 40.0 36.0 41.0 33.0 41.0 35 37.58329455179466 40.0 36.0 41.0 33.0 41.0 36 37.48047540704229 40.0 36.0 41.0 33.0 41.0 37 37.42926247345376 40.0 36.0 41.0 33.0 41.0 38 37.277426194908365 40.0 35.0 41.0 33.0 41.0 39 37.19716479641331 40.0 35.0 41.0 32.0 41.0 40 37.12168991374112 40.0 35.0 41.0 32.0 41.0 41 37.02112064445085 40.0 35.0 41.0 32.0 41.0 42 37.00345264937993 40.0 35.0 41.0 32.0 41.0 43 36.92778768254634 39.0 35.0 41.0 32.0 41.0 44 36.85214074093495 39.0 35.0 41.0 32.0 41.0 45 36.81546924569361 39.0 35.0 41.0 32.0 41.0 46 36.701920177761465 39.0 35.0 41.0 31.0 41.0 47 36.64605018221861 39.0 35.0 41.0 31.0 41.0 48 36.592538213471066 39.0 35.0 41.0 31.0 41.0 49 36.55431327180724 39.0 35.0 41.0 31.0 41.0 50 36.44738929236255 39.0 35.0 41.0 31.0 41.0 51 35.42744028735481 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 28.0 10 27.0 11 23.0 12 15.0 13 9.0 14 22.0 15 28.0 16 41.0 17 63.0 18 139.0 19 255.0 20 391.0 21 684.0 22 1093.0 23 1641.0 24 2217.0 25 3337.0 26 4583.0 27 5226.0 28 6055.0 29 6520.0 30 8070.0 31 10279.0 32 13580.0 33 19933.0 34 34134.0 35 44324.0 36 46935.0 37 74090.0 38 122121.0 39 204237.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.919089693505676 19.273550772134975 22.46663695236098 12.340722581998374 2 34.724935109200075 22.719973257124877 24.34486510579167 18.210226527883382 3 33.78729582339215 23.332011483705198 26.33124459243334 16.54944810046931 4 28.66649406150861 25.603844943761306 25.46226501664875 20.26739597808133 5 22.13267874465798 37.348751999161 22.595926955245012 17.922642300936 6 25.123718570567107 35.026611782596156 24.840886447654757 15.008783199181982 7 81.20395375055715 5.401339765606565 9.12371201594085 4.270994467895441 8 82.09210560813823 4.573490469573425 8.682913400277917 4.651490522010435 9 76.1529587582916 6.760933116593691 10.787767756482525 6.298340368632181 10 37.05936524999345 29.488608059568445 17.798759864712512 15.653266825725598 11 29.123351511496814 25.41818515508246 26.161479772423373 19.29698356099735 12 25.721008888073204 23.88767992449071 30.4101885110511 19.981122676384995 13 25.03850842924936 23.87211268713458 32.049992134448495 19.039386749167562 14 21.453455598961746 27.350325109462258 30.78249128234708 20.41372800922891 15 20.4661650192706 25.661689520463543 33.59803099027294 20.27411446999292 16 23.92225557798694 25.115033690778954 30.694987021840014 20.26772370939409 17 24.006318659710026 24.215247371594874 29.079271649930522 22.699162318764586 18 25.194344668467007 23.785100023596655 29.96627644791694 21.0542788600194 19 24.261129755381347 25.98319393828164 27.83651451194253 21.919161794394483 20 25.2151556068273 26.15148396738418 27.79456490390918 20.83879552187934 21 24.507092105608137 26.83037938176765 28.935069872315882 19.727458640308328 22 24.026965732413938 23.733318476180486 28.815611808814662 23.424103982590914 23 21.69581290474817 27.246762014629926 28.831506777483547 22.225918303138357 24 21.865249993445374 25.373777562203404 30.129814372984455 22.631158071366773 25 22.719809391468498 26.552135497233948 27.987107050156002 22.74094806114155 26 21.86443066516347 26.238660496578486 28.46788888597572 23.42901995228232 27 22.550208437114915 25.211386696730553 29.219049054822893 23.01935581133164 28 20.555799533310612 26.067420885661104 30.44869694030046 22.928082640727826 29 21.95799795495661 25.45030282373299 