SRR2936392.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936392.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	144831
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	485	0.334873058944563	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	190	0.13118738391642673	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAATCC	25	3.8738803E-5	45.0	8
GGGTCGT	20	7.012857E-4	45.0	7
AGGACCG	20	7.012857E-4	45.0	7
ATGTCTC	20	7.012857E-4	45.0	7
AGGCGAT	35	1.2021155E-7	45.0	7
GTCGTTT	20	7.012857E-4	45.0	9
TGCCTTA	20	7.012857E-4	45.0	12
TATAGCG	20	7.012857E-4	45.0	1
CGGTCTA	25	3.8738803E-5	45.0	31
CAGTCAG	20	7.012857E-4	45.0	33
ATTGCGG	20	7.012857E-4	45.0	2
AGCTACG	35	1.2021155E-7	45.0	9
CTAGGAC	20	7.012857E-4	45.0	5
TCTGGTA	20	7.012857E-4	45.0	14
TTGGGTA	20	7.012857E-4	45.0	5
TTGGGCG	35	1.2021155E-7	45.0	5
ATAGCGG	30	2.1523356E-6	44.999996	2
GACCTAT	30	2.1523356E-6	44.999996	33
CGGGAAT	50	1.0677468E-9	40.5	6
TAGGGAC	135	0.0	40.0	5