##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936390.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 104201 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.924213779138395 33.0 31.0 34.0 30.0 34.0 2 32.02822429727162 33.0 31.0 34.0 30.0 34.0 3 31.893964549284554 33.0 31.0 34.0 30.0 34.0 4 35.667277665281524 37.0 35.0 37.0 33.0 37.0 5 35.77840903638161 37.0 35.0 37.0 35.0 37.0 6 35.74981046247157 37.0 35.0 37.0 35.0 37.0 7 26.920010364583835 35.0 11.0 37.0 0.0 37.0 8 31.197157416915385 35.0 19.0 37.0 17.0 37.0 9 35.9605378067389 39.0 32.0 39.0 32.0 39.0 10 36.60366983042389 38.0 35.0 39.0 32.0 39.0 11 36.97329200295582 39.0 37.0 39.0 33.0 39.0 12 36.97548008176505 39.0 37.0 39.0 33.0 39.0 13 36.881613420216695 39.0 37.0 39.0 33.0 39.0 14 38.031477624974805 40.0 37.0 41.0 33.0 41.0 15 38.09616030556329 40.0 37.0 41.0 33.0 41.0 16 38.07392443450639 40.0 37.0 41.0 33.0 41.0 17 37.97575839003464 40.0 37.0 41.0 33.0 41.0 18 37.87827372098157 40.0 36.0 41.0 33.0 41.0 19 37.734071649984166 40.0 36.0 41.0 33.0 41.0 20 37.82626846191495 40.0 36.0 41.0 33.0 41.0 21 37.76547250026391 40.0 36.0 41.0 33.0 41.0 22 37.78654715405802 39.0 36.0 41.0 33.0 41.0 23 37.76014625579409 39.0 36.0 41.0 33.0 41.0 24 37.69521405744666 39.0 36.0 41.0 33.0 41.0 25 37.58582931065921 39.0 36.0 41.0 33.0 41.0 26 37.45735645531233 39.0 35.0 41.0 33.0 41.0 27 37.378124970009885 39.0 35.0 41.0 33.0 41.0 28 37.335620579457014 39.0 35.0 41.0 32.0 41.0 29 37.31662843926642 39.0 35.0 41.0 32.0 41.0 30 37.24654273951305 39.0 35.0 41.0 32.0 41.0 31 37.10901047014904 39.0 35.0 41.0 32.0 41.0 32 36.94565311273404 39.0 35.0 41.0 31.0 41.0 33 36.88797612306983 39.0 35.0 41.0 31.0 41.0 34 36.699206341589814 39.0 35.0 41.0 31.0 41.0 35 36.53352654964924 39.0 35.0 41.0 30.0 41.0 36 36.387625838523626 39.0 35.0 41.0 30.0 41.0 37 36.320985403211104 39.0 35.0 40.0 30.0 41.0 38 36.15555512902947 39.0 35.0 40.0 30.0 41.0 39 36.12183184422415 39.0 35.0 40.0 30.0 41.0 40 35.88505868465754 39.0 35.0 40.0 29.0 41.0 41 35.751326762699016 38.0 35.0 40.0 28.0 41.0 42 35.705156380457 38.0 35.0 40.0 27.0 41.0 43 35.693716950892984 38.0 35.0 40.0 27.0 41.0 44 35.515407721614956 38.0 34.0 40.0 27.0 41.0 45 35.3876930163818 38.0 34.0 40.0 27.0 41.0 46 35.22746422779052 38.0 34.0 40.0 26.0 41.0 47 35.005854070498366 38.0 34.0 40.0 25.0 41.0 48 34.905317607316626 38.0 34.0 40.0 24.0 41.0 49 34.752056122302086 38.0 34.0 40.0 24.0 41.0 50 34.55530177253577 37.0 34.0 40.0 24.0 41.0 51 32.38123434515983 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 2.0 11 5.0 12 4.0 13 0.0 14 2.0 15 6.0 16 13.0 17 25.0 18 35.0 19 76.0 20 120.0 21 177.0 22 289.0 23 411.0 24 715.0 25 904.0 26 1130.0 27 1402.0 28 1603.0 29 1867.0 30 2158.0 31 2765.0 32 3671.0 33 5057.0 34 7557.0 35 9382.0 36 9872.0 37 15297.0 38 19337.0 39 20299.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77982936824023 21.371196053780675 26.42776940720338 10.421205170775712 2 30.46515868369785 25.776144182877324 26.675367798773525 17.0833293346513 3 30.661893839790405 25.82316868360188 27.570752679916698 15.94418479669101 4 26.860586750607002 26.089001065248894 28.749244249095497 18.301167935048607 5 26.10339632057274 30.03426070767075 25.685933916181224 18.17640905557528 6 24.979606721624553 35.81059682728573 25.562134720396156 13.647661730693564 7 62.007082465619334 27.22238750107964 7.258087734282781 3.512442299018244 8 83.43010143856586 5.593996218846269 7.36077388892621 3.615128453661673 9 77.6182570224854 7.02968301647777 8.916421147589755 6.435638813447088 10 38.44396886786115 31.616779109605474 16.038233798140134 13.90101822439324 11 31.914281052964945 25.010316599648757 25.519908638112877 17.555493709273424 12 