##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936406.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 532711 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.932045705832994 33.0 31.0 34.0 30.0 34.0 2 32.03148048378952 33.0 31.0 34.0 30.0 34.0 3 31.996260636630367 33.0 31.0 34.0 30.0 34.0 4 35.65518451843495 37.0 35.0 37.0 33.0 37.0 5 32.03114258950913 37.0 35.0 37.0 0.0 37.0 6 33.811577008922285 37.0 35.0 37.0 17.0 37.0 7 35.49019637289262 37.0 35.0 37.0 32.0 37.0 8 35.733048500969566 37.0 35.0 37.0 35.0 37.0 9 37.65567821952241 39.0 37.0 39.0 35.0 39.0 10 37.229274409576675 39.0 37.0 39.0 34.0 39.0 11 37.216252339448594 39.0 37.0 39.0 34.0 39.0 12 37.265066799822044 39.0 37.0 39.0 34.0 39.0 13 37.23643589113046 39.0 37.0 39.0 34.0 39.0 14 38.42869961386192 40.0 38.0 41.0 34.0 41.0 15 38.55625845908945 40.0 38.0 41.0 34.0 41.0 16 38.50003848240416 40.0 38.0 41.0 34.0 41.0 17 38.49986765807351 40.0 38.0 41.0 34.0 41.0 18 38.424806320875675 40.0 38.0 41.0 34.0 41.0 19 38.29637458209048 40.0 37.0 41.0 34.0 41.0 20 38.37909485631046 40.0 37.0 41.0 34.0 41.0 21 38.333711900073396 40.0 37.0 41.0 34.0 41.0 22 38.43012815579179 40.0 38.0 41.0 34.0 41.0 23 38.417350120421766 40.0 38.0 41.0 34.0 41.0 24 38.38007662691403 40.0 37.0 41.0 34.0 41.0 25 38.132531522720576 40.0 37.0 41.0 34.0 41.0 26 38.20017983484478 40.0 37.0 41.0 34.0 41.0 27 38.19124253112851 40.0 37.0 41.0 34.0 41.0 28 38.14044951202435 40.0 37.0 41.0 34.0 41.0 29 38.087159829626195 40.0 37.0 41.0 34.0 41.0 30 37.957012338772806 40.0 37.0 41.0 34.0 41.0 31 37.93571749034655 40.0 37.0 41.0 33.0 41.0 32 37.78856828561828 40.0 37.0 41.0 33.0 41.0 33 37.738464195408014 40.0 37.0 41.0 33.0 41.0 34 37.70629290553415 40.0 37.0 41.0 33.0 41.0 35 37.66071284430019 40.0 37.0 41.0 33.0 41.0 36 37.57613790591897 40.0 37.0 41.0 33.0 41.0 37 37.47785384570621 40.0 36.0 41.0 33.0 41.0 38 37.31941521763208 40.0 36.0 41.0 32.0 41.0 39 37.23671183812611 40.0 36.0 41.0 32.0 41.0 40 37.25183448436394 40.0 36.0 41.0 32.0 41.0 41 37.196498664379 40.0 36.0 41.0 32.0 41.0 42 37.19662068175803 40.0 36.0 41.0 32.0 41.0 43 37.09754820155769 39.0 36.0 41.0 32.0 41.0 44 37.036045810955656 39.0 35.0 41.0 32.0 41.0 45 37.013864928638604 39.0 35.0 41.0 32.0 41.0 46 36.908802333723166 39.0 35.0 41.0 31.0 41.0 47 36.816268107848344 39.0 35.0 41.0 31.0 41.0 48 36.78520999190931 39.0 35.0 41.0 31.0 41.0 49 36.73936712401283 39.0 35.0 41.0 31.0 41.0 50 36.62178179162811 39.0 35.0 41.0 31.0 41.0 51 35.586522523469576 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 11.0 10 18.0 11 14.0 12 10.0 13 5.0 14 11.0 15 10.0 16 32.0 17 44.0 18 125.0 19 169.0 20 344.0 21 656.0 22 953.0 23 1437.0 24 1975.0 25 2811.0 26 3500.0 27 4188.0 28 4629.0 29 5551.0 30 6874.0 31 9227.0 32 12257.0 33 17614.0 34 28081.0 35 37813.0 36 41967.0 37 65847.0 38 112539.0 39 173878.