##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936402.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 191510 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.92530938332202 33.0 31.0 34.0 30.0 34.0 2 32.01979531094982 33.0 31.0 34.0 30.0 34.0 3 31.981045376220564 33.0 31.0 34.0 30.0 34.0 4 35.65176753172158 37.0 35.0 37.0 33.0 37.0 5 32.27601169651715 37.0 35.0 37.0 16.0 37.0 6 33.93631664142865 37.0 35.0 37.0 19.0 37.0 7 35.47640332097541 37.0 35.0 37.0 32.0 37.0 8 35.648890397368284 37.0 35.0 37.0 33.0 37.0 9 37.54498981776408 39.0 37.0 39.0 35.0 39.0 10 37.27569317529111 39.0 37.0 39.0 34.0 39.0 11 37.219737872695944 39.0 37.0 39.0 34.0 39.0 12 36.98934259307608 39.0 35.0 39.0 33.0 39.0 13 36.769186987624664 39.0 35.0 39.0 33.0 39.0 14 37.907952587332254 40.0 36.0 41.0 33.0 41.0 15 38.04772596731241 40.0 36.0 41.0 33.0 41.0 16 38.055798652811866 40.0 36.0 41.0 34.0 41.0 17 38.01467286303587 40.0 36.0 41.0 34.0 41.0 18 37.973896924442585 40.0 36.0 41.0 34.0 41.0 19 37.84338676831497 40.0 36.0 41.0 34.0 41.0 20 37.85126103075557 40.0 36.0 41.0 34.0 41.0 21 37.855031068873686 40.0 35.0 41.0 34.0 41.0 22 37.912474544410216 40.0 35.0 41.0 34.0 41.0 23 37.9042138791708 40.0 35.0 41.0 34.0 41.0 24 37.8870816145371 40.0 35.0 41.0 34.0 41.0 25 37.68250221920526 40.0 35.0 41.0 33.0 41.0 26 37.686658660122184 40.0 35.0 41.0 33.0 41.0 27 37.63394078638191 40.0 35.0 41.0 33.0 41.0 28 37.58381807738499 40.0 35.0 41.0 33.0 41.0 29 37.57388125946426 40.0 35.0 41.0 33.0 41.0 30 37.4236332306407 39.0 35.0 41.0 33.0 41.0 31 37.40356639339982 39.0 35.0 41.0 33.0 41.0 32 37.305947470106 39.0 35.0 41.0 33.0 41.0 33 37.18908151010391 39.0 35.0 41.0 33.0 41.0 34 37.069651715315125 39.0 35.0 41.0 32.0 41.0 35 37.04516735418516 39.0 35.0 41.0 32.0 41.0 36 36.93944963709467 39.0 35.0 41.0 32.0 41.0 37 36.852065166309856 39.0 35.0 41.0 32.0 41.0 38 36.73647329121195 39.0 35.0 41.0 31.0 41.0 39 36.666315074930814 39.0 35.0 41.0 31.0 41.0 40 36.585196595478045 39.0 35.0 41.0 31.0 41.0 41 36.464826901989454 39.0 35.0 41.0 31.0 41.0 42 36.509378100360294 39.0 35.0 41.0 31.0 41.0 43 36.39617252362801 39.0 35.0 41.0 31.0 41.0 44 36.3512401441178 39.0 35.0 41.0 31.0 41.0 45 36.33827998537935 39.0 35.0 41.0 31.0 41.0 46 36.24260874105791 38.0 35.0 40.0 31.0 41.0 47 36.11816615320349 38.0 35.0 40.0 31.0 41.0 48 36.10213565871234 38.0 35.0 40.0 31.0 41.0 49 36.10055871756044 38.0 35.0 40.0 31.0 41.0 50 35.9484100046995 38.0 35.0 40.0 30.0 41.0 51 34.84273406088455 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 9.0 10 16.0 11 10.0 12 4.0 13 3.0 14 5.0 15 9.0 16 8.0 17 22.0 18 44.0 19 96.0 20 230.0 21 360.0 22 550.0 23 710.0 24 957.0 25 1185.0 26 1520.0 27 1746.0 28 1952.0 29 2323.0 30 2916.0 31 3719.0 32 5130.0 33 7872.0 34 13975.0 35 19605.0 36 14435.0 37 21261.0 38 34911.0 39 55887.