##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936378.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 116796 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78790369533203 31.0 31.0 34.0 30.0 34.0 2 31.907471146272133 33.0 31.0 34.0 30.0 34.0 3 31.785086818041712 33.0 31.0 34.0 30.0 34.0 4 35.57508818795164 37.0 35.0 37.0 33.0 37.0 5 35.663943970683924 37.0 35.0 37.0 35.0 37.0 6 35.64640056166307 37.0 35.0 37.0 33.0 37.0 7 26.988655433405253 35.0 18.0 37.0 0.0 37.0 8 31.173028185896776 35.0 23.0 37.0 17.0 37.0 9 35.84925853625124 39.0 32.0 39.0 32.0 39.0 10 36.49550498304736 37.0 35.0 39.0 32.0 39.0 11 36.85783759717798 39.0 37.0 39.0 33.0 39.0 12 36.93802013767595 39.0 37.0 39.0 33.0 39.0 13 36.86758108154389 39.0 37.0 39.0 33.0 39.0 14 38.06557587588616 40.0 37.0 41.0 33.0 41.0 15 38.10071406555019 40.0 37.0 41.0 33.0 41.0 16 38.08496010137333 40.0 37.0 41.0 33.0 41.0 17 37.912642556251924 40.0 37.0 41.0 33.0 41.0 18 37.81991677797185 40.0 36.0 41.0 33.0 41.0 19 37.69294325148122 39.0 36.0 41.0 33.0 41.0 20 37.7999674646392 39.0 36.0 41.0 33.0 41.0 21 37.810378780095206 39.0 36.0 41.0 33.0 41.0 22 37.8617760882222 39.0 36.0 41.0 33.0 41.0 23 37.85627076269735 39.0 36.0 41.0 33.0 41.0 24 37.78810061988424 39.0 36.0 41.0 33.0 41.0 25 37.735881365800196 39.0 36.0 41.0 33.0 41.0 26 37.545986163909724 39.0 36.0 41.0 33.0 41.0 27 37.4977396486181 39.0 36.0 41.0 33.0 41.0 28 37.486754683379566 39.0 36.0 41.0 33.0 41.0 29 37.48967430391452 39.0 36.0 41.0 33.0 41.0 30 37.44298606116648 39.0 36.0 41.0 33.0 41.0 31 37.32857289633207 39.0 36.0 41.0 32.0 41.0 32 37.216959484913865 39.0 36.0 41.0 32.0 41.0 33 37.15134936127949 39.0 36.0 41.0 32.0 41.0 34 37.03058323915202 39.0 35.0 41.0 31.0 41.0 35 37.02151614781328 39.0 35.0 41.0 31.0 41.0 36 36.804530977088255 39.0 35.0 41.0 31.0 41.0 37 36.752928182472004 39.0 35.0 41.0 30.0 41.0 38 36.60473817596493 39.0 35.0 41.0 30.0 41.0 39 36.57816192335354 39.0 35.0 40.0 30.0 41.0 40 36.429227028322885 39.0 35.0 40.0 30.0 41.0 41 36.291080173978564 39.0 35.0 40.0 30.0 41.0 42 36.226394739545874 39.0 35.0 40.0 30.0 41.0 43 36.127307442035686 39.0 35.0 40.0 29.0 41.0 44 35.930280146580365 39.0 35.0 40.0 29.0 41.0 45 35.840842152128495 38.0 35.0 40.0 28.0 41.0 46 35.57019075995753 38.0 35.0 40.0 27.0 41.0 47 35.34193808007124 38.0 34.0 40.0 26.0 41.0 48 35.17206068700983 38.0 34.0 40.0 24.0 41.0 49 34.9553837460187 38.0 34.0 40.0 24.0 41.0 50 34.75897291003117 38.0 34.0 40.0 23.0 41.0 51 32.281559299976024 36.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 5.0 11 5.0 12 5.0 13 2.0 14 3.0 15 2.0 16 3.0 17 17.0 18 29.0 19 44.0 20 116.0 21 176.0 22 274.0 23 382.0 24 597.0 25 880.0 26 1147.0 27 1420.0 28 1655.0 29 2013.0 30 2488.0 31 3309.0 32 4224.0 33 5535.0 34 7933.0 35 10144.0 36 11097.0 37 16991.0 38 22007.0 39 24282.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.08705777595123 20.838042398712282 27.72183978903387 9.353060036302614 2 27.976129319497247 29.464193979245863 26.119901366485156 16.43977533477174 3 28.03263810404466 28.391383266550225 28.77410185280318 14.801876776601938 4 25.53597725949519 25.670399671221617 32.612418233501145 16.181204835782047 5 27.042021987054348 29.03010377067708 25.799684920716466 18.128189321552107 6 24.31932600431522 36.76752628514675 25.744888523579572 13.168259186958458 7 60.567142710366795 26.48549607863283 9.037980752765504 3.9093804582348715 8 81.50107880406863 6.691153806637214 7.498544470701052 4.309222918593102 9 76.1687044076852 6.488235898489675 8.701496626596802 8.64156306722833 10 35.281174012808656 35.84112469605124 15.91664098085551 12.9610603102846 11 25.896434809411282 25.561663070653108 29.70564060413028 18.836261515805337 12 25.835645056337547 23.32870988732491 30.655159423267918 20.180485633069626 13 21.10175005993356 26.76033425802253 34.80341792527141 17.334497756772492 14 18.742936401931573 31.0395903969314 28.60885646768725 21.608616733449775 15 