##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936398.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 246720 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79721141374838 33.0 31.0 34.0 30.0 34.0 2 31.891885538262 33.0 31.0 34.0 30.0 34.0 3 31.86801637483787 33.0 31.0 34.0 30.0 34.0 4 35.54969195849546 37.0 35.0 37.0 33.0 37.0 5 31.816755836575876 37.0 35.0 37.0 0.0 37.0 6 33.63066228923476 37.0 35.0 37.0 17.0 37.0 7 35.286616407263296 37.0 35.0 37.0 32.0 37.0 8 35.47807230869001 37.0 35.0 37.0 33.0 37.0 9 37.40407344357977 39.0 37.0 39.0 34.0 39.0 10 37.04896238651102 39.0 37.0 39.0 33.0 39.0 11 37.03578955901427 39.0 37.0 39.0 33.0 39.0 12 36.864992704280155 39.0 35.0 39.0 33.0 39.0 13 36.6102140077821 39.0 35.0 39.0 32.0 39.0 14 37.729069390402074 40.0 36.0 41.0 33.0 41.0 15 37.85323443579767 40.0 36.0 41.0 33.0 41.0 16 37.940847924773024 40.0 36.0 41.0 33.0 41.0 17 37.89207603761349 40.0 36.0 41.0 33.0 41.0 18 37.858029345006486 40.0 36.0 41.0 33.0 41.0 19 37.741776102464335 39.0 36.0 41.0 33.0 41.0 20 37.70585278858625 40.0 36.0 41.0 33.0 41.0 21 37.74371757457847 39.0 35.0 41.0 33.0 41.0 22 37.822920719844355 40.0 36.0 41.0 33.0 41.0 23 37.811352950713356 40.0 36.0 41.0 34.0 41.0 24 37.764283398184176 40.0 35.0 41.0 33.0 41.0 25 37.56838521400778 39.0 35.0 41.0 33.0 41.0 26 37.58116083009079 39.0 35.0 41.0 33.0 41.0 27 37.50940337224384 39.0 35.0 41.0 33.0 41.0 28 37.429738164721144 39.0 35.0 41.0 33.0 41.0 29 37.393851329442285 39.0 35.0 41.0 33.0 41.0 30 37.25188067444877 39.0 35.0 41.0 32.0 41.0 31 37.25057960440986 39.0 35.0 41.0 33.0 41.0 32 37.116816634241246 39.0 35.0 41.0 32.0 41.0 33 37.04268806744488 39.0 35.0 41.0 32.0 41.0 34 36.97069552529183 39.0 35.0 41.0 32.0 41.0 35 36.96235813878081 39.0 35.0 41.0 32.0 41.0 36 36.88654345006485 39.0 35.0 41.0 32.0 41.0 37 36.78622730220493 39.0 35.0 41.0 31.0 41.0 38 36.64647778858625 39.0 35.0 41.0 31.0 41.0 39 36.64289477950713 39.0 35.0 41.0 31.0 41.0 40 36.54459306095979 39.0 35.0 41.0 31.0 41.0 41 36.52280317769131 39.0 35.0 41.0 30.0 41.0 42 36.52699011024643 39.0 35.0 41.0 31.0 41.0 43 36.47732247081712 39.0 35.0 41.0 31.0 41.0 44 36.47698605706874 39.0 35.0 41.0 31.0 41.0 45 36.49115596627756 39.0 35.0 41.0 31.0 41.0 46 36.36566553177691 39.0 35.0 41.0 31.0 41.0 47 36.21214737354086 38.0 35.0 40.0 30.0 41.0 48 36.228741083009076 38.0 35.0 40.0 30.0 41.0 49 36.26804069390402 39.0 35.0 40.0 31.0 41.0 50 36.11119082360571 38.0 35.0 40.0 30.0 41.0 51 35.154839494163426 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 10.0 10 10.0 11 8.0 12 4.0 13 6.0 14 7.0 15 8.0 16 11.0 17 27.0 18 55.0 19 131.0 20 253.0 21 528.0 22 839.0 23 1192.0 24 1398.0 25 1779.0 26 2050.0 27 2198.0 28 2552.0 29 2968.0 30 3894.0 31 5343.0 32 7046.0 33 10667.0 34 17311.0 35 24387.0 36 18714.0 37 27909.0 38 45227.0 39 70145.