SRR2936363.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936363.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	80044
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	332	0.4147718754684923	No Hit
GCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	294	0.3672979861076408	No Hit
CCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	226	0.2823447104092749	No Hit
CTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGCT	205	0.2561091399730148	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	125	0.1561641097396432	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG	95	0.11868472340212882	No Hit
GAATCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC	92	0.1149367847683774	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGC	89	0.11118884613462594	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	83	0.10369296886712308	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATGTA	30	2.1401866E-6	45.000004	8
GCCACCG	30	2.1401866E-6	45.000004	9
CGGACGG	30	2.1401866E-6	45.000004	2
TGTCACT	50	2.1827873E-11	45.0	3
TTAGGAT	25	3.8582442E-5	45.0	5
GGAATAA	20	6.993958E-4	45.0	8
CTCACGT	25	3.8582442E-5	45.0	45
GTACAGG	20	6.993958E-4	45.0	2
CGAAAGG	20	6.993958E-4	45.0	3
CGACGGT	25	3.8582442E-5	45.0	28
CCCTAGC	45	3.7471182E-10	45.0	21
CGGTTTT	20	6.993958E-4	45.0	1
GCAACAA	20	6.993958E-4	45.0	9
AATGGGC	20	6.993958E-4	45.0	4
GGATAGC	20	6.993958E-4	45.0	8
TGTTGTG	20	6.993958E-4	45.0	13
TCGGACG	20	6.993958E-4	45.0	1
GGGACCA	40	6.679329E-9	45.0	7
ATATAGG	25	3.8582442E-5	45.0	2
GTCACTT	50	2.1827873E-11	45.0	4