##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 223093 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.994258000026896 33.0 31.0 34.0 30.0 34.0 2 32.12718910947452 33.0 31.0 34.0 30.0 34.0 3 31.33423729117453 33.0 31.0 34.0 28.0 34.0 4 35.42056003550089 37.0 35.0 37.0 33.0 37.0 5 35.750749687350115 37.0 35.0 37.0 35.0 37.0 6 35.822580717458635 37.0 35.0 37.0 35.0 37.0 7 26.987144374767475 36.0 11.0 37.0 0.0 37.0 8 31.32704298207474 37.0 21.0 37.0 17.0 37.0 9 36.16340718893018 39.0 32.0 39.0 32.0 39.0 10 36.93288449211764 38.0 37.0 39.0 34.0 39.0 11 37.405431815431236 39.0 37.0 39.0 35.0 39.0 12 37.46543818048975 39.0 37.0 39.0 35.0 39.0 13 37.47182565118583 39.0 37.0 39.0 35.0 39.0 14 38.699219607966185 40.0 38.0 41.0 35.0 41.0 15 38.788074928393094 40.0 38.0 41.0 35.0 41.0 16 38.72569287247919 40.0 38.0 41.0 35.0 41.0 17 38.656694741654825 40.0 38.0 41.0 35.0 41.0 18 38.42972661625421 40.0 38.0 41.0 34.0 41.0 19 38.17750893125289 40.0 37.0 41.0 34.0 41.0 20 38.03175805605734 40.0 36.0 41.0 34.0 41.0 21 37.97821536309969 40.0 36.0 41.0 34.0 41.0 22 37.941235269596085 40.0 36.0 41.0 34.0 41.0 23 37.86139412711291 40.0 35.0 41.0 34.0 41.0 24 37.77793117668416 40.0 35.0 41.0 33.0 41.0 25 37.674261406677935 39.0 35.0 41.0 33.0 41.0 26 37.59893407681998 39.0 35.0 41.0 33.0 41.0 27 37.49473089698019 39.0 35.0 41.0 33.0 41.0 28 37.4252845225982 39.0 35.0 41.0 33.0 41.0 29 37.399788429040804 39.0 35.0 41.0 33.0 41.0 30 37.25179185362158 39.0 35.0 41.0 33.0 41.0 31 37.05701209809362 39.0 35.0 41.0 32.0 41.0 32 36.77391491440789 39.0 35.0 41.0 31.0 41.0 33 36.4261317029221 39.0 35.0 41.0 30.0 41.0 34 35.96803575190616 39.0 35.0 41.0 27.0 41.0 35 35.600211570959196 39.0 35.0 41.0 24.0 41.0 36 35.28180175980421 39.0 35.0 41.0 23.0 41.0 37 35.08716544221468 39.0 35.0 41.0 22.0 41.0 38 34.86809536829932 39.0 35.0 41.0 20.0 41.0 39 34.73400330803746 39.0 34.0 41.0 19.0 41.0 40 34.55700537444026 39.0 34.0 40.0 18.0 41.0 41 34.43288225089985 38.0 34.0 40.0 18.0 41.0 42 34.32574307575764 38.0 34.0 40.0 17.0 41.0 43 34.26993227039844 38.0 34.0 40.0 17.0 41.0 44 34.0362091145845 38.0 33.0 40.0 15.0 41.0 45 33.94242311502378 38.0 33.0 40.0 15.0 41.0 46 33.86693889992066 38.0 33.0 40.0 15.0 41.0 47 33.72968672257758 38.0 33.0 40.0 15.0 41.0 48 33.63392396892775 38.0 33.0 40.0 15.0 41.0 49 33.52252199755259 38.0 33.0 40.0 15.0 41.0 50 33.322340907155315 37.0 33.0 40.0 13.0 41.0 51 31.5171161802477 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 19.0 11 6.0 12 11.0 13 7.0 14 10.0 15 13.0 16 19.0 17 48.0 18 89.0 19 149.0 20 262.0 21 499.0 22 812.0 23 1329.0 24 2382.0 25 3904.0 26 5097.0 27 5572.0 28 5185.0 29 4677.0 30 4737.0 31 5257.0 32 6451.0 33 8525.0 34 12171.0 35 16060.0 36 18876.0 37 31512.0 38 41939.0 39 47455.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.119434495927706 19.66085892430511 24.210979277700332 21.008727302066852 2 39.29482323515305 22.17371230831985 23.927241105727205 14.604223350799892 3 29.359504780517543 21.004693110048276 35.18532629889777 14.450475810536412 4 25.14780831312502 23.400554925524332 35.13467477688677 16.31696198446388 5 23.019996145105402 27.333443900077548 33.34394176419699 16.302618190620056 6 24.11102096435119 31.10496519388775 31.993832168647156 12.790181673113905 7 56.738221279914654 26.82423921862183 13.42534279426069 3.012196707202826 8 78.51658277041413 3.7128013877620547 15.494435056232152 2.276180785591659 9 71.38637249936124 7.651069285006701 17.26903130084763 3.6935269147844174 10 28.250998462524596 38.77351597764161 22.379904344824805 10.595581215008988 11 28.229931015316485 22.526479988166372 33.44390007754613 