##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936387.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 223941 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.999151562241842 33.0 31.0 34.0 30.0 34.0 2 32.138884795548826 33.0 31.0 34.0 30.0 34.0 3 31.82323915674218 33.0 31.0 34.0 30.0 34.0 4 35.649229038005544 37.0 35.0 37.0 33.0 37.0 5 35.817773431394876 37.0 35.0 37.0 35.0 37.0 6 35.83567100263016 37.0 35.0 37.0 35.0 37.0 7 26.87537342425014 36.0 10.0 37.0 0.0 37.0 8 31.253816853546248 37.0 19.0 37.0 17.0 37.0 9 36.088898415207574 39.0 32.0 39.0 32.0 39.0 10 36.76784063659625 38.0 35.0 39.0 33.0 39.0 11 37.257362430282974 39.0 37.0 39.0 34.0 39.0 12 37.345783041068856 39.0 37.0 39.0 34.0 39.0 13 37.34977962945597 39.0 37.0 39.0 34.0 39.0 14 38.587435976440226 40.0 38.0 41.0 35.0 41.0 15 38.65892802121987 40.0 38.0 41.0 35.0 41.0 16 38.56892663692669 40.0 38.0 41.0 34.0 41.0 17 38.47965758838266 40.0 38.0 41.0 34.0 41.0 18 38.35587051946718 40.0 38.0 41.0 34.0 41.0 19 38.22630960833434 40.0 37.0 41.0 34.0 41.0 20 38.25123581657669 40.0 37.0 41.0 34.0 41.0 21 38.19585962374018 40.0 37.0 41.0 34.0 41.0 22 38.15965365877619 40.0 37.0 41.0 34.0 41.0 23 38.11969224036688 40.0 37.0 41.0 34.0 41.0 24 38.07197431466324 40.0 37.0 41.0 34.0 41.0 25 37.96562487440888 40.0 37.0 41.0 33.0 41.0 26 37.88197784237813 40.0 36.0 41.0 33.0 41.0 27 37.78934183557276 40.0 36.0 41.0 33.0 41.0 28 37.73934205884586 40.0 36.0 41.0 33.0 41.0 29 37.72384690610473 40.0 36.0 41.0 33.0 41.0 30 37.626084549055335 40.0 36.0 41.0 33.0 41.0 31 37.49324152343698 40.0 36.0 41.0 33.0 41.0 32 37.33362805381775 40.0 36.0 41.0 32.0 41.0 33 37.180877999115836 40.0 36.0 41.0 31.0 41.0 34 36.96909900375545 40.0 36.0 41.0 31.0 41.0 35 36.80260872283325 40.0 35.0 41.0 30.0 41.0 36 36.61136638668221 39.0 35.0 41.0 30.0 41.0 37 36.54082101982218 39.0 35.0 41.0 30.0 41.0 38 36.42516555699939 39.0 35.0 41.0 30.0 41.0 39 36.40762522271491 39.0 35.0 41.0 30.0 41.0 40 36.27624686859485 39.0 35.0 41.0 29.0 41.0 41 36.1938814241251 39.0 35.0 41.0 29.0 41.0 42 36.14566783215222 39.0 35.0 41.0 28.0 41.0 43 36.09555641887819 39.0 35.0 41.0 28.0 41.0 44 35.922198257576774 39.0 35.0 41.0 28.0 41.0 45 35.84792869550462 39.0 35.0 40.0 27.0 41.0 46 35.73150070777571 39.0 35.0 40.0 27.0 41.0 47 35.625048561898 39.0 35.0 40.0 26.0 41.0 48 35.57332065142158 39.0 35.0 40.0 26.0 41.0 49 35.43786979606236 38.0 35.0 40.0 26.0 41.0 50 35.252727280846294 38.0 34.0 40.0 26.0 41.0 51 33.22212547054804 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 23.0 10 18.0 11 8.0 12 5.0 13 3.0 14 7.0 15 11.0 16 18.0 17 20.0 18 61.0 19 111.0 20 211.0 21 351.0 22 580.0 23 865.0 24 1423.0 25 1982.0 26 2728.0 27 3102.0 28 3182.0 29 3351.0 30 3943.0 31 4805.0 32 6292.0 33 8654.0 34 12651.0 35 16848.0 36 19824.0 37 33441.0 38 45713.0 39 53697.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.36984741516739 22.439839064753663 27.246462237821568 13.94385128225738 2 32.05040613375844 24.626129203674182 26.92360934353245 16.399855319034927 3 31.12114351547952 23.369548229221092 30.343706601292304 15.165601654007082 4 27.067843762419564 26.530202151459537 29.733277961605957 16.66867612451494 5 24.432328157863008 30.788020058854787 27.064271392911525 17.715380390370676 6 25.62014101928633 34.85069728187335 26.15421026073832 13.374951438102 7 61.87433297163092 27.44696147646032 7.318445483408577 3.360260068500185 8 85.28362381162896 3.952826860646331 8.155719586855465 2.607829740869247 9 77.65661491196342 8.742481278551047 9.844110725592902 3.7567930838926324 10 29.7730205723829 