##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936389.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 132157 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7345051718789 31.0 31.0 34.0 30.0 34.0 2 31.855959200042374 31.0 31.0 34.0 30.0 34.0 3 31.75485218338794 31.0 31.0 34.0 30.0 34.0 4 35.54422391549445 37.0 35.0 37.0 33.0 37.0 5 35.64424888579492 37.0 35.0 37.0 35.0 37.0 6 35.63566818254046 37.0 35.0 37.0 33.0 37.0 7 27.297116308632916 35.0 25.0 37.0 0.0 37.0 8 31.386055978873614 35.0 27.0 37.0 17.0 37.0 9 35.97076204816998 39.0 32.0 39.0 32.0 39.0 10 36.47341419675083 37.0 35.0 39.0 32.0 39.0 11 36.83577865720318 39.0 37.0 39.0 33.0 39.0 12 36.997896441353845 39.0 37.0 39.0 33.0 39.0 13 36.9484703799269 39.0 37.0 39.0 33.0 39.0 14 38.05864237232988 40.0 37.0 41.0 33.0 41.0 15 38.16462238095598 40.0 37.0 41.0 33.0 41.0 16 38.07206580052513 40.0 37.0 41.0 33.0 41.0 17 38.007521357173665 40.0 37.0 41.0 33.0 41.0 18 37.92726075803779 40.0 37.0 41.0 33.0 41.0 19 37.8139031606347 39.0 37.0 41.0 33.0 41.0 20 37.87736555763221 39.0 37.0 41.0 33.0 41.0 21 37.830323024887065 39.0 36.0 41.0 33.0 41.0 22 37.879272380577646 39.0 37.0 41.0 33.0 41.0 23 37.84736336327247 39.0 36.0 41.0 33.0 41.0 24 37.80909826948251 39.0 36.0 41.0 33.0 41.0 25 37.71202433469283 39.0 36.0 41.0 33.0 41.0 26 37.59106214578115 39.0 36.0 41.0 33.0 41.0 27 37.415467966131196 39.0 36.0 41.0 32.0 41.0 28 37.422194813744255 39.0 36.0 41.0 32.0 41.0 29 37.295353254084155 39.0 36.0 41.0 32.0 41.0 30 37.13086707476713 39.0 36.0 41.0 31.0 41.0 31 37.02812563844518 39.0 35.0 41.0 31.0 41.0 32 36.70168814364733 39.0 35.0 41.0 30.0 41.0 33 36.689377028836915 39.0 35.0 40.0 30.0 41.0 34 36.56221766535257 39.0 35.0 40.0 30.0 41.0 35 36.29507328404852 39.0 35.0 40.0 30.0 41.0 36 36.184076515054066 39.0 35.0 40.0 30.0 41.0 37 35.92410542006856 39.0 35.0 40.0 28.0 41.0 38 35.85971231187148 38.0 35.0 40.0 28.0 41.0 39 35.810066814470666 39.0 35.0 40.0 27.0 41.0 40 35.67877600127122 38.0 35.0 40.0 27.0 41.0 41 35.72410088001392 38.0 35.0 40.0 27.0 41.0 42 35.601337802764895 38.0 35.0 40.0 26.0 41.0 43 35.50754784082569 38.0 35.0 40.0 26.0 41.0 44 35.22094175866583 38.0 34.0 40.0 25.0 41.0 45 35.08868240047822 38.0 34.0 40.0 24.0 41.0 46 34.84770386736987 38.0 34.0 40.0 23.0 41.0 47 34.68352035836165 38.0 33.0 40.0 23.0 41.0 48 34.56191499504377 38.0 33.0 40.0 23.0 41.0 49 34.35483553652096 38.0 33.0 40.0 22.0 41.0 50 34.050848611878294 38.0 33.0 40.0 20.0 41.0 51 31.49939087600354 35.0 28.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 7.0 10 9.0 11 4.0 12 3.0 13 1.0 14 3.0 15 4.0 16 5.0 17 7.0 18 35.0 19 71.0 20 158.0 21 228.0 22 403.0 23 606.0 24 878.0 25 1272.0 26 1521.0 27 1882.0 28 2253.0 29 2570.0 30 3239.0 31 3842.0 32 4798.0 33 6395.0 34 9048.0 35 11873.0 36 12927.0 37 19243.0 38 24485.0 39 24378.