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.41569390402075 18.15296692607004 21.970654993514916 12.460684176394293 2 29.935959792477302 29.377026588845656 23.353599221789885 17.333414396887157 3 28.712710765239947 29.930285343709468 24.94690337224384 16.410100518806743 4 26.976329442282747 24.010619325551232 32.02294098573281 16.990110246433204 5 25.498540856031127 34.70817120622568 22.09914072632944 17.69414721141375 6 22.758592736705577 37.49635214007782 25.03688391699092 14.708171206225682 7 73.16715304798961 5.096870946822309 16.198929961089494 5.537046044098573 8 71.00599870298313 10.282911802853437 11.311608300907912 7.399481193255513 9 66.58033398184176 6.040045395590143 12.88221465629053 14.497405966277563 10 41.190823605706875 21.99700064850843 21.009241245136188 15.802934500648508 11 32.396643968871594 21.718142023346303 24.777480544747082 21.107733463035018 12 27.133187418936444 17.895184824902724 32.23411154345007 22.737516212710766 13 23.228761348897535 25.250081063553825 34.49578469520104 17.0253728923476 14 17.919098573281453 31.873378728923473 28.69811932555123 21.509403372243842 15 14.049124513618677 23.536397535667962 42.51094357976653 19.903534370946822 16 15.582036316472115 23.861867704280158 33.94576848249027 26.610327496757456 17 16.803258754863815 24.156939040207522 30.772130350194555 28.26767185473411 18 18.69649805447471 23.41642347600519 33.418855382619974 24.468223086900128 19 20.4628728923476 26.143401426718547 27.83276588845655 25.5609597924773 20 22.75575551232166 25.596222438391695 31.29134241245136 20.356679636835278 21 20.16536964980545 30.61243514915694 29.149643320363168 20.07255188067445 22 17.440823605706875 23.775940337224384 29.02075226977951 29.762483787289234 23 17.984354734111545 28.834306095979244 28.21862840466926 24.962710765239947 24 20.74578469520104 23.683122568093385 29.289477950713362 26.28161478599222 25 16.93985084306096 30.175907911802852 27.44285019455253 25.441391050583658 26 17.266536964980546 25.42679961089494 29.157344357976655 28.14931906614786 27 20.906290531776914 26.661397535667962 28.45776588845655 23.974546044098574 28 17.351248378728922 24.477950713359274 33.702172503242544 24.46862840466926 29 19.006971465629054 22.262483787289234 30.995460440985735 27.73508430609598 30 19.90393968871595 27.737516212710766 30.569876783398186 21.788667315175097 31 24.790450713359274 24.482409208819714 22.775210765239947 27.951929312581065 32 22.469601167315176 32.078874837872895 22.17169260700389 23.27983138780804 33 20.701199740596625 27.03347924773022 24.698038261997407 27.567282749675748 34 20.216439688715955 24.514834630350194 25.271968223086898 29.99675745784695 35 17.78250648508431 27.60051880674449 25.929798962386513 28.687175745784693 36 22.009565499351492 25.00445849546044 25.107814526588847 27.87816147859922 37 18.419260700389106 27.435959792477306 30.90021076523995 23.244568741893644 38 19.87475680933852 30.780236705577174 22.449740596627755 26.89526588845655 39 19.766131647211413 27.542963683527887 25.563391699092087 27.12751297016861 40 19.965547989623865 27.46635862516213 27.255998702983135 25.312094682230867 41 16.763537613488975 24.672503242542156 24.385943579766536 34.17801556420233 42 20.044990272373543 24.30650129701686 28.36089494163424 27.287613488975353 43 21.93214980544747 23.407506485084305 25.878323605706875 28.782020103761347 44 20.65337224383917 23.297260051880674 28.564364461738002 27.485003242542156 45 19.577658884565498 24.22786964980545 26.244325551232166 29.950145914396884 46 24.925826848249027 25.89250972762646 25.64283398184176 23.53882944228275 47 17.099546044098574 23.699740596627755 