43.63247462501284 15.444246475634207 11.15025832697005 11 28.906720966683192 26.094819617667152 28.075251963686863 16.923207451962792 12 28.456155862481637 22.887278345635682 29.369342817974374 19.287222973908307 13 24.978454146404633 23.931749880548896 31.54000384029722 19.54979213274925 14 20.247743825382578 27.634064329443913 30.931361385364898 21.18683045980861 15 20.135214185879317 27.141523883522893 33.53472566434909 19.188536266248697 16 23.55575798982768 26.358281868885108 31.56233114972247 18.523628991564742 17 23.03240585689981 25.807690418458435 30.154817563554687 21.00508616108707 18 22.903800554610363 25.861275961079034 30.959047249052208 20.275876235258394 19 22.71580460924976 27.390696656708684 29.33495876145949 20.558539972582064 20 24.403302655610183 26.71953773538566 29.815442460290882 19.061717148713278 21 24.74982249789007 26.469471869822854 30.190987804823592 18.589717827463485 22 23.642834496586154 24.550662897816835 30.642446001402156 21.164056604194855 23 21.85575665018911 26.36453351552418 31.08050781232557 20.699202021961142 24 21.0073188920296 25.56789511523124 31.87134111216794 21.55344488057122 25 20.628647724177352 27.25717934634569 30.34504623985782 21.769126689619142 26 21.246221102879776 28.20742963548435 29.922166999343574 20.6241822622923 27 21.24488146431426 27.71533573575183 29.767662018120845 21.27212078181307 28 19.380551127305853 28.056943569958158 31.521695446568515 21.04080985616747 29 20.81932294666899 26.566372392728443 31.230100785474747 21.384203875127824 30 21.941493518382075 26.328809820443777 30.533488731406933 21.196207929767215 31 21.53736921778504 27.654605454115146 29.0862325344622 21.721792793637608 32 22.287566814473454 28.530282529773466 28.747750523575405 20.43440013217767 33 21.89549926096606 27.581371879200322 29.393009765965143 21.130119093868473 34 20.588905113400404 26.721323920139678 30.67950933504807 22.010261631411847 35 20.754127203147256 27.462144046869486 29.62432069161074 22.159408058372517 36 21.023394554815777 28.174385217534976 29.320669283427332 21.481550944221915 37 20.464318726807505 29.22689458384128 28.806694620458067 21.50209206889315 38 19.786461612656904 28.65352927780085 29.011659320981863 22.54834978856038 39 20.882285959248197 27.975672163650245 29.023716068071504 22.118325809030058 40 22.110734523825474 26.392665925399996 29.74086924681054 21.75573030396399 41 19.372066749724258 27.58539079489687 30.07220651868126 22.970335936697612 42 20.64472338696353 27.867161439843528 28.80535498189255 22.68276019130039 43 20.580867282007315 27.827418829066588 28.629862329810084 22.961851559116017 44 20.825128047119552 27.66576910882777 28.810713536154616 22.69838930789806 45 20.92828021666421 27.237084767862964 28.63477433788364 23.199860677589186 46 20.49736314475688 28.205196904541825 29.19652944302294 22.10091050767836 47 20.64293720220951 27.27950665577094 29.77436021094842 22.30319593107113 48 19.93248221629804 27.183945771430867 29.899839689918327 22.98373232235276 49 20.15664840292756 26.628442312930638 29.804278805578257 23.410630478563547 50 19.373406388289773 26.772230185629255 29.97307326483315 23.88129016124783 51 19.347060163167978 26.13992078270616 29.820354468364435 24.692664585761428 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 73.0 1 209.5 2 346.0 3 1966.5 4 3587.0 5 2475.5 6 1364.0 7 1146.5 8 929.0 9 878.0 10 827.0 11 808.5 12 790.0 13 773.0 14 756.0 15 746.0 16 736.0 17 708.0 18 680.0 19 724.5 20 769.0 21 889.0 22 1009.0 23 1125.5 24 1242.0 25 1568.0 26 2220.0 27 2546.0 28 3196.0 29 3846.0 30 4497.5 31 5149.0 32 5717.0 