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.71609837606391 18.97185525560023 22.75546968826693 11.556576680068927 2 32.2949193253616 27.7698292517362 23.511565975667068 16.42368544723513 3 29.94778340556629 27.938488851757086 26.064957443475535 16.048770299201088 4 26.92653125163177 24.357996971437522 30.6542739282544 18.061197848676308 5 24.705759490366038 34.12563312620751 22.859380711190017 18.309226672236438 6 23.170591614014935 36.25711451099159 24.91514803404522 15.657145840948253 7 75.39031904339198 5.336535951125267 14.376794945433657 4.896350060049084 8 73.73400866795467 8.58127512923607 10.810401545611196 6.874314657198058 9 68.30609367657041 6.376168346300454 13.645240457417367 11.672497519711765 10 42.0641219779646 22.240091901206203 19.572346091587907 16.123440029241294 11 34.24416479557203 20.8526969871025 25.91300715367344 18.99013106365203 12 30.19946739073678 18.237167771917914 30.863140305989244 20.700224531356064 13 24.387238264320402 23.591457365150646 33.704767375071796 18.316536995457156 14 18.826170957130177 30.43966372513185 29.53057281604094 21.203592501697038 15 16.885802307973474 22.412928828781787 41.24171061563365 19.459558247611092 16 18.253354916192364 21.74716724975197 35.57098846013263 24.428489373923032 17 19.182810297112425 22.414495326614798 30.946686857083183 27.456007519189598 18 22.3596679024594 21.804083337684716 32.382643204010236 23.453605555845648 19 22.486032060988983 25.727116077489427 27.827267505613285 23.95958435590831 20 25.34697927001201 24.861887107722836 28.8334812803509 20.957652341914258 21 22.242180564983553 29.391676674847268 28.390684559553026 19.975458200616156 22 19.643360660017752 24.164273406088455 28.767688371364418 27.42467756252937 23 19.756670669938906 27.567751031277737 28.31079317006945 24.364785128713905 24 22.99775468643935 22.735105216437784 29.61098637146885 24.65615372565401 25 19.082032269855357 26.920787426244058 28.06119784867631 25.93598245522427 26 17.67636154769986 25.665500496057646 31.08976032583155 25.568377630410943 27 20.627643465093207 26.894156963082867 27.739543626964647 24.738655944859275 28 19.06218996397055 25.43522531460498 32.26045637303535 23.24212834838912 29 21.894418046055037 22.51527335387186 32.25210171792596 23.338206882147148 30 21.020312255234714 28.766121873531407 29.305519294031647 20.908046577202235 31 25.700485614328233 25.34906793378936 25.416949506553184 23.533496945329226 32 28.40217221032844 26.36781369119106 24.021199937340086 21.20881416114041 33 25.68482063599812 26.5808573964806 24.418568220980628 23.31575374654065 34 23.197744243120464 22.90219831862566 31.421335700485614 22.47872173776826 35 21.378518093049973 25.134457730666803 27.443997702469847 26.04302647381338 36 26.49261135188763 26.434650932066212 27.42519972847371 19.64753798757245 37 24.6404887473239 26.04041564409169 28.606861260508587 20.71223434807582 38 24.388804762153413 27.002767479504985 23.491201503837917 25.117226254503684 39 25.745914051485563 24.15435225314605 28.477364106312987 21.622369589055403 40 23.562738238212102 23.219675212782622 29.1332045324004 24.084382016604877 41 20.418254921414025 24.254608114458776 27.956242493864554 27.37089447026265 42 23.730875672288654 