15.799688918971011 12 26.036675287884425 20.940146037751074 35.2458391791764 17.777339495188105 13 23.929930567072923 20.63937461058841 37.21138717933776 18.2193076430009 14 19.741542764676616 23.137884200759324 37.25621153509971 19.86436149946435 15 19.081728247860756 23.691913237976987 38.72824337832205 18.49811513584021 16 23.355730569762386 24.33245328181521 35.60533051238721 16.706485636035197 17 23.101576472592146 23.3629024666843 35.25390756321355 18.28161349751001 18 23.08319848672975 22.977413007131556 36.082709901251945 17.856678604886753 19 22.277256570129946 24.36158911306047 34.777872905021674 18.583281411787908 20 22.339562424639052 25.036643910835394 35.04726728315097 17.57652638137458 21 23.053166168369245 23.709394736724146 36.23107851882399 17.00636057608262 22 23.11681675355121 22.042825189494963 36.42292676148512 18.417431295468706 23 20.24357554921042 23.89138162111765 36.605361889436246 19.259680940235686 24 19.513835037405926 24.120434079061198 36.693217626729655 19.672513256803217 25 20.88232261881816 25.322623300596614 35.01320077277189 18.781853307813336 26 20.236403652288505 25.207872949846028 34.75232302223736 19.8034003756281 27 19.81236524678049 24.161224242804572 36.24407758199496 19.782332928419986 28 18.820850497326227 24.991371311515824 36.68470099913489 19.503077192023056 29 20.342637375444323 24.138363821365978 36.039678519720475 19.479320283469225 30 21.49820926698731 23.388452349468608 36.139636833069616 18.973701550474466 31 21.679747907823195 23.803077640266615 35.389725361172246 19.127449090737944 32 21.66854181888271 24.507716512844418 35.190705221589205 18.633036446683672 33 21.773879054923285 24.37951885536525 34.873797026352236 18.97280506335923 34 20.43587203542917 24.934444379698153 35.47354690644709 19.15613667842559 35 20.955834562267754 25.800002689461344 33.73705136422927 19.507111384041632 36 21.89580130259578 26.50643453626963 32.41025043367564 19.187513727458953 37 21.348944162300025 27.413231253333812 31.86563451116799 19.372190073198173 38 21.107340884743135 27.406059356411898 32.1238228003568 19.362776958488165 39 21.275432218850433 26.78165608064798 31.3985647241285 20.54434697637308 40 22.201503408892258 26.14290901104024 32.247089778702154 19.40849780136535 41 20.56362144935072 26.289932897939423 31.970075260093324 21.17637039261653 42 21.22881488885801 26.25990057957892 32.03955301152434 20.471731520038727 43 21.179508097519868 26.43561205416575 32.28115628908124 20.103723559233146 44 21.32966968932239 26.778518375744643 31.46624950132904 20.425562433603922 45 21.17861161040463 26.02995163452013 31.363153483076566 21.428283271998673 46 20.85811746670671 27.129044837803068 31.104068706772516 20.90876898871771 47 20.672992877409868 26.80451650208657 32.18568041130829 20.33681020919527 48 20.526865477625922 26.52750198347774 32.52948322000242 20.416149318893915 49 20.958972267171088 26.274244373422746 32.0108654238367 20.75591793556947 50 20.084897329813128 26.42306123455241 32.962038253105206 20.530003182529256 51 20.297813019682376 25.137946954857394 32.74239890987167 21.821841115588565 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 84.0 1 201.0 2 318.0 3 4817.0 4 9316.0 5 6398.5 6 3481.0 7 2992.5 8 2504.0 9 2423.5 10 2343.0 11 2231.0 12 2119.0 13 1961.0 14 1803.0 15 1695.0 16 1587.0 17 1534.0 18 1481.0 19 1392.0 20 1303.0 21 1337.5 22 1372.0 23 1485.5 24 1599.0 25 1802.5 26 2237.5 27 2469.0 28 2837.0 29 3205.0 30 3797.0 31 4389.0 32 5023.5 33 5658.0 34 6353.5 35 7049.0 36 7726.5 37 8404.0 38 8884.5 39 9365.0 40 10242.0 41 11119.0 42 11574.5 43 12030.0 44 12889.5 45 13749.0 46 14634.5 47 15520.0 48 15768.0 49 16016.0 50 15647.5 51 15279.0 52 14403.0 53 13527.0 54 12607.0 55 11687.0 56 10898.0 57 10109.0 58 9176.5 59 8244.0 60 7573.5 61 6903.0 62 6260.5 63 5618.0 64 4866.0 65 4114.0 66 3380.0 67 2646.0 68 2179.0 69 1712.0 70 1448.0 71 1184.0 72 921.5 73 659.0 74 576.5 75 385.5 76 277.0 77 219.0 78 161.0 79 125.5 80 90.0 81 65.0 82 40.0 83 33.0 84 26.0 85 19.0 86 12.0 87 9.0 88 6.0 89 6.0 90 6.0 91 6.0 92 6.0 93 5.