SRR2936378.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936378.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	116796
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCG	1363	1.1669920202746669	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGC	1175	1.0060276036850577	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC	882	0.7551628480427411	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	355	0.303948765368677	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGC	304	0.2602828864002192	No Hit
GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	290	0.2482961745265249	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCG	287	0.24572759341073325	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCT	247	0.2114798452001781	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTT	166	0.14212815507380389	No Hit
CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGCT	158	0.13527860543169287	No Hit
GAATCTATCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC	152	0.1301414432001096	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTC	151	0.1292852494948457	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGCCTTCGTA	142	0.12157950614747082	No Hit
CCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	126	0.10788040686324873	No Hit
TCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	117	0.10017466351587383	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGTCTC	30	2.148725E-6	45.000004	7
AAACGGC	30	2.148725E-6	45.000004	6
AGGGGTC	30	2.148725E-6	45.000004	6
AAGGACC	30	2.148725E-6	45.000004	6
TCACGAC	20	7.007247E-4	45.0	25
AAATAAG	20	7.007247E-4	45.0	2
CAACGCA	25	3.869237E-5	45.0	17
CGACGGT	20	7.007247E-4	45.0	28
TTATGGG	40	6.724804E-9	45.0	3
AGGACTA	25	3.869237E-5	45.0	7
GTCTCAC	25	3.869237E-5	45.0	22
GTTAGGA	35	1.1994234E-7	45.0	4
ATCAACG	25	3.869237E-5	45.0	15
ATCCGGG	20	7.007247E-4	45.0	3
GGCTTAG	35	1.1994234E-7	45.0	1
GTTGTCA	20	7.007247E-4	45.0	34
CAAGGAT	45	3.783498E-10	45.0	5
CGGGCTC	20	7.007247E-4	45.0	6
AACGCAA	25	3.869237E-5	45.0	18
GACGGTC	20	7.007247E-4	45.0	29