22.04375750613545 28.44760064748577 25.77776617409013 43 26.77458096182967 22.72152890188502 26.53542895932327 23.968461176962037 44 23.247872173776827 23.060414599759802 28.83243694846222 24.85927627800115 45 22.373766382956504 22.90794214401337 27.44295337058117 27.27533810244896 46 25.77567751031278 25.472821262597257 27.209023027518146 21.542478199571825 47 20.022453135606497 23.655161610359773 32.09858493029085 24.223800323742886 48 21.78163020207822 22.45052477677406 29.44545976711399 26.32238525403373 49 23.275546968826692 19.00631820792648 33.10062137747376 24.617513445773067 50 22.436426296276956 20.78220458461699 30.665239413085477 26.116129706020573 51 19.99477834055663 21.763354394026422 27.45078585974623 30.791081405670724 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 137.0 1 187.5 2 238.0 3 692.0 4 1146.0 5 798.0 6 450.0 7 428.0 8 406.0 9 410.0 10 414.0 11 429.5 12 445.0 13 453.0 14 461.0 15 446.0 16 431.0 17 441.5 18 452.0 19 441.5 20 431.0 21 452.0 22 473.0 23 484.5 24 496.0 25 555.5 26 809.0 27 1003.0 28 1300.0 29 1597.0 30 1777.0 31 1957.0 32 2299.0 33 2641.0 34 2942.0 35 3243.0 36 3483.0 37 3723.0 38 4361.0 39 4999.0 40 6093.0 41 7187.0 42 8824.0 43 10461.0 44 12317.0 45 14173.0 46 19587.5 47 25002.0 48 23308.0 49 21614.0 50 21672.0 51 21730.0 52 18406.0 53 15082.0 54 13042.0 55 11002.0 56 9774.5 57 8547.0 58 8387.5 59 8228.0 60 7348.5 61 6469.0 62 6170.5 63 5872.0 64 4882.0 65 3892.0 66 3285.5 67 2679.0 68 2086.0 69 1493.0 70 1210.5 71 928.0 72 794.0 73 660.0 74 507.5 75 289.5 76 224.0 77 155.5 78 87.0 79 65.0 80 43.0 81 27.5 82 12.0 83 8.0 84 4.0 85 3.5 86 3.0 87 3.0 88 3.0 89 1.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 191510.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.19215706751606 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24128254430182 29.839172889144173 2 10.95723120095619 8.807895149078378 3 3.807878189471496 4.591405148556211 4 1.9227771137556513 3.0912223904756932 5 1.1666580055084965 2.3445250900736254 6 0.8678480486410644 2.092841104903138 7 0.7210414176583693 2.028614693749674 8 0.6534843839318193 2.1011957600125317 9 0.5573455282440367 2.0160827110855832 >10 5.005716364392247 33.97316067046107 >50 0.059761991373486464 1.6724975197117644 >100 0.029880995686743232 2.4855098950446455 >500 0.0038975211765317256 1.0380658973421755 >1k 0.005196694902042301 3.9178110803613384 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC 2026 1.0579082032269855 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 2024 1.0568638713383114 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG 2007 1.0479870502845803 No Hit GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 1446 0.7550519555114615 No Hit CCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 854 0.44592971646389223 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 601 0.3138217325466033 No Hit CTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGCT 533 0.2783144483316798 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCT 472 