##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936412.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 557663 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00759239899366 33.0 31.0 34.0 30.0 34.0 2 32.092086080661616 33.0 31.0 34.0 30.0 34.0 3 32.06776852687017 33.0 31.0 34.0 30.0 34.0 4 35.69389577576422 37.0 35.0 37.0 33.0 37.0 5 32.09722717842138 37.0 35.0 37.0 0.0 37.0 6 33.84716934779607 37.0 35.0 37.0 17.0 37.0 7 35.447702286147724 37.0 35.0 37.0 32.0 37.0 8 35.68483116147207 37.0 35.0 37.0 33.0 37.0 9 37.56693020695295 39.0 37.0 39.0 35.0 39.0 10 37.231105524304105 39.0 37.0 39.0 34.0 39.0 11 37.25263644889476 39.0 37.0 39.0 34.0 39.0 12 37.183374188353895 39.0 37.0 39.0 34.0 39.0 13 37.12255430250886 39.0 37.0 39.0 33.0 39.0 14 38.306769500576515 40.0 38.0 41.0 33.0 41.0 15 38.44095986285624 40.0 38.0 41.0 34.0 41.0 16 38.37701443344816 40.0 38.0 41.0 34.0 41.0 17 38.35381942140683 40.0 37.0 41.0 34.0 41.0 18 38.266856506528136 40.0 37.0 41.0 34.0 41.0 19 38.15437459540977 40.0 37.0 41.0 34.0 41.0 20 38.2526884516276 40.0 37.0 41.0 34.0 41.0 21 38.15347441017245 40.0 37.0 41.0 34.0 41.0 22 38.230944136512555 40.0 37.0 41.0 34.0 41.0 23 38.24041939307431 40.0 37.0 41.0 34.0 41.0 24 38.217941660106554 40.0 37.0 41.0 34.0 41.0 25 37.92543525390783 40.0 36.0 41.0 33.0 41.0 26 37.97717797307693 40.0 37.0 41.0 34.0 41.0 27 37.93820461461492 40.0 37.0 41.0 33.0 41.0 28 37.78626159526453 40.0 36.0 41.0 33.0 41.0 29 37.69866747480109 40.0 36.0 41.0 33.0 41.0 30 37.56665226131194 40.0 36.0 41.0 33.0 41.0 31 37.59901409991339 40.0 36.0 41.0 33.0 41.0 32 37.55614053648888 40.0 36.0 41.0 33.0 41.0 33 37.494626683140176 40.0 36.0 41.0 33.0 41.0 34 37.4025800528276 40.0 36.0 41.0 33.0 41.0 35 37.397483785009946 40.0 36.0 41.0 33.0 41.0 36 37.288590062457075 40.0 35.0 41.0 32.0 41.0 37 37.26460066384178 40.0 35.0 41.0 32.0 41.0 38 37.12495898060298 39.0 35.0 41.0 32.0 41.0 39 37.02335639983287 39.0 35.0 41.0 32.0 41.0 40 36.94864999112367 39.0 35.0 41.0 31.0 41.0 41 36.80894195957057 39.0 35.0 41.0 31.0 41.0 42 36.78074033959578 39.0 35.0 41.0 31.0 41.0 43 36.683529299953555 39.0 35.0 41.0 31.0 41.0 44 36.61586836494442 39.0 35.0 41.0 31.0 41.0 45 36.574791585599186 39.0 35.0 41.0 31.0 41.0 46 36.41063868321908 39.0 35.0 41.0 31.0 41.0 47 36.31844142430106 38.0 35.0 41.0 31.0 41.0 48 36.280490188518876 38.0 35.0 40.0 31.0 41.0 49 36.199385650473495 38.0 35.0 40.0 31.0 41.0 50 36.0598210747351 38.0 35.0 40.0 30.0 41.0 51 35.01022660639131 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 33.0 10 21.0 11 27.0 12 18.0 13 13.0 14 14.0 15 24.0 16 40.0 17 82.0 18 157.0 19 250.0 20 470.0 21 816.0 22 1271.0 23 1808.0 24 2331.0 25 3183.0 26 4067.0 27 4828.0 28 5356.0 29 6592.0 30 8088.0 31 10528.0 32 13781.0 33 20284.0 34 33465.0 35 44239.0 36 45974.0 37 70623.0 38 110919.0 39 168225.