28.614888532739606 24.08902025892266 28.30683006880932 18.989261139528413 13 24.48536962217253 27.65232579341849 30.056333432500647 17.80597115190833 14 21.068895691979925 29.946929492039427 28.62256600224566 20.361608813734993 15 19.60921680214201 26.78093300448172 34.94784119154327 18.662009001832995 16 23.310716787746756 26.00838763543536 30.88166140440111 19.79923417241677 17 23.082312069941747 25.047744263490753 28.55922687882074 23.310716787746756 18 24.945058108847324 24.9412193740943 30.69164403412635 19.422078482932026 19 23.97865663477318 27.418162973483938 27.312597767775742 21.29058262396714 20 24.6926612988359 28.029481482903236 28.119691749599333 19.15816546866153 21 24.0573506972102 28.629283788063454 28.599533593727504 18.71383192099884 22 22.62838168539649 25.590925231043848 28.03140085027975 23.749292233279913 23 20.315543996698686 29.573612537307703 28.739647412212932 21.371196053780675 24 21.925893225592844 26.17441291350371 30.094720780030904 21.804973080872543 25 21.27042926651376 29.287626798207313 28.066909146745232 21.3750347885337 26 20.29155190449228 28.819301158338213 28.22333758793102 22.66580934923849 27 20.945096496194854 28.85193040373893 28.278039558161627 21.924933541904586 28 18.116908666903388 28.62544505331043 31.139816316542067 22.117829963244116 29 20.03147762497481 27.085152733658983 29.752113703323385 23.131255938042823 30 21.565052158808456 27.91527912400073 29.5208299344536 20.99883878273721 31 22.762737401752382 28.11009491271677 26.675367798773525 22.451799886757325 32 23.304958685617223 28.16671625032389 26.374986804349287 22.1533382597096 33 22.375984875385075 27.001660252780685 26.280937802900162 24.341417068934078 34 20.732046717401946 28.063070411992207 28.225256955307533 22.979625915298318 35 19.851057091582614 29.156150132916192 27.732939223232023 23.25985355226917 36 21.573689312002763 29.985316839569677 26.570762276753584 21.870231571673976 37 20.34625387472289 29.98723620694619 27.648487058665467 22.018022859665454 38 19.455667412020997 31.10814675482961 26.217598679475245 23.21858715367415 39 22.147580157580062 26.799166994558593 27.13697565282483 23.916277195036518 40 22.972908129480523 26.423930672450364 27.926795328259807 22.676365869809313 41 20.14951871863034 27.164806479784264 27.916238807688988 24.769435993896412 42 21.33856680837996 26.799166994558593 28.19358739359507 23.668678803466378 43 21.086169998368536 26.6341014001785 28.218539169489738 24.061189431963225 44 20.781950269191274 26.762699014404852 28.08418345313385 24.371167263270028 45 20.782909952879532 27.55155900615157 26.25118760856422 25.414343432404678 46 22.348154048425638 27.94406963464842 26.890336944942945 22.817439371982996 47 20.328979568334276 27.230064970585694 30.03809944242378 22.40285601865625 48 21.10344430475715 27.423921075613478 28.350975518469113 23.121659101160258 49 21.315534399861804 25.625473843821077 30.051535014059365 23.00745674225775 50 19.77044366176908 27.227185919520924 29.30394142090767 23.698428997802324 51 20.478690223702266 26.118751259584837 26.991103732209865 26.41145478450303 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 47.0 1 115.5 2 184.0 3 409.0 4 634.0 5 458.0 6 282.0 7 264.0 8 246.0 9 242.0 10 238.0 11 237.0 12 236.0 13 257.0 14 278.0 15 260.5 16 243.0 17 260.0 18 277.0 19 329.0 20 381.0 21 409.0 22 437.0 23 526.0 24 615.0 25 717.0 26 945.5 27 1072.0 28 1215.0 29 1358.0 30 1646.5 31 1935.0 32 2232.5 33 2530.0 34 2965.0 35 3400.0 36 3620.0 37 3840.0 38 4274.5 39 4709.0 40 5095.5 41 5482.0 42 6130.0 43 6778.0 44 7379.0 45 7980.0 46 9452.0 47 10924.0 48 10200.5 49 9477.0 50 9347.0 51 9217.0 52 8367.0 53 7517.0 54 6508.0 55 5499.0 56 4848.5 57 4198.0 58 3910.0 59 3622.0 60 3287.0 61 2952.0 62 2565.0 63 2178.0 64 1899.0 65 1620.0 66 1374.0 67 1128.0 68 901.0 69 674.0 70 584.5 71 495.0 72 393.5 73 292.0 74 230.5 75 123.5 76 78.0 77 72.0 78 66.0 79 53.5 80 41.0 81 38.5 82 36.0 83 24.0 84 12.0 85 7.