##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936368.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 221012 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.903113858071055 33.0 31.0 34.0 30.0 34.0 2 32.01937903824227 33.0 31.0 34.0 30.0 34.0 3 31.383200912167666 33.0 31.0 34.0 28.0 34.0 4 35.405036830579334 37.0 35.0 37.0 33.0 37.0 5 35.70658606772483 37.0 35.0 37.0 35.0 37.0 6 35.77075905380703 37.0 35.0 37.0 35.0 37.0 7 27.17884549255244 36.0 19.0 37.0 0.0 37.0 8 31.42007221327349 37.0 26.0 37.0 17.0 37.0 9 36.18731109623007 39.0 32.0 39.0 32.0 39.0 10 36.84684542015818 38.0 37.0 39.0 34.0 39.0 11 37.28289866613578 39.0 37.0 39.0 34.0 39.0 12 37.38692469187193 39.0 37.0 39.0 35.0 39.0 13 37.40442147937669 39.0 37.0 39.0 35.0 39.0 14 38.69497583841601 40.0 38.0 41.0 35.0 41.0 15 38.74929415597343 40.0 38.0 41.0 35.0 41.0 16 38.670764483376466 40.0 38.0 41.0 35.0 41.0 17 38.566308616726694 40.0 38.0 41.0 34.0 41.0 18 38.36405263062639 40.0 38.0 41.0 34.0 41.0 19 38.1470236910213 40.0 37.0 41.0 34.0 41.0 20 38.10203518360994 40.0 36.0 41.0 34.0 41.0 21 38.0686523808662 40.0 36.0 41.0 34.0 41.0 22 38.05486579914213 40.0 36.0 41.0 34.0 41.0 23 37.97851700360162 40.0 36.0 41.0 34.0 41.0 24 37.935225236638736 40.0 36.0 41.0 34.0 41.0 25 37.85063706948039 40.0 36.0 41.0 33.0 41.0 26 37.74186921977087 40.0 36.0 41.0 33.0 41.0 27 37.63495647295169 40.0 36.0 41.0 33.0 41.0 28 37.61665882395526 40.0 36.0 41.0 33.0 41.0 29 37.603840515447125 40.0 36.0 41.0 33.0 41.0 30 37.50608111776736 40.0 36.0 41.0 33.0 41.0 31 37.359794943261 40.0 35.0 41.0 33.0 41.0 32 37.106089262121515 40.0 35.0 41.0 32.0 41.0 33 36.842560584945616 39.0 35.0 41.0 31.0 41.0 34 36.49415416357483 39.0 35.0 41.0 30.0 41.0 35 36.23205527301685 39.0 35.0 41.0 29.0 41.0 36 35.924008651113965 39.0 35.0 41.0 26.0 41.0 37 35.789160769550975 39.0 35.0 41.0 25.0 41.0 38 35.65622681121387 39.0 35.0 41.0 25.0 41.0 39 35.60865925832081 39.0 35.0 41.0 24.0 41.0 40 35.46699726711672 39.0 35.0 41.0 24.0 41.0 41 35.40315457984182 39.0 35.0 41.0 23.0 41.0 42 35.32674243932456 39.0 35.0 41.0 23.0 41.0 43 35.27427470001629 39.0 35.0 41.0 23.0 41.0 44 35.109794943261 39.0 35.0 40.0 22.0 41.0 45 35.01869129278048 39.0 35.0 40.0 22.0 41.0 46 34.929189365283335 39.0 35.0 40.0 22.0 41.0 47 34.81197853510216 38.0 34.0 40.0 21.0 41.0 48 34.748262537780754 38.0 34.0 40.0 20.0 41.0 49 34.59238864858017 38.0 34.0 40.0 20.0 41.0 50 34.3941143467323 38.0 34.0 40.0 20.0 41.0 51 32.47044051906684 36.0 31.0 39.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 9.0 10 8.0 11 14.0 12 1.0 13 2.0 14 3.0 15 5.0 16 19.0 17 24.0 18 66.0 19 119.0 20 216.0 21 402.0 22 697.0 23 1179.0 24 1937.0 25 3149.0 26 4118.0 27 4335.0 28 4063.0 29 3881.0 30 4116.0 31 4828.0 32 5897.0 33 8209.0 34 11779.0 35 16016.0 36 19290.0 37 31459.0 38 43225.0 39 51930.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.96767596329611 20.202522939930866 25.85289486543717 16.976906231335857 2 35.681320471286625 23.99598211861799 25.75425768736539 14.568439722729988 3 29.123305521872116 23.294662733245254 33.256565254375325 14.325466490507303 4 24.503194396684343 24.990950717608094 34.601741081932204 15.90411380377536 5 23.539898286065917 29.092537961739634 31.498289685627928 15.869274066566522 6 23.75481874287369 33.804499303205255 29.61649141223101 12.824190541690045 7 59.11669954572603 26.303096664434513 11.50209038423253 3.0781134056069352 8 81.03360903480355 4.106564349447089 12.39570702043328 2.4641195953160917 9 74.6529600202704 7.842560584945614 13.505601505800591 3.9988778889834036 10 28.155484770057736 41.883246158579624 19.75775071036867 10.203518360993973 11 25.312652706640364 26.267804463106074 33.868296744068196 14.551246086185365 12 24.59504461296219 23.920420610645575 34.38229598392847 17.10223879246376 13 21.84225290934429 