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.82488816637915 20.011976475049323 24.130344595850282 12.03279076272125 2 32.06335142319194 25.308093882048617 24.796934923438787 17.831619771320657 3 31.886332364077337 24.87577692219609 26.926232047019866 16.311658666706712 4 27.598829384037497 25.853605425831265 27.6493258070511 18.89823938308013 5 23.716424102374457 36.627927713150285 22.13282624162069 17.52282194285457 6 23.951448346289077 35.58252035343742 24.34716009243286 16.118871207840648 7 80.485103555211 4.685842792808859 10.17925291574606 4.649800736234093 8 80.51119650241876 5.61035908776053 8.467067509400032 5.411376900420679 9 74.59673256230865 7.071564131395823 10.648925965485976 7.682777340809557 10 32.792639911696966 35.65610621894423 17.354437959794335 14.196815909564473 11 25.590798763306932 25.93225970554391 29.575698643354464 18.901242887794695 12 23.7502135304133 22.76318679358977 32.305133552714324 21.181466123282604 13 22.899283100968443 25.23300626418452 33.9713277931186 17.896382841728443 14 20.043700993596904 28.895967982639743 30.001633155688545 21.05869786807481 15 18.48488204673829 26.697027093489716 34.53974106034979 20.2783497994222 16 21.053066296735 27.241412323004404 30.396218587564366 21.30930279269623 17 21.27288529803214 25.567709320813726 29.64440381370011 23.51500156745402 18 22.10053856593913 24.523428275368822 31.759809727976336 21.616223430715717 19 20.66392471715433 27.45353484347047 29.0033432761854 22.879197163189797 20 22.610946648370316 27.05594590688009 29.856526334166176 20.47658111058341 21 21.621104125876883 28.348954686499813 29.87285789105162 20.157083296571688 22 21.34290450169041 24.825468218227144 28.770008503672724 25.061618776409723 23 19.13514081744135 28.162737394196853 29.613805609420492 23.0883161789413 24 20.402432087942618 26.101206845738123 30.003322627090483 23.493038439228776 25 19.33937913803169 29.070171256084443 28.45801945144741 23.13243015443646 26 20.028871189068745 27.058949411594657 29.020988866383462 23.89119053295314 27 22.36052944279356 25.75167398458076 28.128947966158012 23.758848606467673 28 19.012935719367537 26.468197578048887 30.430195734647867 24.08867096793571 29 20.539654709589254 23.85364672402109 29.69095813677585 25.915740429613805 30 23.50411386286373 24.524930027726104 29.387979598694226 22.58297651071594 31 23.706287273962808 25.60356365834383 27.178151004953904 23.51199806273946 32 23.600789170863752 25.00924516294952 28.52428427421247 22.86568139197426 33 22.36184347610618 24.00269564548132 29.92673325686911 23.70872762154339 34 21.173957361496196 23.25238262397435 31.689790524318063 23.88386949021139 35 22.25521905873917 22.974182999787878 30.479753562438173 24.290844379034787 36 23.842946738475458 23.92272733245606 30.771281238795517 21.463044690272962 37 22.690914961395578 23.932301003733734 32.522887644520196 20.853896390350492 38 22.23175417815664 25.473849798483606 30.948863455044105 21.345532568315654 39 21.349474668253517 23.034440813123812 33.547082752186455 22.069001766436212 40 22.899658539057764 22.514459059414953 32.91127834792223 21.67460405360505 41 21.43019385745742 23.76354158258418 29.947757789871055 24.858506770087345 42 24.249733908254196 