##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936396.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 310748 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.957663444334315 33.0 31.0 34.0 30.0 34.0 2 32.08436096129339 33.0 31.0 34.0 30.0 34.0 3 31.614121410274564 33.0 31.0 34.0 28.0 34.0 4 35.55602610475369 37.0 35.0 37.0 33.0 37.0 5 35.756439301298805 37.0 35.0 37.0 35.0 37.0 6 35.77733726363484 37.0 35.0 37.0 35.0 37.0 7 26.986896134488397 35.0 11.0 37.0 0.0 37.0 8 31.285842547659197 37.0 22.0 37.0 17.0 37.0 9 36.079601477724715 39.0 32.0 39.0 32.0 39.0 10 36.77258421614942 38.0 35.0 39.0 33.0 39.0 11 37.21347200947392 39.0 37.0 39.0 34.0 39.0 12 37.268297784700145 39.0 37.0 39.0 34.0 39.0 13 37.255132776397595 39.0 37.0 39.0 34.0 39.0 14 38.4028505412746 40.0 38.0 41.0 34.0 41.0 15 38.486873608196994 40.0 38.0 41.0 34.0 41.0 16 38.43201565255448 40.0 38.0 41.0 34.0 41.0 17 38.34891294553786 40.0 38.0 41.0 34.0 41.0 18 38.18379844761672 40.0 37.0 41.0 34.0 41.0 19 38.008476321649695 40.0 37.0 41.0 34.0 41.0 20 37.97980678878062 40.0 36.0 41.0 34.0 41.0 21 37.912523974410135 40.0 36.0 41.0 33.0 41.0 22 37.926113764207656 40.0 36.0 41.0 33.0 41.0 23 37.85429672918249 40.0 36.0 41.0 33.0 41.0 24 37.80874534992984 40.0 36.0 41.0 33.0 41.0 25 37.71833447037471 40.0 35.0 41.0 33.0 41.0 26 37.61182051051012 40.0 35.0 41.0 33.0 41.0 27 37.50148029914915 39.0 35.0 41.0 33.0 41.0 28 37.45329977988595 39.0 35.0 41.0 33.0 41.0 29 37.40993345089912 39.0 35.0 41.0 33.0 41.0 30 37.28599057757411 39.0 35.0 41.0 33.0 41.0 31 37.06952900742724 39.0 35.0 41.0 32.0 41.0 32 36.848250028962376 39.0 35.0 41.0 31.0 41.0 33 36.64288426635087 39.0 35.0 41.0 30.0 41.0 34 36.319976315213616 39.0 35.0 41.0 30.0 41.0 35 36.08505284024354 39.0 35.0 41.0 29.0 41.0 36 35.83773990500341 39.0 35.0 41.0 27.0 41.0 37 35.725999845534005 39.0 35.0 41.0 26.0 41.0 38 35.52477570249849 39.0 35.0 41.0 25.0 41.0 39 35.45958139714495 39.0 35.0 41.0 24.0 41.0 40 35.316877341125284 39.0 35.0 40.0 24.0 41.0 41 35.191611852690926 39.0 35.0 40.0 23.0 41.0 42 35.09450744654833 39.0 34.0 40.0 23.0 41.0 43 35.04785227901708 38.0 34.0 40.0 23.0 41.0 44 34.805701082549206 38.0 34.0 40.0 22.0 41.0 45 34.72264342811538 38.0 34.0 40.0 22.0 41.0 46 34.598336916086346 38.0 34.0 40.0 22.0 41.0 47 34.45806569953789 38.0 34.0 40.0 21.0 41.0 48 34.36245446471096 38.0 33.0 40.0 20.0 41.0 49 34.22367641947816 38.0 33.0 40.0 20.0 41.0 50 34.0192277987308 38.0 33.0 40.0 20.0 41.0 51 32.0236847863864 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 16.0 9 16.0 10 28.0 11 14.0 12 7.0 13 8.0 14 14.0 15 16.0 16 30.0 17 71.0 18 101.0 19 215.0 20 415.0 21 607.0 22 1074.0 23 1667.0 24 2627.0 25 4009.0 26 5365.0 27 5916.0 28 6045.0 29 6052.0 30 6506.0 31 7697.0 32 9735.0 33 12903.0 34 18847.0 35 23562.0 36 27686.0 37 44866.0 38 58988.0 39 65636.