SRR2936370.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936370.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	68514
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	258	0.3765653735003065	No Hit
GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	169	0.2466649151998132	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG	109	0.1590915725253233	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC	87	0.12698134687801033	No Hit
GGGTAAGGGACACTTCTGTTGTTAACTGTTCTAATTTTTTTTTGTCTATGT	86	0.12552179116676881	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC	85	0.12406223545552734	No Hit
TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	84	0.12260267974428583	No Hit
CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	78	0.11384534547683686	No Hit
CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT	74	0.10800712263187084	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTGGT	20	6.986876E-4	45.000004	7
CAAGTGG	20	6.986876E-4	45.000004	12
GCTTGGG	20	6.986876E-4	45.000004	3
CCATGGG	20	6.986876E-4	45.000004	3
CAAGGAT	20	6.986876E-4	45.000004	5
TGGGCAC	20	6.986876E-4	45.000004	6
GGATTCC	20	6.986876E-4	45.000004	8
TGGGACC	40	6.6556822E-9	45.000004	6
AAAGGAT	20	6.986876E-4	45.000004	5
CGTTTGG	20	6.986876E-4	45.000004	2
TCGAACG	20	6.986876E-4	45.000004	1
TTGGGCA	20	6.986876E-4	45.000004	5
CGAACGG	25	3.8523904E-5	45.0	2
GGATCTA	25	3.8523904E-5	45.0	8
CGTCTCT	85	0.0	45.0	35
TAACGTC	85	0.0	45.0	32
ACGTCTC	85	0.0	45.0	34
TTACAGG	25	3.8523904E-5	45.0	2
ATGGGAC	30	2.1356427E-6	44.999996	5
ATCTCTT	30	2.1356427E-6	44.999996	7