##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936369.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 197179 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.892686340837514 31.0 31.0 34.0 30.0 34.0 2 32.00752615643654 33.0 31.0 34.0 30.0 34.0 3 31.723849902880126 33.0 31.0 34.0 30.0 34.0 4 35.5797371931088 37.0 35.0 37.0 33.0 37.0 5 35.71603466900633 37.0 35.0 37.0 35.0 37.0 6 35.70459328833192 37.0 35.0 37.0 35.0 37.0 7 26.938477221205098 35.0 16.0 37.0 0.0 37.0 8 31.17898964899913 35.0 21.0 37.0 17.0 37.0 9 35.92026027112421 39.0 32.0 39.0 32.0 39.0 10 36.646498866512154 38.0 35.0 39.0 33.0 39.0 11 37.05044147703356 39.0 37.0 39.0 34.0 39.0 12 37.07057546696149 39.0 37.0 39.0 34.0 39.0 13 36.971923987848605 39.0 37.0 39.0 33.0 39.0 14 38.05896165413152 40.0 37.0 41.0 33.0 41.0 15 38.1316316646296 40.0 37.0 41.0 33.0 41.0 16 38.10969220860233 40.0 37.0 41.0 33.0 41.0 17 37.99738308846277 40.0 37.0 41.0 33.0 41.0 18 37.872466134831804 40.0 37.0 41.0 33.0 41.0 19 37.72209515212066 40.0 37.0 41.0 33.0 41.0 20 37.76267249554973 40.0 36.0 41.0 33.0 41.0 21 37.697533713022175 40.0 36.0 41.0 33.0 41.0 22 37.745059058013275 39.0 36.0 41.0 33.0 41.0 23 37.71182529579722 39.0 36.0 41.0 33.0 41.0 24 37.65813296547807 39.0 36.0 41.0 33.0 41.0 25 37.543572084248325 39.0 35.0 41.0 33.0 41.0 26 37.446026199544576 39.0 35.0 41.0 33.0 41.0 27 37.324461529878945 39.0 35.0 41.0 33.0 41.0 28 37.28185050132114 39.0 35.0 41.0 32.0 41.0 29 37.22913697706145 39.0 35.0 41.0 32.0 41.0 30 37.15714148058363 39.0 35.0 41.0 32.0 41.0 31 36.97265428874272 39.0 35.0 41.0 31.0 41.0 32 36.8164358273447 39.0 35.0 41.0 31.0 41.0 33 36.66317407026103 39.0 35.0 41.0 30.0 41.0 34 36.406731954214195 39.0 35.0 41.0 30.0 41.0 35 36.25302390213968 39.0 35.0 41.0 30.0 41.0 36 36.068420065017065 39.0 35.0 41.0 29.0 41.0 37 35.98007394296553 39.0 35.0 40.0 29.0 41.0 38 35.75981215038112 39.0 35.0 40.0 27.0 41.0 39 35.70035348591889 39.0 35.0 40.0 27.0 41.0 40 35.48746063221743 38.0 35.0 40.0 26.0 41.0 41 35.38962059854244 38.0 35.0 40.0 25.0 41.0 42 35.30124911882097 38.0 34.0 40.0 25.0 41.0 43 35.33510160818343 38.0 34.0 40.0 25.0 41.0 44 35.147718570436 38.0 34.0 40.0 24.0 41.0 45 35.052591807443996 38.0 34.0 40.0 24.0 41.0 46 34.929789683485566 38.0 34.0 40.0 24.0 41.0 47 34.72005132392395 38.0 34.0 40.0 23.0 41.0 48 34.61399033365622 38.0 34.0 40.0 23.0 41.0 49 34.46526252795683 38.0 33.0 40.0 23.0 41.0 50 34.2329862713575 37.0 33.0 40.0 22.0 41.0 51 32.011446452208396 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 12.0 10 14.0 11 7.0 12 5.0 13 8.0 14 9.0 15 19.0 16 23.0 17 38.0 18 83.0 19 159.0 20 277.0 21 472.0 22 698.0 23 1015.0 24 1538.0 25 2167.0 26 2747.0 27 3164.0 28 3319.0 29 3877.0 30 4399.0 31 5509.0 32 6953.0 33 9016.0 34 13270.0 35 16248.0 36 18267.0 37 28219.0 38 36274.0 39 39361.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.50837056684535 20.948985439625922 25.620882548344397 12.921761445184323 2 32.13374649430213 25.681740956187017 25.39824220632014 16.786270343190704 3 29.471698304586187 25.678190882396194 29.353024409293077 15.497086403724536 4 25.97538277402766 24.814001491030993 30.823262112091044 18.387353622850302 5 25.650804598867023 28.545636198580986 27.307674752382354 18.49588445016964 6 25.330283650895886 34.51533885454333 27.026204616110235 13.128172878450545 7 60.19352973693953 26.849715233366638 9.264171133842854 3.6925838958509782 8 80.85749496650251 5.729819098382688 9.543105503121529 3.869580431993265 9 74.51909178969362 7.671202308562271 11.198454196440798 6.611251705303303 10 34.93779763565086 35.441400960548535 16.995724696849056 12.625076706951551 11 31.219348916466767 23.793608852869728 27.3938908301594 17.593151400504112 12 28.71603974054032 21.427738247987868 30.138097870462875 19.71812414100893 13 25.7131844669057 22.668742614578633 33.011121874033236 18.606951044482425 