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 104201.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.29124480571203 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99427396858023 38.692526943119546 2 9.552562032007048 9.990307194748612 3 4.88731463808545 7.666912985479986 4 3.097929819409778 6.479784263106881 5 2.220672441638526 5.806086313950922 6 1.5764939069152841 4.946209729273232 7 1.2149464102187637 4.447174211379929 8 0.8974453090588754 3.7542825884588438 9 0.6588606665687857 3.100737996756269 >10 1.8701365438261637 12.722526655214441 >50 0.01651739832623697 0.5662133760712469 >100 0.012846865364850977 1.8272377424400916 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCG 456 0.4376157618448959 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGC 394 0.3781153731730022 No Hit GAATCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTC 342 0.32821182138367194 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 306 0.2936632086064433 No Hit GCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC 172 0.16506559438009233 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCG 126 0.12092014472030019 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCT 108 0.10364583833168588 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0815731135017898 0.0 2 0.0 0.0 0.0 0.5431809675530945 0.0 3 0.0 0.0 0.0 0.7312789704513393 0.0 4 0.0 0.0 0.0 1.0201437606165007 0.0 5 0.0 0.0 0.0 1.9855855510023896 0.0 6 0.0 0.0 0.0 2.3838542816287753 0.0 7 0.0 0.0 0.0 2.859857391003925 0.0 8 0.0 0.0 0.0 3.7974683544303796 0.0 9 0.0 0.0 0.0 4.148712584332204 0.0 10 0.0 0.0 0.0 5.548891085498219 0.0 11 0.0 0.0 0.0 6.50857477375457 0.0 12 0.0 0.0 0.0 7.73409084365793 0.0 13 0.0 0.0 0.0 8.13907736010211 0.0 14 0.0 0.0 0.0 8.285908964405332 0.0 15 0.0 0.0 0.0 8.603564265218184 0.0 16 0.0 0.0 0.0 9.14098713064174 0.0 17 0.0 0.0 0.0 9.782055834396983 0.0 18 0.0 0.0 0.0 10.503737967965758 0.0 19 0.0 0.0 0.0 10.980700761029166 0.0 20 0.0 0.0 0.0 11.39720348173242 0.0 21 0.0 0.0 0.0 11.884722795366647 0.0 22 0.0 0.0 0.0 12.426944079231486 0.0 23 0.0 0.0 0.0 13.067053099298471 0.0 24 0.0 0.0 0.0 13.488354238443009 0.0 25 0.0 0.0 0.0 13.925970000287904 0.0 26 0.0 0.0 0.0 14.317520945096495 0.0 27 0.0 0.0 0.0 14.657248970739245 0.0 28 0.0 0.0 0.0 15.074711375130757 0.0 29 0.0 0.0 0.0 15.497931881651807 0.0 30 0.0 0.0 0.0 16.013282022245466 0.0 31 0.0 0.0 0.0 16.424986324507444 0.0 32 0.0 0.0 0.0 16.82517442251034 0.0 33 0.0 0.0 0.0 17.263749868043494 0.0 34 0.0 0.0 0.0 17.65434112916383 0.0 35 0.0 0.0 0.0 18.105392462644314 0.0 36 0.0 0.0 0.0 18.511338662776748 0.0 37 0.0 0.0 0.0 18.919204230285697 0.0 38 0.0 0.0 0.0 19.379852400648748 0.0 39 0.0 0.0 0.0 19.920154317137072 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGTC 20 7.0037605E-4 45.000004 12 GTACAAG 20 7.0037605E-4 45.000004 1 GAATCGG 20 7.0037605E-4 45.000004 2 GCGTTAG 20 7.0037605E-4 45.000004 1 CAGGGCG 20 7.0037605E-4 45.000004 5 CGTTTTA 20 7.0037605E-4 45.000004 1 CGATATG 30 2.146484E-6 45.000004 10 GAGGGCG 30 2.146484E-6 45.000004 5 AATAAGG 20 7.0037605E-4 45.000004 3 ACGAAGA 30 2.146484E-6 45.000004 33 CTATCTC 25 3.8663526E-5 45.0 5 GCGATAT 35 1.1977681E-7 45.0 9 CTTCTGC 50 2.1827873E-11 45.0 45 GCCACCG 25 3.8663526E-5 45.0 9 CTAGGAC 25 3.8663526E-5 45.0 5 ACGGCTG 60 3.6379788E-12 41.250004 8 GGCGATA 55 6.002665E-11 40.909092 8 TACGGCT 50 1.0622898E-9 40.5 7 ATGGGAC 80 0.0 39.375004 5 GAATGAC 40 3.4180266E-7 39.375004 1 >>END_MODULE