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.43431606543737 18.539153574829243 22.600746328876042 12.425784030857345 2 32.16655937367191 23.985274260619764 24.546365815913912 19.30180054979441 3 32.91306756948193 25.05796511513226 24.8571269745348 17.171840340851016 4 27.92654345007648 25.30004680245955 25.867235229878975 20.906174517584994 5 22.755319969228726 36.84286029376164 21.785737981540823 18.616081755468805 6 24.60733453716671 35.0510971680029 24.375832716174465 15.965735578655927 7 79.44798202498642 6.088444096165605 9.572985835531494 4.890588043316483 8 79.52795864168863 6.123949410306942 8.937117936818472 5.410974011185967 9 73.52002912153038 7.6062066158235355 11.016689290844111 7.857074971801967 10 38.212863324265726 27.381769993705873 17.357256981366884 17.04810970066151 11 29.29385668405471 24.938717469152515 24.546365815913912 21.221060030878864 12 25.710509752305605 21.285256507962693 31.064101437606585 21.940132302125118 13 24.99089952175418 23.84289436451764 31.23786229317706 19.928343820551124 14 20.717171481701314 28.20484773061867 30.222195125012774 20.85578566266724 15 19.059001583393556 24.030821481790973 34.70985164875561 22.20032528605986 16 21.553698201243403 24.860175410597442 30.306834055693134 23.279292332466024 17 22.53690849132899 23.09817936639153 27.863960850908164 26.50095129137131 18 25.52096875711675 22.47880888637044 29.17299516015945 22.827227196353352 19 24.13823402305694 24.950911213403078 26.225695446891763 24.685159316648225 20 25.766636839811856 24.04821549932486 26.68439541443488 23.500752246428398 21 25.317799459530217 26.472080808660426 27.386073668147247 20.824046063662106 22 23.65353268909718 23.654787927475912 26.736398147268154 25.955281236158754 23 21.81263594679941 26.595811448849933 26.709500182009567 24.88205242234109 24 22.822385562606804 23.29901750698899 28.40084423746958 25.477752692934626 25 22.0262057909526 26.94835411350583 26.080087794958608 24.945352300582968 26 22.05346239574797 25.179185278564294 26.562637291697673 26.204715033990063 27 23.509718234847927 24.75581130539412 25.888753602085846 25.84571685767211 28 20.29702526436217 25.632147013518917 27.815006554137533 26.25582116798138 29 21.118130483822668 26.108599638132706 27.562703640011975 25.210566238032644 30 22.513776241206607 24.510860501772576 27.750451437516922 25.22491181950389 31 23.717370526644228 25.189047865825774 24.01432406309904 27.079257544430956 32 22.61276075335821 26.32091424390716 25.456951599801315 25.60937340293331 33 22.030509465393973 23.86746117278715 26.043865201743703 28.058164160075172 34 21.080473332460645 24.873624393226734 27.475733552342547 26.570168721970077 35 20.67879705126573 25.414094175155967 27.62654147755903 26.28056729601928 36 21.884722493692426 27.63174175084235 26.486067750594895 23.997468004870328 37 20.80163109261328 25.943266811676587 25.85844856122784 27.396653534482297 38 20.172756664867492 26.83538265941976 26.279312057640546 26.71254861807221 39 21.837561394605704 24.2189279188327 26.42904406424669 27.51446662231491 40 23.804878573618833 22.49907202019858 29.272158992079444 24.42389041410314 41 19.781660250007622 25.30327455829058 