##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936366.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 287973 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02590173384311 33.0 31.0 34.0 30.0 34.0 2 32.15994902299868 33.0 31.0 34.0 30.0 34.0 3 31.762866657638043 33.0 31.0 34.0 30.0 34.0 4 35.63981692728138 37.0 35.0 37.0 33.0 37.0 5 35.823115361509586 37.0 35.0 37.0 35.0 37.0 6 35.843502689488254 37.0 35.0 37.0 35.0 37.0 7 26.88078048983759 36.0 10.0 37.0 0.0 37.0 8 31.252718136769765 37.0 19.0 37.0 17.0 37.0 9 36.11256958117601 39.0 32.0 39.0 32.0 39.0 10 36.81028429748622 38.0 35.0 39.0 34.0 39.0 11 37.278036482586906 39.0 37.0 39.0 34.0 39.0 12 37.337785139579054 39.0 37.0 39.0 35.0 39.0 13 37.327933521545425 39.0 37.0 39.0 34.0 39.0 14 38.53159844846566 40.0 38.0 41.0 34.0 41.0 15 38.60378577158275 40.0 38.0 41.0 34.0 41.0 16 38.55133988255844 40.0 38.0 41.0 34.0 41.0 17 38.475402207845875 40.0 38.0 41.0 34.0 41.0 18 38.33565299524608 40.0 38.0 41.0 34.0 41.0 19 38.175565070336454 40.0 37.0 41.0 34.0 41.0 20 38.160570609050154 40.0 37.0 41.0 34.0 41.0 21 38.10921510002674 40.0 37.0 41.0 34.0 41.0 22 38.1016761988103 40.0 37.0 41.0 34.0 41.0 23 38.00741041694881 40.0 36.0 41.0 34.0 41.0 24 37.970952137874036 40.0 36.0 41.0 34.0 41.0 25 37.858205456761574 40.0 36.0 41.0 33.0 41.0 26 37.78593826504568 40.0 36.0 41.0 33.0 41.0 27 37.668020960298364 40.0 36.0 41.0 33.0 41.0 28 37.60523035145656 40.0 36.0 41.0 33.0 41.0 29 37.59546207456949 40.0 36.0 41.0 33.0 41.0 30 37.515225385713244 40.0 36.0 41.0 33.0 41.0 31 37.34099030117407 40.0 35.0 41.0 33.0 41.0 32 37.14145076100885 40.0 35.0 41.0 32.0 41.0 33 36.952978230598006 39.0 35.0 41.0 31.0 41.0 34 36.67988665604067 39.0 35.0 41.0 30.0 41.0 35 36.45865758248169 39.0 35.0 41.0 30.0 41.0 36 36.248978202817625 39.0 35.0 41.0 29.0 41.0 37 36.125883329339906 39.0 35.0 41.0 29.0 41.0 38 35.97117090838377 39.0 35.0 41.0 27.0 41.0 39 35.93737260090356 39.0 35.0 41.0 27.0 41.0 40 35.76376257496363 39.0 35.0 41.0 26.0 41.0 41 35.6466995169686 39.0 35.0 41.0 26.0 41.0 42 35.558962124921436 39.0 35.0 40.0 25.0 41.0 43 35.49895649939404 39.0 35.0 40.0 25.0 41.0 44 35.304920947449936 39.0 35.0 40.0 24.0 41.0 45 35.24709608192435 38.0 34.0 40.0 24.0 41.0 46 35.14007910463828 38.0 34.0 40.0 23.0 41.0 47 35.02689488250635 38.0 34.0 40.0 23.0 41.0 48 34.93280967312908 38.0 34.0 40.0 23.0 41.0 49 34.782746993641766 38.0 34.0 40.0 23.0 41.0 50 34.59363898698837 38.0 34.0 40.0 23.0 41.0 51 32.683609227253946 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 20.0 10 18.0 11 17.0 12 3.0 13 10.0 14 8.0 15 19.0 16 25.0 17 41.0 18 102.0 19 209.0 20 348.0 21 515.0 22 879.0 23 1375.0 24 2061.0 25 3030.0 26 4097.0 27 4784.0 28 4860.0 29 5027.0 30 5627.0 31 6636.0 32 8297.0 33 11196.0 34 16728.0 35 21550.0 36 25735.0 37 42619.0 38 56485.0 39 65634.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.25383976970063 21.277341973032193 25.901386588325988 15.567431668941186 2 34.140006181135035 23.67339993679963 26.27468547398541 15.911908408079926 3 30.776149152871973 23.144878165661364 30.729269757928694 15.34970292353797 4 26.50352637226407 25.444052046546027 30.29277050279019 17.75965107839971 5 24.29533324304709 30.015661190458825 28.784643004726135 16.904362561767943 6 26.083348091661374 33.80664159487174 26.549711257652625 13.560299055814259 7 60.97307733711147 27.43555819469186 8.442458147117959 3.1489063210787123 8 84.23984192962534 3.892031544623975 9.334208415372276 2.5339181103784036 9 76.7783785285426 8.274734089654238 11.083677983699861 3.8632093981032942 10 31.706444701412977 39.606143631521014 16.879707472575554 11.807704194490455 11 30.363263222593783 25.214863893490012 27.610227347702736 16.811645536213465 12 28.84020376910335 22.75768908890764 