14 21.04230166498461 26.061598851804707 31.866983806591982 21.029115676618705 15 19.62277930205549 24.971726198023116 36.47142951328488 18.93406498663651 16 24.02689941626644 25.854680265139795 30.23952855020058 19.878891768393185 17 24.230775082539218 24.11412980084086 30.691909381830722 20.963185734789203 18 24.667941312208704 24.190202810644134 30.98047966568448 20.16137621146268 19 23.804766227640876 26.972953509247944 28.280902124465584 20.941378138645597 20 24.18563843005594 27.189508010487934 29.628408704780934 18.996444854675193 21 23.805273381039562 27.226023055193505 30.714731284771705 18.253972278995228 22 23.16271002490123 22.829510241962886 30.903392349083823 23.104387384052057 23 21.1396751175328 26.20563041703224 31.731066695743458 20.9236277696915 24 22.5201466687629 24.000527439534636 30.429711074708766 23.049614816993696 25 20.905370247338713 28.404647553745583 28.96454490589769 21.725437293018018 26 20.817125555966914 25.559009833704398 29.284558700470132 24.339305909858556 27 20.97687887655379 25.825265368015867 30.246628697782217 22.951227057648126 28 18.654116310560457 25.567124288083416 31.955228497963777 23.82353090339235 29 21.577348500600976 25.113729149655896 29.477276991971763 23.831645357771365 30 23.53242485254515 24.15064484554643 30.22634256183468 22.09058774007374 31 22.447116579351757 24.790165281292634 30.174612915168453 22.58810522418716 32 24.329162841884784 25.017370003905082 27.855400422965936 22.798066731244198 33 22.715907880656662 24.92963246593197 28.07398353780068 24.28047611561069 34 20.03915224237875 24.755171696783126 32.247856009007045 22.957820051831078 35 20.720259256817407 27.188493703690554 28.39450448577181 23.696742553720224 36 21.493668189817374 27.20269399885383 28.83877086302294 22.464866948305854 37 21.228934115701975 27.50546457787087 29.272387018901608 21.993214287525547 38 20.013794572444326 27.85134319577643 28.285973658452473 23.848888573326775 39 21.120403288382636 25.577267356057188 28.950851764133095 24.351477591427077 40 22.07790890510653 25.662469127036854 29.759254281642566 22.500367686214048 41 19.79318284401483 27.25188787852662 28.755090552239338 24.199838725219216 42 20.524498044923646 26.0088548983411 30.450504364054996 23.016142692680255 43 21.421652407203606 25.398749359718835 29.141034288641286 24.038563944436273 44 21.594084562757697 24.502102150837562 28.999031337008507 24.904781949396234 45 20.71214480243839 23.91025413456808 28.908250878643265 26.46935018435026 46 22.30054924713078 25.95205371768799 28.179471444727888 23.567925590453346 47 19.215535122908626 25.211609755602776 32.105345903975575 23.467509217513022 48 20.05385969094072 25.6518189056644 29.9210362158242 24.373285187570684 49 21.554526597659994 24.385964022537898 30.72335289254941 23.336156487252698 50 19.720659908002375 24.99759102135623 30.51947722627663 24.762271844364765 51 19.98590113551646 24.56752493926838 28.809355965899 26.637217959316157 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 181.5 2 289.0 3 1506.0 4 2723.0 5 1855.5 6 988.0 7 857.0 8 726.0 9 723.5 10 721.0 11 705.5 12 690.0 13 687.5 14 685.0 15 667.0 16 649.0 17 634.5 18 620.0 19 637.0 20 654.0 21 753.5 22 853.0 23 954.5 24 1056.0 25 1212.5 26 1579.5 27 1790.0 28 2243.5 29 2697.0 30 3030.5 31 3364.0 32 3810.0 33 4256.0 34 4957.0 35 5658.0 36 6188.0 37 6718.0 38 7255.0 39 7792.0 40 8485.5 41 9179.0 42 10272.0 43 11365.0 44 12536.0 45 13707.0 46 17219.0 47 20731.0 48 19115.5 49 17500.0 50 17027.5 51 16555.0 52 14820.0 53 13085.0 54 11992.0 55 10899.0 56 10087.5 57 9276.0 58 8700.0 59 8124.0 60 7349.5 61 6575.0 62 5783.0 63 4991.0 64 4289.5 65 3588.0 66 3054.5 67 2521.0 68 2098.5 69 1676.0 70 1376.5 71 1077.0 72 951.0 73 825.0 74 653.0 75 392.0 76 303.0 77 231.5 78 160.0 79 130.5 80 101.0 81 65.0 82 29.0 83 23.0 84 17.0 85 17.0 86 17.0 87 12.5 88 8.0 89 6.0 90 4.0 91 5.0 92 6.0 93 5.5 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 197179.