26.844169328070894 28.070895863630902 42 22.33158735652177 25.02801871381103 27.613271814698127 25.027122114969075 43 22.228119850160404 24.571291263720205 26.49754421577189 26.703044670347502 44 21.755253620914424 23.345461327002152 27.116556056256197 27.782728995827227 45 21.976175575571627 22.146350035774294 27.22002356261757 28.657450826036513 46 23.03039649393989 23.778159928128638 27.42086170321502 25.770581874716452 47 20.279810566596673 24.877210788594546 29.17227788108589 25.67070076372289 48 21.00372447158947 24.477686344620317 27.78577743188987 26.732811751900343 49 22.5367291715606 23.118083860682887 29.396965550879294 24.948221416877217 50 20.89308417449248 23.438169647260086 30.087884618488225 25.58086155975921 51 21.158477431710548 22.493513107378472 27.062580805970633 29.285428654940347 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 197.0 1 527.0 2 857.0 3 1534.5 4 2212.0 5 1481.5 6 751.0 7 776.0 8 801.0 9 842.5 10 884.0 11 826.0 12 768.0 13 791.0 14 814.0 15 830.5 16 847.0 17 921.0 18 995.0 19 994.0 20 993.0 21 1000.5 22 1008.0 23 1474.0 24 1940.0 25 2231.5 26 3103.5 27 3684.0 28 4211.5 29 4739.0 30 5808.5 31 6878.0 32 7566.5 33 8255.0 34 10193.5 35 12132.0 36 12813.0 37 13494.0 38 14982.5 39 16471.0 40 18317.5 41 20164.0 42 23634.0 43 27104.0 44 31010.0 45 34916.0 46 42313.5 47 49711.0 48 51619.0 49 53527.0 50 53788.5 51 54050.0 52 48873.5 53 43697.0 54 40542.0 55 37387.0 56 34592.5 57 31798.0 58 29841.0 59 27884.0 60 26173.5 61 24463.0 62 22722.0 63 20981.0 64 18627.0 65 16273.0 66 13813.0 67 11353.0 68 9905.0 69 8457.0 70 7045.5 71 5634.0 72 4686.5 73 3739.0 74 3104.5 75 1988.0 76 1506.0 77 1188.0 78 870.0 79 559.5 80 249.0 81 162.5 82 76.0 83 70.5 84 65.0 85 44.0 86 23.0 87 16.0 88 9.0 89 8.5 90 8.0 91 5.0 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 557663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.78708288643975 #Duplication Level Percentage of deduplicated Percentage of total 1 72.8006370620959 26.05322432726844 2 10.087307240175287 7.219906006102736 3 3.7989444200517126 4.078594165241053 4 2.0523594397097313 2.9379182952663676 5 1.2908376030209163 2.309765614612137 6 0.9780943112657998 2.1001885312814625 7 0.7646042293645463 1.9154068452113986 8 0.7082515532531547 2.0277005632576275 9 0.6260781206679981 2.0164958637958867 >10 6.778715481716439 43.19534748459212 >50 0.07002459705616844 1.6926233945913294 >100 0.040086544691523875 2.672314759659011 >500 0.0010148492326968069 0.24133639002356794 >1k 0.003044547698090421 1.5391777590968863 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 1843 0.3304863331438521 TruSeq Adapter, Index 16 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTC 1739 0.31183707723123105 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGC 1415 0.25373747227268084 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCG 1250 0.22414971048823393 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1120 0.2008381405974576 No Hit CCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 