SRR2936367.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936367.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	198558
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	781	0.3933359522154735	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCG	315	0.15864382195630494	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGC	287	0.1445421488935223	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCACGT	20	7.0191786E-4	45.000004	45
GCGATGC	20	7.0191786E-4	45.000004	9
CGGTCTA	20	7.0191786E-4	45.000004	31
GTAACGG	20	7.0191786E-4	45.000004	2
ATTACGG	30	2.1564065E-6	44.999996	2
CGGGATT	60	3.6379788E-12	41.249996	6
CCGCACT	40	3.4389814E-7	39.375004	34
TCCGCCC	35	6.222219E-6	38.571426	35
GGATCGT	35	6.222219E-6	38.571426	8
CGCGCAA	35	6.222219E-6	38.571426	18
AACGACG	35	6.222219E-6	38.571426	13
CGCAATC	35	6.222219E-6	38.571426	20
ACGCGCA	35	6.222219E-6	38.571426	17
CGTTTTT	320	0.0	37.968754	1
TTAGGAT	30	1.1365239E-4	37.499996	5
GATCGTT	30	1.1365239E-4	37.499996	9
TCACACG	30	1.1365239E-4	37.499996	38
AGGCGAT	60	1.546141E-10	37.499996	7
ATCGTTT	30	1.1365239E-4	37.499996	10
TGTTGCG	30	1.1365239E-4	37.499996	2