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.1588338113002 23.041533933124995 29.365830035488095 10.433802220086715 2 27.683739794335526 26.749245215917433 28.335237634026196 17.231777355720848 3 28.920904681553 26.286159643454376 29.601156200579616 15.191779474413009 4 25.98878606505898 25.185196395196623 30.654448875201467 18.17156866454293 5 24.398253592318227 28.936038196992968 27.832804921419218 18.83290328926958 6 24.58288248068585 34.5081985819896 26.341396974810266 14.567521962514283 7 61.99444599983354 25.870744644627226 7.684799140416324 4.450010215122922 8 81.69979645421733 4.532487874270754 8.311326679631046 5.456388991880869 9 76.06256195282883 7.02422119146167 10.013090490855573 6.900126364853924 10 34.135157426394365 36.51565940510151 17.00023456948932 12.348948599014808 11 23.998728784703044 26.398147657710147 30.355561945262078 19.247561612324734 12 23.208002602964655 23.30410042600846 34.21006832782221 19.27782864320467 13 20.752589722829665 26.166604871478622 35.58948826017539 17.491317145516316 14 17.01536808492929 30.679419175677413 31.204552161444344 21.100660577948954 15 15.383975120500617 27.072345770560773 38.81822377929281 18.725455329645797 16 17.247667546932817 27.844911733771195 33.368644869359926 21.538775849936062 17 17.700159658587893 27.468087199315967 30.554567673297665 24.277185468798475 18 18.619520721566015 26.44506155557405 34.61261983852539 20.32279788433454 19 18.820039801145608 28.58342728724169 30.66125895714945 21.935273954463252 20 19.831715308307544 29.410473906036 31.521599309911696 19.236211475744756 21 18.972131631317296 29.30983602836021 32.51511459854567 19.202917741776826 22 18.055797271427167 26.365610599514216 30.068781827674663 25.50981030138396 23 16.375220381818593 28.541810119781776 32.354699334882 22.72827016351763 24 18.933541166945375 25.863934562679237 32.08910613891054 23.11341813146485 25 16.624166710806087 29.923500079450953 30.595428164985584 22.856905044757372 26 17.88857192581551 29.034406047352768 30.33967175405011 22.737350272781615 27 18.726212005417796 30.110398995134574 29.821348850231168 21.342040149216462 28 16.03925633905128 27.708710094811472 33.353511353919956 22.898522212217287 29 19.831715308307544 24.452734247902118 32.67931324106934 23.036237202721004 30 19.550988596896115 29.10780359723662 30.587104731493604 20.75410307437366 31 22.227350802454655 28.19146923734649 26.98986811141294 22.591311848785914 32 21.415437699100313 29.049539562792738 28.438145539017984 21.09687719908896 33 19.637249634903938 26.983058029464956 29.941660297978917 23.43803203765219 34 19.82868860521955 25.120878954576753 30.066511800358665 24.983920639845035 35 17.72891333792383 28.109748253970658 30.149746135278495 24.011592272827016 36 21.398034156344348 26.35426046293424 29.682877183955448 22.56482819676597 37 18.277503272622713 28.625801130473604 31.840159809923048 21.25653578698064 38 17.71529317402786 28.45327905445795 30.6362886566735 23.195139114840682 39 18.594550421090066 24.782644884493443 32.521924680493655 24.100880013922836 40 19.19762101137284 25.586991230127804 31.849996594959023 23.365391163540334 41 17.350575451924605 