29.710771495938854 18.69133564605015 13 25.403075982817835 22.963958426658053 32.02834988002348 19.604615710500635 14 21.068989106617632 25.836449944960115 32.22697961267202 20.867581335750227 15 20.290791150559254 25.62636080465877 34.388987856500435 19.69386018828154 16 24.445347306865575 25.201320957173067 32.0339059564612 18.31942577950016 17 23.85987575224066 24.558205109506794 30.920954395030087 20.660964743222454 18 24.336656561552644 24.543967663635133 31.7324888097148 19.38688696509742 19 23.699791299878807 25.614206887451253 30.39486340733333 20.29113840533661 20 24.831494619287227 26.179190410212065 30.029898636330486 18.959416334170218 21 24.69050917968004 25.375990110183942 31.13937764998802 18.794123060148 22 24.45889024318252 23.328575942883532 31.604351796869846 20.6081820170641 23 21.78120865497807 25.45828949241769 32.05856104565358 20.701940806950653 24 21.915596253815462 24.907196160751184 32.103704166710074 21.073503418723284 25 21.819059425710048 26.67229219405986 30.436186725838883 21.072461654391212 26 21.668003597559494 26.979959926798692 30.101433120466154 21.25060335517566 27 21.722522597604637 25.47738850517236 32.071409472415816 20.728679424807186 28 20.669993367433754 26.415670913592592 31.977650682529262 20.936685036444388 29 21.945807419445572 25.69025568369257 31.331409541866773 21.032527354995086 30 22.791720057088686 25.229448594139033 31.190771357036944 20.788059991735334 31 23.438655707305895 25.945835199827762 30.055942744632308 20.559566348234036 32 23.8866143700972 26.300035072732513 30.188594069582912 19.624756487587376 33 23.896684758640564 26.372958575977606 29.339903393720938 20.390453271660885 34 22.307994152229547 25.969101269910723 31.722418421171426 20.000486156688304 35 22.563573668364743 26.815361162331193 30.08233410771149 20.53873106159258 36 23.344549662641985 27.64252204199699 29.098908578234767 19.91401971712626 37 22.490997419897006 28.817632208575112 29.029457622763243 19.66191274876464 38 21.948238202887076 28.13770735450893 28.924933934778608 20.989120507825387 39 23.061189764318183 27.02927010518347 28.56969229754178 21.33984783295656 40 23.658120726595897 26.636524951992023 29.326360457403993 20.378993864008084 41 21.27248040614919 27.37652488254107 29.900025349598746 21.450969361710996 42 22.418768426206622 27.522024634253906 28.75859889642432 21.300608043115155 43 21.724258871491426 27.551888545106664 29.693408757070976 21.03044382633094 44 22.021161706132172 27.12615418806624 29.478110795109263 21.37457331069232 45 22.203470464244912 26.625065544339225 28.521771138266434 22.64969285314943 46 21.805516489393103 27.1060134109795 29.02911036798589 22.05935973164151 47 21.54958971848055 27.14282241737941 30.145534477190573 21.16205338694947 48 21.69300594152924 26.81605567188591 30.027815107666346 21.46312327891851 49 22.199997916471336 26.35837387532859 30.10421115868502 21.337417049515057 50 21.124897125772208 26.43650620023405 30.204567789341365 22.23402888465238 51 21.31831803676039 25.98993655655218 29.636806228361685 23.054939178325746 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 131.0 1 284.5 2 438.0 3 3365.5 4 6293.0 5 4236.0 6 2179.0 7 1836.5 8 1494.0 9 1455.5 10 1417.0 11 1371.0 12 1325.0 13 1252.0 14 1179.0 15 1117.0 16 1055.0 17 1021.5 18 988.0 19 1001.5 20 1015.0 21 1113.5 22 1212.0 23 1426.5 24 1641.0 25 1938.5 26 2608.0 27 2980.0 28 3785.0 29 4590.0 30 5112.5 31 5635.0 32 6614.5 33 7594.0 34 8676.5 35 9759.0 36 10403.0 37 11047.0 38 11698.5 39 12350.0 40 13446.5 41 14543.0 42 15434.5 43 16326.0 44 17482.0 45 18638.0 46 20143.0 47 21648.0 48 22144.0 49 22640.0 50 22281.0 51 21922.0 52 20269.0 53 18616.0 54 17433.0 55 16250.0 56 15325.0 57 14400.0 58 13434.0 59 12468.0 60 11477.5 61 10487.0 62 9198.5 63 7910.0 64 6718.5 65 5527.0 66 4626.0 67 3725.0 68 3078.5 69 2432.0 70 1933.5 71 1435.0 72 1212.5 73 990.0 74 796.5 75 483.5 76 364.0 77 290.0 78 216.0 79 166.5 80 117.0 81 87.0 82 57.0 83 49.5 84 42.0 85 35.5 86 29.0 87 22.0 88 15.0 89 10.0 90 5.0 91 5.