29.47844838887287 23.113250832437533 30 23.00247764872447 24.53888204294591 29.50270050601715 22.95593980231247 31 23.220255106053852 25.12650428672557 28.124262604546292 23.528978002674286 32 23.569616685456594 25.42801709446527 28.51606538895152 22.48630083112661 33 22.868107810492646 25.58860543771794 27.388014210429724 24.155272541359693 34 21.440674077764086 25.567466768044888 29.903188170210537 23.088670983980496 35 21.961111402427832 25.1196219291576 29.54825515849086 23.371011509923704 36 22.96183896594216 27.10960646023964 27.929917936079285 21.998636637738915 37 22.472372250334285 26.31240004194961 28.093291995490414 23.12193571222569 38 22.22264099001075 27.280518339844264 28.1183634409166 22.378477229228388 39 23.772318502398992 25.02884035552293 27.060446763325558 24.138394378752523 40 24.076780891953543 24.175100285781706 29.410771872787812 22.33734694947694 41 21.203396607325452 24.475629899583126 29.114338900395897 25.206634592695526 42 23.182729870742772 24.7491216800818 29.047153981279987 23.020994467895438 43 23.409356073516687 24.16477674942975 28.928351380404287 23.497515796649274 44 22.857948139797067 24.691768700348707 28.745968904853047 23.70431425500118 45 22.856637214546026 24.10709603838389 28.06527096824939 24.970995778820694 46 23.17732230408222 24.803688943656432 27.961216276447914 24.05777247581343 47 21.65206077449464 25.025399176738944 29.695406517920347 23.62713353084607 48 21.801014656144307 25.02818489289741 29.385372696048872 23.785427754909417 49 23.31382239584699 23.80558323064419 29.446658451535097 23.433935921973728 50 21.336619385962614 24.83121837392832 29.51023832621064 24.32192391389843 51 21.46935056763063 23.901936236595787 28.2637122781259 26.365000917647674 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 184.0 1 522.5 2 861.0 3 2842.5 4 4824.0 5 3143.0 6 1462.0 7 1442.5 8 1423.0 9 1427.5 10 1432.0 11 1536.0 12 1640.0 13 1530.0 14 1420.0 15 1479.5 16 1539.0 17 1492.0 18 1445.0 19 1501.0 20 1557.0 21 1812.0 22 2067.0 23 2306.0 24 2545.0 25 2944.0 26 4185.0 27 5027.0 28 5729.5 29 6432.0 30 7401.5 31 8371.0 32 9765.0 33 11159.0 34 13167.5 35 15176.0 36 16429.0 37 17682.0 38 19727.5 39 21773.0 40 23778.0 41 25783.0 42 29196.0 43 32609.0 44 35490.0 45 38371.0 46 44677.5 47 50984.0 48 55287.5 49 59591.0 50 59745.5 51 59900.0 52 54500.5 53 49101.0 54 44502.5 55 39904.0 56 36020.0 57 32136.0 58 30558.0 59 28980.0 60 25771.0 61 22562.0 62 20522.5 63 18483.0 64 15909.0 65 13335.0 66 11389.0 67 9443.0 68 7844.5 69 6246.0 70 5223.0 71 4200.0 72 3339.5 73 2479.0 74 2396.5 75 1778.5 76 1243.0 77 938.5 78 634.0 79 492.5 80 351.0 81 256.5 82 162.0 83 107.5 84 53.0 85 33.5 86 14.0 87 11.5 88 9.0 89 6.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 610256.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.51349472271016 #Duplication Level Percentage of deduplicated Percentage of total 1 71.69737706247278 26.179217990027603 2 9.821418705530368 7.172286401478201 3 3.8947558220801497 4.266334384673046 4 2.1756438330452212 3.1776143846557434 5 1.5751192565473286 2.8756554330790025 6 1.174477326415028 2.573056299599872 7 1.0087426798906391 2.5782904363131554 8 0.8810861369704341 2.5737227210018427 9 0.8030465965926661 2.6389833900099 >10 6.883720569540852 41.64204445259772 >50 0.057011301475508896 1.4122394048054199 >100 0.024885885559781207 1.7590211676007832 >500 0.001809882586165906 0.49216906718162234 >1k 9.04941293082953E-4 0.6593644669761177 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2796 0.45816837523924386 No Hit GCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 1195 0.19581945937442646 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 861 0.14108833014341524 TruSeq Adapter, Index 19 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 798 0.130764793791458 No Hit CTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGCT 766 0.1255210927872893 TruSeq Adapter, Index 13 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.277313127605464E-4 0.0 0.0 0.12994546550955666 0.0 2 3.277313127605464E-4 0.0 0.0 0.5738575286437168 0.0 3 3.277313127605464E-4 0.0 0.0 0.8517736818646601 0.0 4 3.277313127605464E-4 0.0 0.0 1.2035932461131067 0.0 5 3.277313127605464E-4 0.0 0.0 2.221035106578223 0.0 6 3.277313127605464E-4 0.0 0.0 3.155560944914921 0.0 7 3.277313127605464E-4 0.0 0.0 3.884926981463517 0.0 8 3.277313127605464E-4 0.0 0.0 5.1094950315932985 0.0 9 3.277313127605464E-4 0.0 0.0 5.654184473401327 0.0 10 3.277313127605464E-4 0.0 0.0 6.7240633439081305 0.0 11 3.277313127605464E-4 0.0 0.0 7.907501114286464 0.0 12 3.277313127605464E-4 0.0 0.0 8.897905141448835 0.0 13 3.277313127605464E-4 0.0 0.0 9.323300385412024 0.0 14 3.277313127605464E-4 0.0 0.0 9.542388767992449 0.0 15 3.277313127605464E-4 0.0 0.0 9.860288141370178 0.0 16 3.277313127605464E-4 0.0 0.0 10.431523819511812 0.0 17 3.277313127605464E-4 0.0 0.0 11.130410843973676 0.0 18 4.915969691408196E-4 0.0 0.0 11.887634042106919 0.0 19 4.915969691408196E-4 0.0 0.0 12.339411656747332 0.0 20 4.915969691408196E-4 0.0 0.0 12.801512807739703 0.0 21 4.915969691408196E-4 0.0 0.0 13.328668624315041 0.0 22 4.915969691408196E-4 0.0 0.0 13.908589182244828 0.0 23 6.554626255210928E-4 0.0 0.0 14.451148370519913 0.0 24 6.554626255210928E-4 0.0 0.0 14.896535224561495 0.0 25 6.554626255210928E-4 0.0 0.0 15.300136336226108 0.0 26 6.554626255210928E-4 0.0 0.0 15.689481135785638 0.0 27 6.554626255210928E-4 0.0 0.0 16.11733436459453 0.0 28 8.19328281901366E-4 0.0 0.0 16.549611966125692 0.0 29 8.19328281901366E-4 0.0 0.0 16.991721507039667 0.0 30 8.19328281901366E-4 0.0 0.0 17.573444587189638 0.0 31 8.19328281901366E-4 0.0 0.0 18.02849951495766 0.0 32 8.19328281901366E-4 0.0 0.0 18.503054455834928 0.0 33 8.19328281901366E-4 0.0 0.0 18.956306861382764 0.0 34 8.19328281901366E-4 0.0 0.0 19.412508848745446 0.0 35 8.19328281901366E-4 0.0 0.0 19.88280328255683 0.0 36 8.19328281901366E-4 0.0 0.0 20.330484255787734 0.0 37 8.19328281901366E-4 0.0 0.0 20.76538370782098 0.0 38 8.19328281901366E-4 0.0 0.0 21.227976455782493 0.0 39 8.19328281901366E-4 0.0 0.0 21.792002045043393 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATCG 20 7.0306833E-4 45.0 20 TTGTCGG 25 3.888648E-5 45.0 2 TACGAAT 50 2.1827873E-11 45.0 12 CGAATAT 50 2.1827873E-11 45.0 14 ACGCTTG 20 7.0306833E-4 45.0 17 TATAGCG 40 6.8066583E-9 45.0 1 CGGTCTA 25 3.888648E-5 45.0 31 GCGTAAG 55 1.8189894E-12 45.0 1 TTACGGG 135 0.0 41.666668 3 TTAACGG 65 0.0 41.538464 2 CGTTTTT 1320 0.0 41.25 1 ACGGGAT 225 0.0 41.0 5 GTTACGG 40 3.454661E-7 39.375 2 CGTGCGG 110 0.0 38.863636 2 CGTAAGG 105 0.0 38.57143 2 ACGGGCG 135 0.0 38.333336 5 CTACGAA 65 9.094947E-12 38.076927 11 CGTTATT 180 0.0 37.500004 1 CGGTAGT 150 0.0 37.5 12 ATTTACG 30 1.1392946E-4 37.499996 1 >>END_MODULE