22.82607267355095 29.80997201109044 23.114221407104417 43 23.548227838358883 23.52908049580354 29.925231504511828 22.997460161325748 44 22.168305141061477 23.716236383329797 29.60535825241078 24.510100223197945 45 21.880719564641993 22.147092889014868 29.88599822417784 26.086189322165303 46 24.431070505395983 23.19099849637045 29.72962825997586 22.648302738257705 47 21.335395739904 22.71531843720141 33.11345175902131 22.835834063873282 48 22.816123564183957 22.165864793480893 30.932907336247982 24.085104306087164 49 23.212210748417057 20.780685962933 33.30229711794951 22.704806170700436 50 21.933280897146858 21.064141720369957 32.796206573545504 24.20637080893768 51 21.353416768191384 20.36413740283193 29.8403824963254 28.442063332651284 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 121.0 1 258.5 2 396.0 3 1501.5 4 2607.0 5 1729.5 6 852.0 7 881.5 8 911.0 9 940.5 10 970.0 11 1028.0 12 1086.0 13 1052.0 14 1018.0 15 1032.5 16 1047.0 17 992.0 18 937.0 19 974.0 20 1011.0 21 1082.0 22 1153.0 23 1446.5 24 1740.0 25 2100.0 26 2938.0 27 3416.0 28 4117.0 29 4818.0 30 5859.0 31 6900.0 32 8358.5 33 9817.0 34 11331.0 35 12845.0 36 14741.0 37 16637.0 38 17954.5 39 19272.0 40 22167.5 41 25063.0 42 28664.5 43 32266.0 44 36644.5 45 41023.0 46 51705.5 47 62388.0 48 64044.5 49 65701.0 50 64733.0 51 63765.0 52 54950.0 53 46135.0 54 38863.0 55 31591.0 56 27182.0 57 22773.0 58 19344.0 59 15915.0 60 13939.5 61 11964.0 62 10170.5 63 8377.0 64 6969.5 65 5562.0 66 4545.5 67 3529.0 68 2839.0 69 2149.0 70 1784.0 71 1419.0 72 1292.0 73 1165.0 74 984.5 75 681.0 76 558.0 77 439.5 78 321.0 79 231.5 80 142.0 81 104.5 82 67.0 83 37.0 84 7.0 85 6.5 86 6.0 87 3.0 88 0.0 89 3.0 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 532711.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.26688062697749 #Duplication Level Percentage of deduplicated Percentage of total 1 72.35712704195531 29.13595797109459 2 11.117816064548588 8.953595446077411 3 4.20323718429856 5.077537498410693 4 2.270982515983002 3.6578152750816217 5 1.440874933853495 2.9009769479941374 6 1.0884629898304108 2.62974055670305 7 0.8896778978826595 2.507718759735092 8 0.7415709770926523 2.388860000881671 9 0.6545951215488336 2.372265325656783 >10 5.138801226719066 33.6345726331289 >50 0.06206181606822929 1.675111228754143 >100 0.030560742760130273 2.405700540616476 >500 9.403305464655468E-4 0.23400061920216925 >1k 0.003291156912629414 2.4261471966632677 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2457 0.46122569273020453 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 2207 0.4142959315651451 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC 2072 0.388953860536013 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG 1865 0.3500960182913437 No Hit CCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 1654 0.31048729986803353 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1404 0.26355753870297405 No Hit CTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCT 1156 0.217003215627235 