0.2464623257271161 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGGATCGT 358 0.1869354080726855 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTA 344 0.17962508485196596 No Hit GAACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCT 344 0.17962508485196596 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTC 323 0.16865960002088665 No Hit TCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 299 0.15612761735679598 No Hit GGGACAGTTCAATGGTCTGAAAGTTTCAAAAAGGCTGGGGAATTTGAGGGG 239 0.12479766069656936 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCC 212 0.1106991801994674 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTT 210 0.10965484831079317 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 209 0.10913268236645607 No Hit ACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 197 0.10286669103441073 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2913685969401076 0.0 2 0.0 0.0 0.0 1.8098271630724245 0.0 3 0.0 0.0 0.0 2.3314709414651977 0.0 4 0.0 0.0 0.0 3.126729674690617 0.0 5 0.0 0.0 0.0 5.878022035402851 0.0 6 0.0 0.0 0.0 7.079003707378205 0.0 7 0.0 0.0 0.0 8.440812490209389 0.0 8 0.0 0.0 0.0 10.508067463840009 0.0 9 0.0 0.0 0.0 11.305414860842776 0.0 10 0.0 0.0 0.0 13.994047308234556 0.0 11 0.0 0.0 0.0 16.205942248446558 0.0 12 0.0 0.0 0.0 19.03660383269803 0.0 13 0.0 0.0 0.0 19.815675421649 0.0 14 0.0 0.0 0.0 20.163437940577516 0.0 15 0.0 0.0 0.0 20.85478565087985 0.0 16 0.0 0.0 0.0 22.03070335752702 0.0 17 0.0 0.0 0.0 23.247872173776827 0.0 18 0.0 0.0 0.0 24.641533079212575 0.0 19 0.0 0.0 0.0 25.648269019894524 0.0 20 0.0 0.0 0.0 26.479557203279203 0.0 21 0.0 0.0 0.0 27.371416636206988 0.0 22 0.0 0.0 0.0 28.27998537935356 0.0 23 0.0 0.0 0.0 29.213095921883976 0.0 24 0.0 0.0 0.0 29.877813169025117 0.0 25 0.0 0.0 0.0 30.452195707795937 0.0 26 0.0 0.0 0.0 31.010913268236646 0.0 27 0.0 0.0 0.0 31.576941151898072 0.0 28 0.0 0.0 0.0 32.13461438045011 0.0 29 0.0 0.0 0.0 32.65834682262023 0.0 30 0.0 0.0 0.0 33.31940890815101 0.0 31 0.0 0.0 0.0 33.94496370946687 0.0 32 0.0 0.0 0.0 34.50315910396324 0.0 33 0.0 0.0 0.0 35.12505874366874 0.0 34 0.0 0.0 0.0 35.660801002558614 0.0 35 0.0 0.0 0.0 36.31037543731398 0.0 36 0.0 0.0 0.0 36.88371364419613 0.0 37 0.0 0.0 0.0 37.4560075191896 0.0 38 0.0 0.0 0.0 38.00428176074357 0.0 39 5.221659443371104E-4 0.0 0.0 38.58127512923607 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTG 20 7.018553E-4 45.0 42 CAAACGG 20 7.018553E-4 45.0 2 CGTATGG 25 3.878598E-5 45.0 2 CTCGTCC 25 3.878598E-5 45.0 37 GATCGGA 20 7.018553E-4 45.0 34 CCTAGTA 20 7.018553E-4 45.0 37 GGCGTAG 35 1.204844E-7 45.0 1 GGCCGAT 25 3.878598E-5 45.0 8 CCCAGTG 20 7.018553E-4 45.0 31 GCAAACG 20 7.018553E-4 45.0 1 GTGATCG 20 7.018553E-4 45.0 19 TGTATCC 20 7.018553E-4 45.0 21 TTGTAGT 20 7.018553E-4 45.0 42 TATGCGG 55 1.8189894E-12 45.0 2 GCGCAAG 25 3.878598E-5 45.0 1 ACGATGG 45 3.8198777E-10 45.0 2 GTAGCGG 25 3.878598E-5 45.0 2 TCGTCCC 25 3.878598E-5 45.0 38 GTCAAGC 20 7.018553E-4 45.0 16 ATCCAAT 20 7.018553E-4 45.0 24 >>END_MODULE