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.92928031717018 21.189516907590715 25.163154710569337 16.718048064669762 2 35.06249436842715 23.54673240053033 25.477557377682235 15.91321585336028 3 29.877585696448573 23.356867944443728 31.243966171946404 15.521580187161302 4 26.1736197819455 24.936282775753988 31.463758415178862 17.426339027121653 5 24.221877534207785 28.84041087955514 29.514912404906866 17.42279918133021 6 25.353662774981657 32.88902905247982 28.115707904797453 13.641600267741063 7 59.97078018201244 26.841685224040056 9.78091572592583 3.4066188680216767 8 82.20068994812517 3.876452945795307 10.967729478548534 2.95512762753099 9 75.51713928971385 7.427883687103376 12.655592312742158 4.399384710440614 10 31.94035038037252 37.489219560544235 18.43648229433496 12.133947764748285 11 29.132287255267936 24.06966416517564 29.65586262823896 17.142185951317465 12 27.151582632872937 22.09282119273495 31.58025152213369 19.17534465225842 13 25.05020144940595 21.752030584267636 34.11317208799413 19.084595878332284 14 20.615418281050886 24.694607849447138 34.084853321662564 20.605120547839405 15 20.196751065171778 24.94497148815117 35.657510265552794 19.200767181124256 16 24.547221542857876 25.370396591450305 32.112837411664756 17.969544454027055 17 24.42525776513445 24.339336053651188 31.426750936450116 19.808655244764246 18 24.342232291116918 23.9695830705266 32.65346840526729 19.034716233089192 19 23.022835223396452 26.080940183042205 30.858766589004595 20.037458004556747 20 23.613024058079215 26.87450924865164 30.97686871677372 18.535597976495424 21 23.976019153783774 25.884961447861286 32.329089809105774 17.809929589249165 22 23.773604335345684 22.842946696358464 32.61742633902712 20.766022629268733 23 20.682675351088342 25.22140126404675 33.32089023903613 20.775033145828775 24 21.390644509377374 24.778276931790387 33.099488974989384 20.731589583842858 25 22.102797121783567 26.25213999768301 30.581693204783296 21.063369675750128 26 21.616872835867003 26.090916112090827 30.836883905930208 21.455327146111962 27 21.397080592634545 25.229124563955356 31.99312626308134 21.380668580328756 28 20.083797804008395 26.01239589635331 32.312034188474264 21.59177211116403 29 22.279145803030108 25.165729143872205 31.718627312162912 20.836497740934774 30 23.398380681452497 24.36121873672558 31.803583611157592 20.43681697066433 31 22.970381144850492 24.668863516418448 31.586365801228006 20.77438953750306 32 23.801923101677243 25.413196545110505 31.068582903188435 19.716297450023816 33 23.206907204551598 24.87127833485654 30.911220667550555 21.010593793041306 34 20.983240439198322 25.38648679959324 32.788947957830786 20.841324803377656 35 21.18179360768211 26.647959117999147 31.08628213214566 21.083965142173078 36 21.941895040354243 27.381672609316876 29.83671656776552 20.839715782563363 37 21.32757089345708 27.618842277343695 29.892710492102925 21.160876337096298 38 21.270289752468237 27.71055646375842 29.824488009576893 21.194665774196455 39 21.046957663444335 26.2646903600345 