SRR2936391.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936391.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	258830
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	933	0.3604682610207472	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	20	7.023149E-4	45.0	21
CTCGTGC	20	7.023149E-4	45.0	45
TTAATCG	20	7.023149E-4	45.0	20
GACACGA	20	7.023149E-4	45.0	25
CTACGAA	25	3.8824037E-5	45.0	11
GTCAAGC	25	3.8824037E-5	45.0	16
GGACGTA	25	3.8824037E-5	45.0	8
TCGTAAA	25	3.8824037E-5	45.0	1
ACGTCGA	20	7.023149E-4	45.0	30
CGTAAAG	25	3.8824037E-5	45.0	2
CGTCGAC	20	7.023149E-4	45.0	31
CGATGCA	20	7.023149E-4	45.0	10
TACGGGA	100	0.0	40.5	4
CGTTTTT	290	0.0	40.344826	1
TTGACGG	45	1.9183062E-8	40.000004	2
ACGACGC	40	3.444402E-7	39.375	14
GGCCGGT	105	0.0	38.57143	9
CGGGATC	70	0.0	38.571426	6
ACGGGAT	95	0.0	37.894737	5
TACGAAT	30	1.1374791E-4	37.500004	12