15.572451111339431 26.891331894927912 38.980787013253874 18.55542998047878 16 19.018630775026544 27.020617144422754 31.06356382067879 22.897188259871914 17 19.284907017363608 25.88444809753759 31.794753244974146 23.03589164012466 18 19.498099249974317 26.20980170553786 33.695503270659955 20.59659577382787 19 19.553751840816467 28.536936196445083 29.618308846193365 22.291003116545088 20 20.317476625911844 28.46501592520292 32.751121613753895 18.46638583513134 21 19.507517380732217 30.49162642556252 31.85211822322682 18.14873797047844 22 19.002363094626528 24.85701565122093 31.038734203226138 25.101887050926404 23 16.087879721908287 29.96249871570944 31.733107298195147 22.21651426418713 24 18.873934038836946 25.620740436316314 32.18089660604815 23.32442891879859 25 16.16408096167677 32.54991609301688 28.967601630192814 22.31840131511353 26 16.47916024521388 30.209082502825442 29.72790164046714 23.583855611493547 27 19.409911298332137 29.392273708003696 29.53354566937224 21.664269324291926 28 15.069009212644268 28.388814685434433 34.42155553272372 22.120620569197573 29 18.602520634268295 26.668721531559296 31.791328470153086 22.937429364019316 30 20.886845439912328 28.98044453577177 30.650022261036337 19.482687763279564 31 19.724990581869243 30.774170348299602 26.749203739854106 22.751635329977056 32 20.877427309154424 29.666255693688143 28.649953765539916 20.80636323161752 33 21.04010411315456 26.698688311243536 28.5934449809925 23.667762594609403 34 17.96551251755197 28.068598239665743 29.693653892256584 24.272235350525705 35 18.983526833110723 25.925545395390255 28.585739237645125 26.5051885338539 36 20.743004897427994 29.280112332614134 29.04894003219288 20.927942737764994 37 18.037432788794135 27.957293057981435 33.576492345628274 20.42878180759615 38 18.878215007363266 28.602863111750406 29.722764478235558 22.796157402650778 39 19.41247987944793 25.357888968800303 32.57388951676427 22.6557416349875 40 20.68478372547005 25.386999554779273 29.636288914003906 24.29192780574677 41 17.20178773245659 25.833076475221755 29.662830918867083 27.30230487345457 42 18.04171375732046 25.315079283537106 32.027637932805916 24.615569026336516 43 19.73184013151135 26.630192814822422 31.01304839206822 22.624918661598002 44 19.72927155039556 26.11476420425357 30.19367101613069 23.96229322922018 45 18.567416692352477 26.055686838590365 28.913661426761188 26.463235042295967 46 22.047844104250146 28.03349429774992 28.066885852255215 21.851775745744717 47 16.396965649508545 25.99917805404295 34.71009281139765 22.893763485050858 48 19.277201274016235 25.90242816534813 30.938559539710266 23.881811020925376 49 18.743792595636837 23.31158601321963 33.936949895544366 24.007671495599165 50 19.293468954416245 23.281619233535395 32.18774615569026 25.237165656358094 51 18.769478406794754 23.37323195999863 29.084043974108702 28.773245659097913 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65.0 1 110.0 2 155.0 3 410.5 4 666.0 5 461.5 6 257.0 7 238.0 8 219.0 9 227.5 10 236.0 11 247.5 12 259.0 13 245.5 14 232.0 15 237.5 16 243.0 17 284.5 18 326.0 19 359.0 20 392.0 21 444.5 22 497.0 23 627.0 24 757.0 25 883.0 26 1279.0 27 1549.0 28 1781.0 29 2013.0 30 2573.0 31 3133.0 32 3465.0 33 3797.0 34 4198.5 35 4600.0 36 4931.5 37 5263.0 38 5648.0 39 6033.0 40 6501.5 41 6970.0 42 7776.5 43 8583.0 44 9557.5 45 10532.0 46 13427.0 47 16322.0 48 14317.5 49 12313.0 50 11286.5 51 10260.0 52 8437.5 53 6615.0 54 5497.5 55 4380.0 56 3673.5 57 2967.0 58 2487.5 59 2008.0 60 1737.0 61 1466.0 62 1220.5 63 975.0 64 828.5 65 682.0 66 551.5 67 421.0 68 332.5 69 244.0 70 199.0 71 154.0 72 125.0 73 96.0 74 66.5 75 28.5 76 20.0 77 22.5 78 25.0 79 16.5 80 8.0 81 5.0 82 2.0 83 3.5 84 5.0 85 4.0 86 3.0 87 2.5 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 116796.