29.92521271255165 22.763139263969517 40 22.715834052029297 26.02977332114768 29.487880855226745 21.766511771596278 41 20.83102707016618 26.242807676960112 29.412578681117818 23.513586571755894 42 21.499736120586455 26.432672133046715 29.8508759509313 22.21671579543553 43 21.550581178318122 26.016901154633338 30.186517692792876 22.245999974255668 44 21.833768841633734 25.927117793195777 30.217410892427303 22.021702472743186 45 21.23971835699667 25.495578410802324 29.51587781739545 23.748825414805566 46 21.631032219032786 26.501216419735606 29.60823561213588 22.25951574909573 47 20.59964987707081 26.223177623025734 30.952089796233608 22.225082703669855 48 21.053393746701506 26.062597345759265 30.39504679032528 22.488962117213948 49 21.68284268925303 25.113918673651963 30.83881473090736 22.36442390618765 50 20.540759715267676 25.698315033403276 30.945010104650716 22.815915146678336 51 20.349929846692497 24.853900910062173 30.377991169693768 24.418178073551562 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 238.0 2 395.0 3 3856.5 4 7318.0 5 5027.0 6 2736.0 7 2346.5 8 1957.0 9 1849.0 10 1741.0 11 1743.0 12 1745.0 13 1660.0 14 1575.0 15 1500.5 16 1426.0 17 1368.0 18 1310.0 19 1282.5 20 1255.0 21 1300.0 22 1345.0 23 1518.5 24 1692.0 25 2002.0 26 2695.0 27 3078.0 28 3701.5 29 4325.0 30 5049.0 31 5773.0 32 6657.0 33 7541.0 34 8683.0 35 9825.0 36 10834.5 37 11844.0 38 12305.0 39 12766.0 40 13836.0 41 14906.0 42 15914.0 43 16922.0 44 18529.5 45 20137.0 46 22689.5 47 25242.0 48 25721.5 49 26201.0 50 25564.0 51 24927.0 52 22735.5 53 20544.0 54 18662.0 55 16780.0 56 15710.5 57 14641.0 58 13686.0 59 12731.0 60 11769.0 61 10807.0 62 9492.0 63 8177.0 64 6826.5 65 5476.0 66 4533.0 67 3590.0 68 3170.5 69 2751.0 70 2311.5 71 1872.0 72 1521.0 73 1170.0 74 982.0 75 617.0 76 440.0 77 365.0 78 290.0 79 213.0 80 136.0 81 107.5 82 79.0 83 57.5 84 36.0 85 34.0 86 32.0 87 19.5 88 7.0 89 8.0 90 9.0 91 6.0 92 3.0 93 4.5 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 310748.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.52649939895553 #Duplication Level Percentage of deduplicated Percentage of total 1 70.53725560707169 35.6400060303468 2 11.130140204656701 11.247340447217551 3 5.732256745674515 8.688926010449464 4 3.7154629806285944 7.509173522302888 5 2.4921243666391533 6.295916015655781 6 1.7383397909630802 5.269933464196593 7 1.2777337590484845 4.5191589806011905 8 0.899965053843218 3.637766700167227 9 0.6650556824524113 3.0242641985733347 >10 1.7926867381352372 11.571328122567518 >50 0.008856899747230003 0.31229675181475747 >100 0.008856899747230003 0.8985324148938416 >500 6.326356962307143E-4 0.2122467177123838 >1k 6.326356962307143E-4 1.1731106235006754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3670 1.1810212776912483 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 664 0.2136779641381441 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTT 338 0.10876980704622395 