SRR2936365.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936365.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	136188
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	488	0.35832819337973976	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	263	0.1931153993009663	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	217	0.15933856140041708	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTC	194	0.14245014245014245	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCG	191	0.1402473051957588	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGC	178	0.13070167709342967	No Hit
CTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGCT	146	0.10720474638000412	No Hit
CCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	137	0.10059623461685317	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.0113706E-4	45.000004	25
AGTCCTA	20	7.0113706E-4	45.000004	31
CTCACGA	20	7.0113706E-4	45.000004	24
GGCACCG	30	2.1513788E-6	45.000004	8
CACGACG	20	7.0113706E-4	45.000004	26
GCTTGCG	20	7.0113706E-4	45.000004	1
CTTGCGG	20	7.0113706E-4	45.000004	2
CTCATGC	30	2.1513788E-6	45.000004	23
TCACTCA	20	7.0113706E-4	45.000004	32
GGGCCAC	20	7.0113706E-4	45.000004	7
CAATGGT	20	7.0113706E-4	45.000004	13
TAAGGAT	40	6.7393557E-9	45.000004	5
CGGTCTA	20	7.0113706E-4	45.000004	31
GCGGAAG	20	7.0113706E-4	45.000004	1
ACGGTCT	20	7.0113706E-4	45.000004	30
CCGGGGT	25	3.872653E-5	45.0	5
GTATTGG	25	3.872653E-5	45.0	2
CGAATAT	55	1.8189894E-12	45.0	14
TAGGGCG	25	3.872653E-5	45.0	5
ATTGGGC	25	3.872653E-5	45.0	4