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 287973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.18184910364663 #Duplication Level Percentage of deduplicated Percentage of total 1 68.22050858512839 33.55210759007814 2 11.53076380600699 11.342085711136518 3 6.445507182666743 9.510058849631589 4 4.09415024093201 8.054315174287066 5 2.8518897302841286 7.013060518753676 6 1.9132722319372422 5.645895972320079 7 1.412089045755099 4.861440525846775 8 1.020348047107042 4.014608294881525 9 0.7072075392293214 3.1303597031403974 >10 1.7901793720852894 10.999576065412796 >50 0.008450531320682735 0.2763824829125396 >100 0.004225265660341367 0.2950850569442152 >500 7.042109433902281E-4 0.19395261958774707 >1k 7.042109433902281E-4 1.111071435066951 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3208 1.113993325763179 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 560 0.19446267532025574 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06146409559229511 0.0 2 0.0 0.0 0.0 0.22918815305601567 0.0 3 0.0 0.0 0.0 0.3403096818104475 0.0 4 0.0 0.0 0.0 0.4403190576894362 0.0 5 0.0 0.0 0.0 0.734443854111323 0.0 6 0.0 0.0 0.0 1.0587798161633208 0.0 7 0.0 0.0 0.0 1.3501265743663469 0.0 8 0.0 0.0 0.0 1.9685873328402315 0.0 9 0.0 0.0 0.0 2.354040135707167 0.0 10 0.0 0.0 0.0 2.9461095311018743 0.0 11 0.0 0.0 0.0 3.5215106971834165 0.0 12 0.0 0.0 0.0 4.000375035159546 0.0 13 0.0 0.0 0.0 4.256301806072097 0.0 14 0.0 0.0 0.0 4.404579596003792 0.0 15 3.472547773575995E-4 0.0 0.0 4.564316793588288 0.0 16 3.472547773575995E-4 0.0 0.0 4.8504547301309495 0.0 17 3.472547773575995E-4 0.0 0.0 5.167845596635796 0.0 18 3.472547773575995E-4 0.0 0.0 5.503988221117952 0.0 19 3.472547773575995E-4 0.0 0.0 5.719633437857022 0.0 20 3.472547773575995E-4 0.0 0.0 5.958891979456407 0.0 21 3.472547773575995E-4 0.0 0.0 6.2502387376594335 0.0 22 3.472547773575995E-4 0.0 0.0 6.565546075500134 0.0 23 3.472547773575995E-4 0.0 0.0 6.873561063016324 0.0 24 3.472547773575995E-4 0.0 0.0 7.135043910366597 0.0 25 3.472547773575995E-4 0.0 0.0 7.3545089296566 0.0 26 3.472547773575995E-4 0.0 0.0 7.575015713278676 0.0 27 3.472547773575995E-4 0.0 0.0 7.794827987346036 0.0 28 3.472547773575995E-4 0.0 0.0 8.024363395179408 0.0 29 3.472547773575995E-4 0.0 0.0 8.266399974997656 0.0 30 6.94509554715199E-4 0.0 0.0 8.562608300083689 0.0 31 6.94509554715199E-4 0.0 0.0 8.833814281199974 0.0 32 6.94509554715199E-4 0.0 0.0 9.085573994784234 0.0 33 6.94509554715199E-4 0.0 0.0 9.330388612821341 0.0 34 6.94509554715199E-4 0.0 0.0 9.617568313696076 0.0 35 6.94509554715199E-4 0.0 0.0 9.889468804367077 0.0 36 6.94509554715199E-4 0.0 0.0 10.171786938358805 0.0 37 6.94509554715199E-4 0.0 0.0 10.422504887610991 0.0 38 6.94509554715199E-4 0.0 0.0 10.7336451681234 0.0 39 6.94509554715199E-4 0.0 0.0 11.139933257631792 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTACGG 20 7.0244714E-4 45.000004 2 GTATGCG 20 7.0244714E-4 45.000004 1 TATCGCG 20 7.0244714E-4 45.000004 1 CCCGTGA 25 3.883501E-5 45.0 37 TAGGCGA 25 3.883501E-5 45.0 6 CACGACG 65 0.0 44.999996 26 CGTTTTT 1150 0.0 43.630436 1 TCTCACG 80 0.0 42.187504 23 TCACGAC 75 0.0 42.000004 25 GCGATAA 40 3.4462028E-7 39.375004 9 CGTTTTA 225 0.0 39.0 1 AGGCGAT 110 0.0 38.863636 7 GCGATTT 35 6.231994E-6 38.571426 9 CGGGATA 65 9.094947E-12 38.07692 6 AGTTGCG 30 1.1377984E-4 37.499996 1 CGGGCTA 30 1.1377984E-4 37.499996 6 CGATGTT 30 1.1377984E-4 37.499996 10 TCGACGG 30 1.1377984E-4 37.499996 2 CTCACGA 85 0.0 37.058823 24 ATAGGGC 80 0.0 36.562504 4 >>END_MODULE