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 334 0.10748259039478934 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2180416285865074E-4 0.0 0.0 0.08334727818039055 0.0 2 3.2180416285865074E-4 0.0 0.0 0.29799065480711057 0.0 3 3.2180416285865074E-4 0.0 0.0 0.4566401070964254 0.0 4 3.2180416285865074E-4 0.0 0.0 0.640390284088715 0.0 5 3.2180416285865074E-4 0.0 0.0 1.2151325189542652 0.0 6 3.2180416285865074E-4 0.0 0.0 1.758016141696809 0.0 7 3.2180416285865074E-4 0.0 0.0 2.2304246527733085 0.0 8 3.2180416285865074E-4 0.0 0.0 3.0410493390142497 0.0 9 3.2180416285865074E-4 0.0 0.0 3.55368337044808 0.0 10 3.2180416285865074E-4 0.0 0.0 4.385547131437693 0.0 11 3.2180416285865074E-4 0.0 0.0 5.052325356880816 0.0 12 3.2180416285865074E-4 0.0 0.0 5.635434499980692 0.0 13 3.2180416285865074E-4 0.0 0.0 5.933746958950661 0.0 14 3.2180416285865074E-4 0.0 0.0 6.112026465174353 0.0 15 3.2180416285865074E-4 0.0 0.0 6.292236796375198 0.0 16 3.2180416285865074E-4 0.0 0.0 6.595054513625188 0.0 17 3.2180416285865074E-4 0.0 0.0 6.936810534581076 0.0 18 3.2180416285865074E-4 0.0 0.0 7.340674758968682 0.0 19 3.2180416285865074E-4 0.0 0.0 7.580740664461236 0.0 20 3.2180416285865074E-4 0.0 0.0 7.846550902982481 0.0 21 3.2180416285865074E-4 0.0 0.0 8.181549036518337 0.0 22 3.2180416285865074E-4 0.0 0.0 8.534568203174276 0.0 23 3.2180416285865074E-4 0.0 0.0 8.87728963661874 0.0 24 3.2180416285865074E-4 0.0 0.0 9.167878795680101 0.0 25 3.2180416285865074E-4 0.0 0.0 9.410519134475523 0.0 26 3.2180416285865074E-4 0.0 0.0 9.682121847928224 0.0 27 3.2180416285865074E-4 0.0 0.0 9.955011778032361 0.0 28 3.2180416285865074E-4 0.0 0.0 10.232406966416518 0.0 29 3.2180416285865074E-4 0.0 0.0 10.518169063035 0.0 30 3.2180416285865074E-4 0.0 0.0 10.884060396205285 0.0 31 3.2180416285865074E-4 0.0 0.0 11.182051051012396 0.0 32 3.2180416285865074E-4 0.0 0.0 11.480685314145223 0.0 33 3.2180416285865074E-4 0.0 0.0 11.77706694813804 0.0 34 3.2180416285865074E-4 0.0 0.0 12.104341781765289 0.0 35 3.2180416285865074E-4 0.0 0.0 12.427111357112516 0.0 36 3.2180416285865074E-4 0.0 0.0 12.725745620245343 0.0 37 3.2180416285865074E-4 0.0 0.0 13.051411433058298 0.0 38 3.2180416285865074E-4 0.0 0.0 13.404752403877097 0.0 39 3.2180416285865074E-4 0.0 0.0 13.889389473142225 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 50 2.1827873E-11 45.0 25 CGGTTTA 25 3.8842147E-5 45.0 1 GCTTACG 20 7.025334E-4 45.0 1 GCGATCG 25 3.8842147E-5 45.0 9 TATAGCG 25 3.8842147E-5 45.0 1 CGGTCTA 40 6.7866495E-9 45.0 31 CGCACGG 20 7.025334E-4 45.0 2 CGTTTTA 230 0.0 44.02174 1 CGTTTTT 1655 0.0 43.640484 1 TAGGGCG 75 0.0 42.0 5 TTCCGCC 65 0.0 41.538464 34 CGCCCAA 65 0.0 41.538464 37 ATTTCCG 60 3.6379788E-12 41.250004 32 TCTCACG 55 6.002665E-11 40.90909 23 CGACGGT 50 1.0768417E-9 40.5 28 GACGGTC 50 1.0768417E-9 40.5 29 GGCGATC 90 0.0 40.0 8 AGGCGAT 125 0.0 39.600002 7 CGTTTCT 40 3.447367E-7 39.375 1 TCCGCCC 70 0.0 38.571426 35 >>END_MODULE