33 6285.0 34 7127.5 35 7970.0 36 8698.0 37 9426.0 38 10133.5 39 10841.0 40 11935.0 41 13029.0 42 13743.5 43 14458.0 44 15499.5 45 16541.0 46 17526.5 47 18512.0 48 18707.5 49 18903.0 50 17782.0 51 16661.0 52 15064.0 53 13467.0 54 12254.0 55 11041.0 56 10252.5 57 9464.0 58 9105.5 59 8747.0 60 8100.0 61 7453.0 62 6476.0 63 5499.0 64 4561.5 65 3624.0 66 2897.5 67 2171.0 68 1779.0 69 1387.0 70 1081.0 71 775.0 72 635.5 73 496.0 74 409.5 75 239.0 76 155.0 77 107.0 78 59.0 79 59.0 80 59.0 81 40.5 82 22.0 83 19.5 84 17.0 85 11.5 86 6.0 87 4.0 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 223941.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.0171090421427 #Duplication Level Percentage of deduplicated Percentage of total 1 65.6526363982366 30.867971644400367 2 12.690971028733683 11.933855374172909 3 6.881952431226561 9.707085236454548 4 4.254585970297827 8.001533299786535 5 2.7811536333665674 6.538090182147362 6 2.109933482254247 5.952178356408947 7 1.5265987997764443 5.024338356288528 8 1.1636438928316661 4.376893743639189 9 0.8216301733288051 3.4767607906543527 >10 2.098945958497045 12.441046207421627 >50 0.012962611603187566 0.4420961887650671 >100 0.003988495877903867 0.3797432798512241 >500 0.0 0.0 >1k 9.971239694759667E-4 0.8584073400093719 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1831 0.8176260711526696 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 327 0.14602060364113761 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04554771122751082 0.0 2 0.0 0.0 0.0 0.2505124117513095 0.0 3 0.0 0.0 0.0 0.38760209162234693 0.0 4 0.0 0.0 0.0 0.5322830566979696 0.0 5 0.0 0.0 0.0 0.9618604900397872 0.0 6 0.0 0.0 0.0 1.3128457942047236 0.0 7 0.0 0.0 0.0 1.6437365198869345 0.0 8 0.0 0.0 0.0 2.340348573954747 0.0 9 0.0 0.0 0.0 2.6422137973841324 0.0 10 0.0 0.0 0.0 3.250856252316458 0.0 11 0.0 0.0 0.0 3.91531698081191 0.0 12 0.0 0.0 0.0 4.511009596277591 0.0 13 0.0 0.0 0.0 4.752144538070295 0.0 14 0.0 0.0 0.0 4.8615483542540225 0.0 15 0.0 0.0 0.0 5.049990845803135 0.0 16 0.0 0.0 0.0 5.421070728450798 0.0 17 0.0 0.0 0.0 5.908699166298266 0.0 18 0.0 0.0 0.0 6.39677415033424 0.0 19 0.0 0.0 0.0 6.688815357616515 0.0 20 0.0 0.0 0.0 7.017919898544706 0.0 21 0.0 0.0 0.0 7.410880544429113 0.0 22 0.0 0.0 0.0 7.856980186745616 0.0 23 0.0 0.0 0.0 8.264676856850688 0.0 24 0.0 0.0 0.0 8.61253633769609 0.0 25 0.0 0.0 0.0 8.929584131534645 0.0 26 0.0 0.0 0.0 9.20554967603074 0.0 27 0.0 0.0 0.0 9.479729035772815 0.0 28 0.0 0.0 0.0 9.780254620636686 0.0 29 0.0 0.0 0.0 10.089711129270656 0.0 30 0.0 0.0 0.0 10.471954666630943 0.0 31 0.0 0.0 0.0 10.80775740038671 0.0 32 0.0 0.0 0.0 11.139094672257425 0.0 33 0.0 0.0 0.0 11.4489977270799 0.0 34 0.0 0.0 0.0 11.801769215998856 0.0 35 0.0 0.0 0.0 12.176421468154558 0.0 36 0.0 0.0 0.0 12.54928753555624 0.0 37 0.0 0.0 0.0 12.89000227738556 0.0 38 0.0 0.0 0.0 13.228930834460863 0.0 39 0.0 0.0 0.0 13.605815817559089 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGAT 20 7.021109E-4 45.000004 4 CGACAAT 20 7.021109E-4 45.000004 20 AAACGCG 20 7.021109E-4 45.000004 1 GCGATCA 20 7.021109E-4 45.000004 9 GCGATAT 20 7.021109E-4 45.000004 9 GCGATAG 40 6.7720975E-9 45.000004 9 TTACGAG 20 7.021109E-4 45.000004 1 GGCGCTA 20 7.021109E-4 45.000004 1 TGCAACG 20 7.021109E-4 45.000004 2 CTACGAA 25 3.8807164E-5 45.0 11 AAGGGCG 70 0.0 45.0 5 GCTACGA 25 3.8807164E-5 45.0 10 CGTTTTA 105 0.0 42.857143 1 CGTTTTT 805 0.0 42.20497 1 GGCGATA 80 0.0 42.187504 8 CGGTTTT 100 0.0 40.5 1 GTAAGGA 90 0.0 40.0 4 CGCATGG 40 3.441619E-7 39.375004 2 TAACGGG 75 0.0 39.0 3 CGGGAAT 75 0.0 39.0 6 >>END_MODULE