32.5863326848249 26.614380674448768 48 19.771806095979247 23.994406614785994 27.138456549935146 29.095330739299612 49 20.021887159533076 19.581306744487676 34.11113813229572 26.28566796368353 50 20.727545395590145 21.17217898832685 30.221708819714653 27.878566796368354 51 18.650697146562905 21.766780155642024 26.15637159533074 33.42615110246433 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 124.0 1 197.0 2 270.0 3 622.0 4 974.0 5 689.0 6 404.0 7 417.0 8 430.0 9 465.0 10 500.0 11 480.5 12 461.0 13 459.5 14 458.0 15 451.0 16 444.0 17 483.0 18 522.0 19 595.0 20 668.0 21 630.0 22 592.0 23 626.0 24 660.0 25 860.5 26 1111.0 27 1161.0 28 1361.5 29 1562.0 30 1821.0 31 2080.0 32 2396.5 33 2713.0 34 3233.0 35 3753.0 36 4324.5 37 4896.0 38 5689.5 39 6483.0 40 7996.0 41 9509.0 42 11522.5 43 13536.0 44 16878.0 45 20220.0 46 29879.0 47 39538.0 48 35944.0 49 32350.0 50 31651.5 51 30953.0 52 25585.5 53 20218.0 54 16703.0 55 13188.0 56 11446.5 57 9705.0 58 8884.5 59 8064.0 60 6923.0 61 5782.0 62 5126.5 63 4471.0 64 3828.0 65 3185.0 66 2608.5 67 2032.0 68 1697.0 69 1362.0 70 1092.0 71 822.0 72 763.5 73 705.0 74 540.0 75 276.5 76 178.0 77 150.5 78 123.0 79 104.5 80 86.0 81 65.5 82 45.0 83 45.5 84 46.0 85 26.0 86 6.0 87 3.5 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 246720.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.925178339818416 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43885261144182 27.85181582360571 2 11.417242890273489 8.660019455252918 3 4.425611046393571 5.035262645914397 4 2.205858778014086 3.3463035019455254 5 1.2482766728296764 2.3670557717250325 6 0.8603276726266177 1.9576848249027237 7 0.6102448460494394 1.620055123216602 8 0.5268839038570468 1.5985732814526588 9 0.41252979084953356 1.4080739299610896 >10 4.736611484572882 33.88780804150454 >50 0.07267364191131678 1.888780804150454 >100 0.030993170815120392 2.2985570687418937 >500 0.008549840224860798 2.1494001297016863 >1k 0.005343650140537999 5.930609597924772 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGC 4077 1.6524805447470818 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC 3883 1.573848897535668 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCG 3527 1.4295557717250325 No Hit GCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 2106 0.8535992217898832 TruSeq Adapter, Index 19 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 1039 0.42112516212710766 TruSeq Adapter, Index 19 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCT 897 0.3635700389105058 No Hit CTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGCT 759 0.30763618677042803 TruSeq Adapter, Index 13 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCT 684 0.2772373540856031 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGAACACT 663 0.26872568093385213 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTA 661 0.26791504539559013 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTC 632 0.25616083009079116 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 505 0.20468547341115437 No Hit TCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 502 0.20346952010376138 TruSeq Adapter, Index 19 (95% over 23bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGC 443 0.17955577172503243 