24.118599895028325 37.43914357591443 16.600003619712957 14 19.49170180804662 27.894865437170836 34.086836913832734 18.526595840949813 15 18.21665791902702 27.45009320760864 37.570810634716665 16.762438238647675 16 21.65176551499466 27.02477693518904 34.36238756266628 16.96106998715002 17 21.426438383436196 25.456536296671672 33.964219137422404 19.15280618246973 18 21.804245923298282 25.514904168099466 35.32885092212187 17.35199898648037 19 21.236855917325755 26.92568729299766 33.87417877762293 17.963278012053642 20 21.94360487213364 27.460047418239736 34.1673755271207 16.428972182505927 21 21.799268817982735 26.676832027220243 34.69087651349248 16.833022641304545 22 21.58525328941415 23.73853003456826 35.11936003474924 19.556856641268347 23 19.061408430311477 26.67818941957903 35.38767125766927 18.872730892440227 24 19.32655240439433 25.935243335203516 35.569109369626986 19.169094890775163 25 18.986299386458654 28.696631857093735 33.828932365663405 18.48813639078421 26 18.984037065860676 28.482163864405553 33.8963495194831 18.637449550250665 27 19.36636924691872 27.94418402620672 34.462382133096845 18.227064593777715 28 17.89721825059273 27.0188949016343 36.3116029898829 18.772283857890066 29 18.845130581144915 25.901760990353466 36.194414782907714 19.058693645593905 30 19.98172044956835 26.909398584692234 34.59133440718151 18.517546558557907 31 21.564439939912766 27.16775559698116 32.35027962282591 18.917524840280166 32 21.36671311964961 27.57361591225816 32.79821910122527 18.261451866866956 33 20.50069679474418 27.531989213255386 32.47515971983422 19.492154272166218 34 19.98353030604673 27.627911606609594 33.482344850053394 18.906213237290284 35 20.23464789242213 27.556422275713537 32.58510850089588 19.623821330968454 36 20.90022261234684 28.597994679021955 31.957993231136772 18.543789477494435 37 20.528749570159086 29.52916583714911 31.51955549924891 18.42252909344289 38 20.890268401715744 29.126925234828878 30.237272184315785 19.745534179139597 39 21.368070512008398 28.328326063743148 30.41373319095796 19.889870233290498 40 21.922791522632252 27.627911606609594 31.10012126038405 19.349175610374097 41 20.247769351890398 28.68848750294102 30.885653267695872 20.178089877472715 42 21.24997737679402 28.191229435505765 30.910538794273613 19.6482543934266 43 21.483448862505202 28.201636110256455 30.233200007239425 20.081715019998914 44 21.346804698387416 27.959115342153368 30.60376812118799 20.090311838271223 45 20.54594320670371 27.939659385010767 30.252655964382026 21.2617414439035 46 21.15360251932022 28.726494488987026 29.591605885653266 20.528297106039492 47 19.877653702061426 27.996217399960184 32.00052485837873 20.125604039599658 48 21.011076321647693 27.473168877707998 30.725028505239532 20.790726295404774 49 20.785749190089227 26.579552241507248 31.769315693265526 20.865382875138003 50 20.28396648145802 27.146037319240584 31.48381083380088 21.086185365500516 51 20.28215662497964 26.502180877056446 30.46667149295061 22.748991005013302 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 59.0 1 144.0 2 229.0 3 3115.0 4 6001.0 5 4226.5 6 2452.0 7 2154.5 8 1857.0 9 1798.0 10 1739.0 11 1708.5 12 1678.0 13 1641.5 14 1605.0 15 1507.0 16 1409.0 17 1404.5 18 1400.0 19 1397.0 20 1394.0 21 1440.0 22 1486.0 23 1586.0 24 1686.0 25 2005.0 26 2587.5 27 2851.0 28 3412.0 29 3973.0 30 4682.5 31 5392.0 32 6081.0 33 6770.0 34 7629.5 35 8489.0 36 9099.5 37 9710.0 38 10414.0 39 11118.0 40 12232.5 41 13347.0 42 14291.5 43 15236.0 44 16215.0 45 17194.0 46 18606.0 47 20018.0 48 19573.5 49 19129.0 50 18006.5 51 16884.0 52 14844.0 53 12804.0 54 11142.5 55 9481.0 56 8358.0 57 7235.0 58 6354.5 59 5474.0 60 4739.5 61 4005.0 62 3368.5 63 2732.0 64 2206.0 65 1680.0 66 1260.0 67 840.0 68 695.0 69 550.0 70 431.5 71 313.0 72 256.5 73 200.0 74 158.5 75 94.0 76 71.0 77 49.0 78 27.0 79 25.0 80 23.0 81 16.0 82 9.0 83 9.0 84 9.0 85 8.5 86 8.0 87 4.