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 223093.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.37512487478651 #Duplication Level Percentage of deduplicated Percentage of total 1 64.08393751197234 32.92320292145593 2 16.281299951502927 16.729076362646367 3 8.018532147315868 12.35859271142528 4 4.391895372915245 9.025366928820711 5 2.7880829082549883 7.161905378642898 6 1.5967278972390888 4.921925706702809 7 1.0331926817853758 3.715628213250747 8 0.6542728715010919 2.689068038044299 9 0.4250157931296987 1.9651715501215232 >10 0.7053988681713004 4.6611538673737645 >50 0.014757270144609674 0.49431810091166306 >100 0.004919090048203225 0.5393020589700864 >500 9.838180096406449E-4 0.41951331672462194 >1k 9.838180096406449E-4 2.3957748449092873 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4740 2.124674463116279 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 830 0.37204215282415853 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 438 0.19633067823732706 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04706557355004415 0.0 2 0.0 0.0 0.0 0.14298969488061034 0.0 3 0.0 0.0 0.0 0.25460234072785787 0.0 4 0.0 0.0 0.0 0.3527676798465214 0.0 5 0.0 0.0 0.0 0.6566768119125208 0.0 6 0.0 0.0 0.0 1.0430627585805023 0.0 7 0.0 0.0 0.0 1.3353175581483956 0.0 8 0.0 0.0 0.0 1.890243082481297 0.0 9 0.0 0.0 0.0 2.284697413186429 0.0 10 0.0 0.0 0.0 2.8118318369469235 0.0 11 0.0 0.0 0.0 3.2600753945663916 0.0 12 0.0 0.0 0.0 3.6191184842195856 0.0 13 0.0 0.0 0.0 3.8212763287059657 0.0 14 0.0 0.0 0.0 3.9727826511813458 0.0 15 0.0 0.0 0.0 4.088429489047169 0.0 16 0.0 0.0 0.0 4.246211221329221 0.0 17 0.0 0.0 0.0 4.455540962737513 0.0 18 0.0 0.0 0.0 4.69445477894869 0.0 19 0.0 0.0 0.0 4.831169064022627 0.0 20 0.0 0.0 0.0 4.991640257650397 0.0 21 0.0 0.0 0.0 5.1570421304119805 0.0 22 0.0 0.0 0.0 5.350235103745971 0.0 23 0.0 0.0 0.0 5.543428077079962 0.0 24 0.0 0.0 0.0 5.705692244938209 0.0 25 0.0 0.0 0.0 5.852716131837395 0.0 26 0.0 0.0 0.0 5.993016365372289 0.0 27 0.0 0.0 0.0 6.171865544862457 0.0 28 0.0 0.0 0.0 6.33726741762404 0.0 29 0.0 0.0 0.0 6.515220109998969 0.0 30 0.0 0.0 0.0 6.745169055057756 0.0 31 0.0 0.0 0.0 6.930741887912216 0.0 32 0.0 0.0 0.0 7.133796219513835 0.0 33 0.0 0.0 0.0 7.322506757271631 0.0 34 0.0 0.0 0.0 7.529595280891825 0.0 35 0.0 0.0 0.0 7.719202305764861 0.0 36 0.0 0.0 0.0 7.911498791983612 0.0 37 0.0 0.0 0.0 8.098416355510931 0.0 38 0.0 0.0 0.0 8.330606518357815 0.0 39 0.0 0.0 0.0 8.668582160802893 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTCG 30 2.1576125E-6 45.000004 30 GTTAGCG 20 7.02105E-4 45.000004 1 CACGACG 40 6.7720975E-9 45.000004 26 TAACGAA 20 7.02105E-4 45.000004 1 CTGCGAC 20 7.02105E-4 45.000004 44 TGCGACA 20 7.02105E-4 45.000004 45 CGAGGGC 20 7.02105E-4 45.000004 4 GCGGGTA 20 7.02105E-4 45.000004 5 TCCGTGG 20 7.02105E-4 45.000004 36 CCGGTCG 30 2.1576125E-6 45.000004 16 CGCACGG 20 7.02105E-4 45.000004 2 TACACGG 20 7.02105E-4 45.000004 2 TAATCGT 20 7.02105E-4 45.000004 21 GCGGGCG 35 1.2060445E-7 45.0 5 CGTTTTA 420 0.0 43.92857 1 CGTTTTT 2040 0.0 43.89706 1 CGGTTTT 120 0.0 43.125004 1 ACAACGA 50 1.0732037E-9 40.5 13 CAACGAG 50 1.0732037E-9 40.5 14 GGATTAC 50 1.0732037E-9 40.5 8 >>END_MODULE