27.172226972464568 27.648932708823597 27.82826486678723 42 19.639519662219936 26.53359262089787 30.08845539774662 23.738432319135576 43 21.149087827356855 25.261620648168464 29.504301701763815 24.084989822710867 44 20.163895972214867 25.07169502939685 30.089212073518617 24.675196924869663 45 19.277071967432676 25.331991494964324 29.67455375046346 25.71638278713954 46 21.924680493655273 26.306589889298333 29.520191892975777 22.248537724070612 47 17.140976263081033 25.294914382136398 32.925232866968834 24.63887648781374 48 18.586983663370084 25.061101568588874 30.833781033165096 25.518133734875942 49 19.634979607587944 22.296208297706517 34.170721187678296 23.898090907027246 50 18.786746067177678 22.542127923606014 32.90480262112487 25.76632338809144 51 18.04520381061919 22.64200912550981 30.067268476130664 29.24551858774034 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65.0 1 104.0 2 143.0 3 390.0 4 637.0 5 454.0 6 271.0 7 260.0 8 249.0 9 266.0 10 283.0 11 291.5 12 300.0 13 307.0 14 314.0 15 346.0 16 378.0 17 376.5 18 375.0 19 436.0 20 497.0 21 606.0 22 715.0 23 810.0 24 905.0 25 1057.5 26 1527.0 27 1844.0 28 2090.5 29 2337.0 30 2731.5 31 3126.0 32 3497.5 33 3869.0 34 4425.0 35 4981.0 36 5289.5 37 5598.0 38 6168.0 39 6738.0 40 7385.0 41 8032.0 42 8861.5 43 9691.0 44 10953.5 45 12216.0 46 14241.0 47 16266.0 48 16116.5 49 15967.0 50 14508.0 51 13049.0 52 10588.0 53 8127.0 54 6415.0 55 4703.0 56 3863.0 57 3023.0 58 2521.0 59 2019.0 60 1755.0 61 1491.0 62 1291.5 63 1092.0 64 917.0 65 742.0 66 570.0 67 398.0 68 317.5 69 237.0 70 173.5 71 110.0 72 92.0 73 74.0 74 55.5 75 27.5 76 18.0 77 14.5 78 11.0 79 8.5 80 6.0 81 7.5 82 9.0 83 5.0 84 1.0 85 2.0 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 132157.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.50508864456669 #Duplication Level Percentage of deduplicated Percentage of total 1 77.48069002723793 44.555339482585104 2 9.904338329144572 11.390997071664763 3 4.198849954603471 7.243657165341223 4 2.377725436530389 5.469252480004843 5 1.625064147268971 4.672472892090468 6 1.1329394581365055 3.908987038144026 7 0.7868731660460281 3.1674447815855387 8 0.6381830861744543 2.9359019953540106 9 0.4184375699040751 2.165606059459582 >10 1.4040027895837994 11.272955651233003 >50 0.01710593839230496 0.6817648705706092 >100 0.014474255562719581 2.144419137843625 >500 0.0013158414147926892 0.3912013741232019 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCG 517 0.3912013741232019 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 499 0.37758121022722974 No Hit GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 426 0.3223438788713424 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 374 0.2829967387274227 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 352 0.26634987174345665 No Hit TCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 242 0.18311553682362644 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 240 0.18160218527962954 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 