SRR2936366.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936366.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	287973
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3208	1.113993325763179	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	560	0.19446267532025574	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	20	7.0244714E-4	45.000004	2
GTATGCG	20	7.0244714E-4	45.000004	1
TATCGCG	20	7.0244714E-4	45.000004	1
CCCGTGA	25	3.883501E-5	45.0	37
TAGGCGA	25	3.883501E-5	45.0	6
CACGACG	65	0.0	44.999996	26
CGTTTTT	1150	0.0	43.630436	1
TCTCACG	80	0.0	42.187504	23
TCACGAC	75	0.0	42.000004	25
GCGATAA	40	3.4462028E-7	39.375004	9
CGTTTTA	225	0.0	39.0	1
AGGCGAT	110	0.0	38.863636	7
GCGATTT	35	6.231994E-6	38.571426	9
CGGGATA	65	9.094947E-12	38.07692	6
AGTTGCG	30	1.1377984E-4	37.499996	1
CGGGCTA	30	1.1377984E-4	37.499996	6
CGATGTT	30	1.1377984E-4	37.499996	10
TCGACGG	30	1.1377984E-4	37.499996	2
CTCACGA	85	0.0	37.058823	24
ATAGGGC	80	0.0	36.562504	4