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.3151958372849 #Duplication Level Percentage of deduplicated Percentage of total 1 72.33572890102911 36.395863656880294 2 10.045257078348167 10.108581542659207 3 5.3078791666246685 8.012009392480945 4 3.3857132777615386 6.814113064778704 5 2.348529900918245 5.90833709472104 6 1.7679491185453224 5.337282367797788 7 1.324449909788229 4.664796961136835 8 0.9404199131144733 3.7853929678109735 9 0.6803681043432683 3.0809568970326455 >10 1.8324580943645363 11.714229202907003 >50 0.014111338460452974 0.4949817171199773 >100 0.013103385713277762 1.339392125936332 >500 0.0010079527471752124 0.46505966659735576 >1k 0.0030238582415256375 1.8790033421408974 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1529 0.7754375465947185 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG 1113 0.564461732740302 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC 1063 0.5391040628058769 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC 917 0.46505966659735576 No Hit GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 286 0.14504587202491137 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG 283 0.14352441182884587 No Hit GAATCTATCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC 266 0.13490280405114133 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCT 243 0.12323827588130581 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC 231 0.1171524350970438 No Hit GAACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCT 230 0.1166452816983553 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 225 0.1141095147049128 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09027330496655324 0.0 2 0.0 0.0 0.0 0.4944745637212888 0.0 3 0.0 0.0 0.0 0.6902357756150502 0.0 4 0.0 0.0 0.0 1.0132924905796257 0.0 5 0.0 0.0 0.0 2.178223847367113 0.0 6 0.0 0.0 0.0 2.6529194285395503 0.0 7 0.0 0.0 0.0 3.2148453942864097 0.0 8 0.0 0.0 0.0 4.241831026630625 0.0 9 0.0 0.0 0.0 4.625238996039132 0.0 10 0.0 0.0 0.0 6.214657747528895 0.0 11 0.0 0.0 0.0 7.060589616541315 0.0 12 0.0 0.0 0.0 8.418746418229121 0.0 13 0.0 0.0 0.0 8.810268842016646 0.0 14 0.0 0.0 0.0 8.966472088812703 0.0 15 0.0 0.0 0.0 9.261128213450723 0.0 16 0.0 0.0 0.0 9.707930357695291 0.0 17 0.0 0.0 0.0 10.221169597168055 0.0 18 0.0 0.0 0.0 10.884019089253927 0.0 19 0.0 0.0 0.0 11.239026468335878 0.0 20 0.0 0.0 0.0 11.67822131160012 0.0 21 0.0 0.0 0.0 12.126037762642067 0.0 22 0.0 0.0 0.0 12.627105320546306 0.0 23 0.0 0.0 0.0 13.101800901718743 0.0 24 0.0 0.0 0.0 13.483180257532496 0.0 25 0.0 0.0 0.0 13.836159023019693 0.0 26 0.0 0.0 0.0 14.157187124389514 0.0 27 0.0 0.0 0.0 14.534002099615071 0.0 28 0.0 0.0 0.0 14.901181160265546 0.0 29 0.0 0.0 0.0 15.27546036849766 0.0 30 0.0 0.0 0.0 15.78312092058485 0.0 31 0.0 0.0 0.0 16.17515049777106 0.0 32 0.0 0.0 0.0 16.56109423417301 0.0 33 0.0 0.0 0.0 16.915087306457583 0.0 34 0.0 0.0 0.0 17.294945202075272 0.0 35 0.0 0.0 0.0 17.720954056973614 0.0 36 0.0 0.0 0.0 18.090161731218842 0.0 37 5.071533986885014E-4 0.0 0.0 18.477626927816857 0.0 38 5.071533986885014E-4 0.0 0.0 18.922907611865362 0.0 39 5.071533986885014E-4 0.0 0.0 19.53656322427845 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGGT 30 2.1563283E-6 45.000004 5 GTCGAGG 25 3.8790164E-5 45.0 2 GGCACGT 20 7.019059E-4 45.0 11 CGCATGG 20 7.019059E-4 45.0 2 ACCGATC 20 7.019059E-4 45.0 10 GCACGTG 20 7.019059E-4 45.0 12 TAACGTC 20 7.019059E-4 45.0 32 AGGGTAC 25 3.8790164E-5 45.0 6 TACGGAG 20 7.019059E-4 45.0 1 GCGCATG 20 7.019059E-4 45.0 1 ACGGCGG 20 7.019059E-4 45.0 17 GGTATCC 20 7.019059E-4 45.0 38 GTCAAGC 20 7.019059E-4 45.0 16 GCGATTG 25 3.8790164E-5 45.0 9 TAGGCGA 25 3.8790164E-5 45.0 6 TCGAGGG 45 3.8198777E-10 45.0 3 CGTTTTA 100 0.0 45.0 1 CGTTTTT 545 0.0 41.69725 1 TACGGCT 135 0.0 41.666664 7 GCGATGT 65 0.0 41.53846 9 >>END_MODULE