239 0.1808455095076311 TruSeq Adapter, Index 19 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCT 141 0.10669128385178235 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.566757719984564E-4 0.0 0.0 0.29434687530739956 0.0 2 7.566757719984564E-4 0.0 0.0 1.5481586295088419 0.0 3 7.566757719984564E-4 0.0 0.0 2.01956763546388 0.0 4 7.566757719984564E-4 0.0 0.0 2.6634987174345666 0.0 5 7.566757719984564E-4 0.0 0.0 4.778407500170252 0.0 6 7.566757719984564E-4 0.0 0.0 5.677338317304418 0.0 7 7.566757719984564E-4 0.0 0.0 6.766194753210197 0.0 8 7.566757719984564E-4 0.0 0.0 8.837216341169972 0.0 9 7.566757719984564E-4 0.0 0.0 9.528817996776562 0.0 10 7.566757719984564E-4 0.0 0.0 11.800358664315928 0.0 11 7.566757719984564E-4 0.0 0.0 14.008338567007423 0.0 12 7.566757719984564E-4 0.0 0.0 16.16789122029102 0.0 13 7.566757719984564E-4 0.0 0.0 16.94651058967743 0.0 14 7.566757719984564E-4 0.0 0.0 17.218157191824876 0.0 15 7.566757719984564E-4 0.0 0.0 17.747830232223794 0.0 16 7.566757719984564E-4 0.0 0.0 18.738318817769773 0.0 17 7.566757719984564E-4 0.0 0.0 20.120008777438954 0.0 18 7.566757719984564E-4 0.0 0.0 21.67649084043978 0.0 19 7.566757719984564E-4 0.0 0.0 22.548181329782 0.0 20 7.566757719984564E-4 0.0 0.0 23.45619225618015 0.0 21 7.566757719984564E-4 0.0 0.0 24.408090377354206 0.0 22 7.566757719984564E-4 0.0 0.0 25.570344363143835 0.0 23 7.566757719984564E-4 0.0 0.0 26.707628048457515 0.0 24 7.566757719984564E-4 0.0 0.0 27.53921472188382 0.0 25 7.566757719984564E-4 0.0 0.0 28.224006295542424 0.0 26 7.566757719984564E-4 0.0 0.0 28.920148005781 0.0 27 7.566757719984564E-4 0.0 0.0 29.585266009367647 0.0 28 7.566757719984564E-4 0.0 0.0 30.251140688726288 0.0 29 7.566757719984564E-4 0.0 0.0 30.918528719628927 0.0 30 7.566757719984564E-4 0.0 0.0 31.73195517452727 0.0 31 7.566757719984564E-4 0.0 0.0 32.459120591417786 0.0 32 7.566757719984564E-4 0.0 0.0 33.1393721104444 0.0 33 7.566757719984564E-4 0.0 0.0 33.766656325431114 0.0 34 7.566757719984564E-4 0.0 0.0 34.433287680561754 0.0 35 7.566757719984564E-4 0.0 0.0 35.158183070136275 0.0 36 7.566757719984564E-4 0.0 0.0 35.773360472771024 0.0 37 7.566757719984564E-4 0.0 0.0 36.409724797021724 0.0 38 7.566757719984564E-4 0.0 0.0 37.0074986569005 0.0 39 7.566757719984564E-4 0.0 0.0 37.67942674243513 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACTTA 45 3.8016879E-10 45.000004 5 TTAGGCG 20 7.0106203E-4 45.0 5 TTGGCCG 25 3.8720304E-5 45.0 36 GCGACGT 25 3.8720304E-5 45.0 17 CTCGTCC 25 3.8720304E-5 45.0 37 CGACGTC 25 3.8720304E-5 45.0 18 GGCCGCC 25 3.8720304E-5 45.0 38 GTCTCAC 20 7.0106203E-4 45.0 22 GTAGGGT 25 3.8720304E-5 45.0 4 AGGGTAC 25 3.8720304E-5 45.0 6 CATTCTA 25 3.8720304E-5 45.0 45 CAACAAG 20 7.0106203E-4 45.0 2 AAGCGAC 25 3.8720304E-5 45.0 15 CCTCGTC 25 3.8720304E-5 45.0 36 GCGTTAG 20 7.0106203E-4 45.0 1 TGGCCGC 25 3.8720304E-5 45.0 37 CGAGGGT 20 7.0106203E-4 45.0 4 TCGTCCC 25 3.8720304E-5 45.0 38 ACAGCGG 20 7.0106203E-4 45.0 2 AGCGACG 25 3.8720304E-5 45.0 16 >>END_MODULE