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 641 0.12032790762721252 No Hit CGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 595 0.11169283157284156 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.631571339807138E-4 0.0 0.0 0.22601372977092646 0.0 2 7.508761786409517E-4 0.0 0.0 1.248331646990582 0.0 3 7.508761786409517E-4 0.0 0.0 1.6902222781207823 0.0 4 7.508761786409517E-4 0.0 0.0 2.325088087161707 0.0 5 7.508761786409517E-4 0.0 0.0 4.252399518688369 0.0 6 7.508761786409517E-4 0.0 0.0 5.447794395084765 0.0 7 7.508761786409517E-4 0.0 0.0 6.632113847846205 0.0 8 7.508761786409517E-4 0.0 0.0 8.547035822425293 0.0 9 7.508761786409517E-4 0.0 0.0 9.339773348025478 0.0 10 7.508761786409517E-4 0.0 0.0 11.233858508647279 0.0 11 7.508761786409517E-4 0.0 0.0 13.082140222371981 0.0 12 7.508761786409517E-4 0.0 0.0 14.971907844966596 0.0 13 7.508761786409517E-4 0.0 0.0 15.643378867716267 0.0 14 7.508761786409517E-4 0.0 0.0 15.915571482473611 0.0 15 7.508761786409517E-4 0.0 0.0 16.411149760376638 0.0 16 7.508761786409517E-4 0.0 0.0 17.362509878714725 0.0 17 7.508761786409517E-4 0.0 0.0 18.553399498039276 0.0 18 7.508761786409517E-4 0.0 0.0 19.825196025612385 0.0 19 7.508761786409517E-4 0.0 0.0 20.647780879313547 0.0 20 7.508761786409517E-4 0.0 0.0 21.394902677061296 0.0 21 7.508761786409517E-4 0.0 0.0 22.25090152071198 0.0 22 7.508761786409517E-4 0.0 0.0 23.184803767896664 0.0 23 7.508761786409517E-4 0.0 0.0 24.132221786296885 0.0 24 7.508761786409517E-4 0.0 0.0 24.84536643696113 0.0 25 9.385952233011896E-4 0.0 0.0 25.505386597986526 0.0 26 9.385952233011896E-4 0.0 0.0 26.14025240702745 0.0 27 9.385952233011896E-4 0.0 0.0 26.758598940138274 0.0 28 9.385952233011896E-4 0.0 0.0 27.424438391548136 0.0 29 9.385952233011896E-4 0.0 0.0 28.068502433777414 0.0 30 9.385952233011896E-4 0.0 0.0 28.859550487975657 0.0 31 0.0011263142679614276 0.0 0.0 29.54754078665543 0.0 32 0.0011263142679614276 0.0 0.0 30.159692591292465 0.0 33 0.0011263142679614276 0.0 0.0 30.79455840033339 0.0 34 0.0011263142679614276 0.0 0.0 31.391880400442265 0.0 35 0.0011263142679614276 0.0 0.0 32.06391458032592 0.0 36 0.0011263142679614276 0.0 0.0 32.660861142345475 0.0 37 0.0011263142679614276 0.0 0.0 33.24466737123881 0.0 38 0.0011263142679614276 0.0 0.0 33.83354201433798 0.0 39 0.0011263142679614276 0.0 0.0 34.45752011878861 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 20 7.029873E-4 45.000004 1 TCTAGCG 20 7.029873E-4 45.000004 1 TGCGCCC 20 7.029873E-4 45.000004 17 TCGCTAG 20 7.029873E-4 45.000004 1 ACGGAGT 20 7.029873E-4 45.000004 5 CTCGCGC 35 1.2102828E-7 45.000004 33 TCGTAAG 20 7.029873E-4 45.000004 1 GTAACGG 80 0.0 45.000004 2 GCGTAAG 40 6.8030204E-9 45.000004 1 TCGCGCA 35 1.2102828E-7 45.000004 34 ACGGTTT 20 7.029873E-4 45.000004 17 ACCGAAC 45 3.8380676E-10 45.0 39 CGTTTTT 1010 0.0 42.549503 1 CGTAAGG 75 0.0 42.000004 2 CGAACGG 70 0.0 41.785717 2 TCGAACG 50 1.0786607E-9 40.5 1 TTTACGG 45 1.9250365E-8 40.0 2 CGTTAGG 90 0.0 40.0 2 CGGGCTC 45 1.9250365E-8 40.0 6 TCTCGCG 40 3.4535697E-7 39.375004 32 >>END_MODULE