SRR2936364.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936364.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	260175
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3938	1.5135966176611897	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTT	788	0.30287306620543863	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	602	0.23138272316709907	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCT	474	0.1821850677428654	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	474	0.1821850677428654	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	460	0.17680407418083982	No Hit
CGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTG	272	0.10454501777649658	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTGCGG	45	3.8198777E-10	45.000004	2
AAGGATC	60	0.0	45.000004	6
TCACGAC	25	3.8824604E-5	45.0	25
GTTTGCG	25	3.8824604E-5	45.0	1
CGACGGT	25	3.8824604E-5	45.0	28
CGGTTTT	175	0.0	45.0	1
TTAGACT	20	7.0232165E-4	45.0	27
GGATCGA	25	3.8824604E-5	45.0	8
CTGCGCG	20	7.0232165E-4	45.0	28
CGCTAGG	25	3.8824604E-5	45.0	2
GACGGTC	25	3.8824604E-5	45.0	29
CTTAGCG	20	7.0232165E-4	45.0	1
ATCGCGG	20	7.0232165E-4	45.0	2
GACTAAC	20	7.0232165E-4	45.0	9
CGTTTTT	1605	0.0	44.018692	1
CGTTCTG	100	0.0	42.75	1
CACGGGA	70	0.0	41.785717	4
ACACGGG	55	6.002665E-11	40.90909	3
TGCGGGC	50	1.0750227E-9	40.5	4
ATAGCGG	45	1.9184881E-8	40.000004	2