1109 0.19886562314516115 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGCT 821 0.14722152984867204 TruSeq Adapter, Index 13 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7931976839058716E-4 0.0 0.0 0.15511159965785787 0.0 2 1.7931976839058716E-4 0.0 0.0 0.8634246848006771 0.0 3 1.7931976839058716E-4 0.0 0.0 1.1766963201790328 0.0 4 1.7931976839058716E-4 0.0 0.0 1.6196161481037832 0.0 5 1.7931976839058716E-4 0.0 0.0 3.041621911441139 0.0 6 1.7931976839058716E-4 0.0 0.0 4.062489352888752 0.0 7 1.7931976839058716E-4 0.0 0.0 4.871580147867081 0.0 8 1.7931976839058716E-4 0.0 0.0 6.206615823535002 0.0 9 1.7931976839058716E-4 0.0 0.0 6.689703279579244 0.0 10 1.7931976839058716E-4 0.0 0.0 7.969149827046083 0.0 11 1.7931976839058716E-4 0.0 0.0 9.31530332835422 0.0 12 1.7931976839058716E-4 0.0 0.0 10.687278876310604 0.0 13 1.7931976839058716E-4 0.0 0.0 11.28459302481965 0.0 14 1.7931976839058716E-4 0.0 0.0 11.544068729680829 0.0 15 1.7931976839058716E-4 0.0 0.0 11.962780388872849 0.0 16 1.7931976839058716E-4 0.0 0.0 12.710005863756427 0.0 17 1.7931976839058716E-4 0.0 0.0 13.563926600832403 0.0 18 1.7931976839058716E-4 0.0 0.0 14.54982668744385 0.0 19 1.7931976839058716E-4 0.0 0.0 15.099441777561 0.0 20 3.586395367811743E-4 0.0 0.0 15.62466937917703 0.0 21 3.586395367811743E-4 0.0 0.0 16.25336448715443 0.0 22 3.586395367811743E-4 0.0 0.0 16.88044571721631 0.0 23 3.586395367811743E-4 0.0 0.0 17.49694708094315 0.0 24 3.586395367811743E-4 0.0 0.0 18.018946926728148 0.0 25 3.586395367811743E-4 0.0 0.0 18.47746757450288 0.0 26 5.379593051717614E-4 0.0 0.0 18.931146588531067 0.0 27 5.379593051717614E-4 0.0 0.0 19.37854941066558 0.0 28 7.172790735623486E-4 0.0 0.0 19.818958761832864 0.0 29 8.965988419529357E-4 0.0 0.0 20.26385110720991 0.0 30 8.965988419529357E-4 0.0 0.0 20.867082808075846 0.0 31 8.965988419529357E-4 0.0 0.0 21.33223828728103 0.0 32 8.965988419529357E-4 0.0 0.0 21.822319214292502 0.0 33 0.0010759186103435228 0.0 0.0 22.333739193742456 0.0 34 0.0010759186103435228 0.0 0.0 22.84175209759299 0.0 35 0.0010759186103435228 0.0 0.0 23.377380245775676 0.0 36 0.0010759186103435228 0.0 0.0 23.820300073700423 0.0 37 0.0010759186103435228 0.0 0.0 24.266806296992986 0.0 38 0.0010759186103435228 0.0 0.0 24.721561229631515 0.0 39 0.0010759186103435228 0.0 0.0 25.243202435879734 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 20 7.0301583E-4 45.000004 1 ATTACGG 50 2.1827873E-11 45.000004 2 TAAACGG 20 7.0301583E-4 45.000004 2 CGGGCTA 25 3.8882128E-5 45.000004 6 TTAACGG 40 6.8048394E-9 45.000004 2 ACGTAAG 30 2.1634842E-6 45.000004 1 GCTAACG 30 2.1634842E-6 45.000004 1 CCGACGG 35 1.2104283E-7 45.0 2 ACGGGCC 75 0.0 42.0 5 AACGGGC 130 0.0 41.538464 4 CCGGTAT 55 6.002665E-11 40.909092 42 TAACGGG 150 0.0 40.5 3 GCGAGAC 190 0.0 40.26316 21 TCAAGCG 190 0.0 40.26316 17 ACGTTAG 45 1.9252184E-8 40.000004 1 CGCGAGG 80 0.0 39.375004 2 AAACGGG 110 0.0 38.86364 3 TATACGG 70 0.0 38.571426 2 CGTAAGG 100 0.0 38.250004 2 TAATACG 65 9.094947E-12 38.076927 4 >>END_MODULE