SRR2936382.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936382.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97705
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	366	0.37459700117701245	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	167	0.1709226754004401	No Hit
CCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC	108	0.1105368200194463	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	35	1.1967313E-7	45.000004	25
CTCACGA	35	1.1967313E-7	45.000004	24
GTACCAC	35	1.1967313E-7	45.000004	27
GTCTCAC	35	1.1967313E-7	45.000004	22
TCTCACG	35	1.1967313E-7	45.000004	23
TTGATAT	20	7.001604E-4	45.0	32
TGATATA	20	7.001604E-4	45.0	33
CGCATGG	20	7.001604E-4	45.0	2
TGGGTAT	20	7.001604E-4	45.0	6
GTCTAAA	20	7.001604E-4	45.0	33
TACGGCT	20	7.001604E-4	45.0	15
TCCTAGT	20	7.001604E-4	45.0	42
AATGCGG	25	3.864568E-5	45.0	2
GGGACGA	20	7.001604E-4	45.0	7
CATAGCG	20	7.001604E-4	45.0	1
CTACGGG	20	7.001604E-4	45.0	3
GGGTTTA	20	7.001604E-4	45.0	8
GGTTGTC	20	7.001604E-4	45.0	8
CGTAAAG	20	7.001604E-4	45.0	2
ACATACG	20	7.001604E-4	45.0	17