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.5412171649714 #Duplication Level Percentage of deduplicated Percentage of total 1 76.35206447692455 40.87982465152916 2 9.697124764128315 10.383917257440324 3 4.2648799053315 6.850405835816295 4 2.5841941983560943 5.534436110825713 5 1.7750343812965745 4.751875064214528 6 1.31928231042313 4.238158841056201 7 0.9674736943102952 3.625980341792527 8 0.7435954840566732 3.1850405835816296 9 0.5469024850481339 2.635364224802219 >10 1.707870918220488 12.199904106305011 >50 0.014392170659161416 0.46063221343196686 >100 0.0223878210253622 2.326278297201959 >500 0.0015991300732401573 0.7551628480427411 >1k 0.0031982601464803145 2.1730196239597244 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCG 1363 1.1669920202746669 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGC 1175 1.0060276036850577 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC 882 0.7551628480427411 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 355 0.303948765368677 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGC 304 0.2602828864002192 No Hit GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 290 0.2482961745265249 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCG 287 0.24572759341073325 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCT 247 0.2114798452001781 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTT 166 0.14212815507380389 No Hit CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGCT 158 0.13527860543169287 No Hit GAATCTATCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC 152 0.1301414432001096 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTC 151 0.1292852494948457 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGCCTTCGTA 142 0.12157950614747082 No Hit CCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 126 0.10788040686324873 No Hit TCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 117 0.10017466351587383 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2268913318949279 0.0 2 0.0 0.0 0.0 1.1318880783588479 0.0 3 0.0 0.0 0.0 1.406726257748553 0.0 4 0.0 0.0 0.0 1.8716394397068392 0.0 5 0.0 0.0 0.0 3.7980752765505668 0.0 6 0.0 0.0 0.0 4.3640193157299905 0.0 7 0.0 0.0 0.0 5.144011781225385 0.0 8 0.0 0.0 0.0 6.50279119147916 0.0 9 0.0 0.0 0.0 6.9171889448268775 0.0 10 0.0 0.0 0.0 9.663002157608137 0.0 11 0.0 0.0 0.0 11.38309531148327 0.0 12 0.0 0.0 0.0 14.110928456453989 0.0 13 0.0 0.0 0.0 14.752217541696634 0.0 14 0.0 0.0 0.0 14.982533648412616 0.0 15 0.0 0.0 0.0 15.503955614918318 0.0 16 0.0 0.0 0.0 16.44405630329806 0.0 17 0.0 0.0 0.0 17.59049967464639 0.0 18 0.0 0.0 0.0 18.766053631973698 0.0 19 0.0 0.0 0.0 19.468988663995344 0.0 20 0.0 0.0 0.0 20.201890475701223 0.0 21 0.0 0.0 0.0 21.041816500565087 0.0 22 0.0 0.0 0.0 22.02215829309223 0.0 23 0.0 0.0 0.0 22.985376211514094 0.0 24 0.0 0.0 0.0 23.656632076440975 0.0 25 0.0 0.0 0.0 24.27651631905202 0.0 26 0.0 0.0 0.0 24.860440426041986 0.0 27 0.0 0.0 0.0 25.45463885749512 0.0 28 0.0 0.0 0.0 26.05054967635878 0.0 29 0.0 0.0 0.0 26.645604301517174 0.0 30 0.0 0.0 0.0 27.35025172094935 0.0 31 0.0 0.0 0.0 28.0197951984657 0.0 32 0.0 0.0 0.0 28.62854892290832 0.0 33 0.0 0.0 0.0 29.19620534949827 0.0 34 0.0 0.0 0.0 29.756156032740847 0.0 35 0.0 0.0 0.0 30.405150861330867 0.0 36 0.0 0.0 0.0 30.978800643857667 0.0 37 0.0 0.0 0.0 31.591835336826605 0.0 38 0.0 0.0 0.0 32.1963080927429 0.0 39 0.0 0.0 0.0 32.814479947943425 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGTCTC 30 2.148725E-6 45.000004 7 AAACGGC 30 2.148725E-6 45.000004 6 AGGGGTC 30 2.148725E-6 45.000004 6 AAGGACC 30 2.148725E-6 45.000004 6 TCACGAC 20 7.007247E-4 45.0 25 AAATAAG 20 7.007247E-4 45.0 2 CAACGCA 25 3.869237E-5 45.0 17 CGACGGT 20 7.007247E-4 45.0 28 TTATGGG 40 6.724804E-9 45.0 3 AGGACTA 25 3.869237E-5 45.0 7 GTCTCAC 25 3.869237E-5 45.0 22 GTTAGGA 35 1.1994234E-7 45.0 4 ATCAACG 25 3.869237E-5 45.0 15 ATCCGGG 20 7.007247E-4 45.0 3 GGCTTAG 35 1.1994234E-7 45.0 1 GTTGTCA 20 7.007247E-4 45.0 34 CAAGGAT 45 3.783498E-10 45.0 5 CGGGCTC 20 7.007247E-4 45.0 6 AACGCAA 25 3.869237E-5 45.0 18 GACGGTC 20 7.007247E-4 45.0 29 >>END_MODULE