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 221012.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.006755965700755 #Duplication Level Percentage of deduplicated Percentage of total 1 68.4522612117141 33.54623260502876 2 12.370149592553593 12.124418046829732 3 6.176207369766344 9.080276620911052 4 3.8839941717327173 7.613678181852372 5 2.6039566808328094 6.380573480141481 6 1.7973430086770068 5.284917012773547 7 1.2768042385835696 4.380042361536614 8 0.9364494907162503 3.671388133258882 9 0.6826817613014898 3.011041663050319 >10 1.7922879206013071 11.323834930428077 >50 0.014927439386141042 0.5545113974255681 >100 0.010946788883170097 1.2626473244809109 >500 9.95162625742736E-4 0.2618932457498066 >1k 9.95162625742736E-4 1.5045449965328739 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3085 1.3958518089515501 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 537 0.24297323222268477 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCG 445 0.20134653321991566 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGC 444 0.20089406910032032 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTC 380 0.17193636544622012 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 313 0.14162126943333395 No Hit GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 224 0.10135196278935081 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08325339800553816 0.0 2 0.0 0.0 0.0 0.36966318570937323 0.0 3 0.0 0.0 0.0 0.578249144842814 0.0 4 0.0 0.0 0.0 0.7759759651059671 0.0 5 0.0 0.0 0.0 1.448790110944202 0.0 6 0.0 0.0 0.0 1.8433388232313177 0.0 7 0.0 0.0 0.0 2.226123468408955 0.0 8 0.0 0.0 0.0 3.008886395308852 0.0 9 0.0 0.0 0.0 3.338280274374242 0.0 10 0.0 0.0 0.0 4.276238394295333 0.0 11 0.0 0.0 0.0 5.05990624943442 0.0 12 0.0 0.0 0.0 5.951713029156788 0.0 13 0.0 0.0 0.0 6.286988941776917 0.0 14 0.0 0.0 0.0 6.449423560711636 0.0 15 0.0 0.0 0.0 6.675203156389698 0.0 16 0.0 0.0 0.0 7.080611007547102 0.0 17 0.0 0.0 0.0 7.61587606102836 0.0 18 0.0 0.0 0.0 8.206794201219843 0.0 19 0.0 0.0 0.0 8.550666932112284 0.0 20 0.0 0.0 0.0 8.936166362007492 0.0 21 0.0 0.0 0.0 9.342931605523683 0.0 22 0.0 0.0 0.0 9.828878069969052 0.0 23 4.524641195953161E-4 0.0 0.0 10.281794653683964 0.0 24 4.524641195953161E-4 0.0 0.0 10.661412050024433 0.0 25 4.524641195953161E-4 0.0 0.0 11.005284780916874 0.0 26 4.524641195953161E-4 0.0 0.0 11.31567516695926 0.0 27 4.524641195953161E-4 0.0 0.0 11.652308471938175 0.0 28 4.524641195953161E-4 0.0 0.0 12.013374839375238 0.0 29 4.524641195953161E-4 0.0 0.0 12.38213309684542 0.0 30 4.524641195953161E-4 0.0 0.0 12.81106908222178 0.0 31 4.524641195953161E-4 0.0 0.0 13.179827339691963 0.0 32 4.524641195953161E-4 0.0 0.0 13.568494018424339 0.0 33 4.524641195953161E-4 0.0 0.0 13.924583280545853 0.0 34 4.524641195953161E-4 0.0 0.0 14.304200676886323 0.0 35 4.524641195953161E-4 0.0 0.0 14.704178958608582 0.0 36 4.524641195953161E-4 0.0 0.0 15.088773460264601 0.0 37 4.524641195953161E-4 0.0 0.0 15.441243009429352 0.0 38 4.524641195953161E-4 0.0 0.0 15.80954880277994 0.0 39 4.524641195953161E-4 0.0 0.0 16.249796391146184 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 20 7.0209114E-4 45.0 1 GCTAACG 20 7.0209114E-4 45.0 1 GCCACCG 25 3.8805512E-5 45.0 9 TAGGCGA 30 2.1575215E-6 44.999996 6 CGTTTTT 1525 0.0 44.409836 1 CGTTTTA 245 0.0 43.163265 1 CGAAGGA 75 0.0 42.0 4 AGGCGAT 105 0.0 40.714287 7 CGGTTTA 50 1.0732037E-9 40.5 1 CGGTTTT 195 0.0 40.384617 1 GGCGATT 85 0.0 39.705883 8 GGCGATA 75 0.0 39.0 8 ATTGGGC 35 6.225413E-6 38.57143 4 CGTATGG 30 1.1369408E-4 37.499996 2 AAGCGGC 30 1.1369408E-4 37.499996 22 AAACGGC 30 1.1369408E-4 37.499996 6 TGCGAAG 30 1.1369408E-4 37.499996 2 CCAAGCG 30 1.1369408E-4 37.499996 20 CGGCTAC 30 1.1369408E-4 37.499996 25 TTTGCGG 60 1.546141E-10 37.499996 2 >>END_MODULE