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCG 413 0.16739623865110245 No Hit GAATATGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC 387 0.1568579766536965 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTT 362 0.14672503242542154 No Hit ACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 319 0.12929636835278857 TruSeq Adapter, Index 13 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.053177691309987E-4 0.0 0.0 0.323443579766537 0.0 2 4.053177691309987E-4 0.0 0.0 2.0363164721141374 0.0 3 4.053177691309987E-4 0.0 0.0 2.6272697795071336 0.0 4 4.053177691309987E-4 0.0 0.0 3.6340791180285343 0.0 5 4.053177691309987E-4 0.0 0.0 7.059014267185473 0.0 6 4.053177691309987E-4 0.0 0.0 8.390483138780803 0.0 7 4.053177691309987E-4 0.0 0.0 10.055528534370946 0.0 8 4.053177691309987E-4 0.0 0.0 12.506485084306096 0.0 9 4.053177691309987E-4 0.0 0.0 13.355220492866406 0.0 10 4.053177691309987E-4 0.0 0.0 16.6605869001297 0.0 11 4.053177691309987E-4 0.0 0.0 18.812418936446175 0.0 12 4.053177691309987E-4 0.0 0.0 22.476086251621272 0.0 13 4.053177691309987E-4 0.0 0.0 23.398994811932557 0.0 14 4.053177691309987E-4 0.0 0.0 23.838764591439688 0.0 15 4.053177691309987E-4 0.0 0.0 24.61413748378729 0.0 16 4.053177691309987E-4 0.0 0.0 25.732409208819714 0.0 17 4.053177691309987E-4 0.0 0.0 27.055771725032425 0.0 18 4.053177691309987E-4 0.0 0.0 28.642185473411153 0.0 19 8.106355382619975E-4 0.0 0.0 29.783154993514916 0.0 20 8.106355382619975E-4 0.0 0.0 30.605544747081712 0.0 21 8.106355382619975E-4 0.0 0.0 31.52561608300908 0.0 22 8.106355382619975E-4 0.0 0.0 32.458657587548636 0.0 23 8.106355382619975E-4 0.0 0.0 33.448038261997404 0.0 24 8.106355382619975E-4 0.0 0.0 34.170719844357976 0.0 25 8.106355382619975E-4 0.0 0.0 34.757619974059665 0.0 26 8.106355382619975E-4 0.0 0.0 35.322632944228275 0.0 27 0.0012159533073929961 0.0 0.0 35.920881971465626 0.0 28 0.0012159533073929961 0.0 0.0 36.49359597924773 0.0 29 0.001621271076523995 0.0 0.0 37.083333333333336 0.0 30 0.0020265888456549937 0.0 0.0 37.773589494163424 0.0 31 0.0020265888456549937 0.0 0.0 38.37264915693904 0.0 32 0.0020265888456549937 0.0 0.0 38.929555771725035 0.0 33 0.0020265888456549937 0.0 0.0 39.48078793774319 0.0 34 0.0020265888456549937 0.0 0.0 40.029588197146566 0.0 35 0.0020265888456549937 0.0 0.0 40.70322632944228 0.0 36 0.0020265888456549937 0.0 0.0 41.23013942931258 0.0 37 0.0020265888456549937 0.0 0.0 41.7534046692607 0.0 38 0.0020265888456549937 0.0 0.0 42.24140726329442 0.0 39 0.0020265888456549937 0.0 0.0 42.76386186770428 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAATAC 170 0.0 45.000004 3 GCCGATG 35 1.206754E-7 45.000004 9 CGGGCCC 35 1.206754E-7 45.000004 6 CTCGAAT 35 1.206754E-7 45.000004 43 ACAGTCG 20 7.022507E-4 45.0 1 CTGTATG 20 7.022507E-4 45.0 22 CACGGGC 20 7.022507E-4 45.0 4 ATTACGG 40 6.7775545E-9 45.0 2 CGATTGT 20 7.022507E-4 45.0 10 CGCGAGG 20 7.022507E-4 45.0 2 CGTTATT 50 2.1827873E-11 45.0 1 GTTACTT 20 7.022507E-4 45.0 12 ACTACGG 20 7.022507E-4 45.0 2 GAGCATG 45 3.8198777E-10 45.0 1 GGCGAAC 25 3.8818733E-5 45.0 32 ATGTTAC 20 7.022507E-4 45.0 10 GTTGGCC 20 7.022507E-4 45.0 18 TCGAAGG 20 7.022507E-4 45.0 2 TGGTACG 20 7.022507E-4 45.0 1 AGAGACG 20 7.022507E-4 45.0 1 >>END_MODULE