##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936363.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 80044 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.688583778921593 31.0 31.0 34.0 30.0 34.0 2 31.807968117535356 31.0 31.0 34.0 30.0 34.0 3 31.656538903603018 31.0 31.0 34.0 30.0 34.0 4 35.48597021638099 37.0 35.0 37.0 33.0 37.0 5 35.61466193593524 37.0 35.0 37.0 33.0 37.0 6 35.621583129278896 37.0 35.0 37.0 33.0 37.0 7 26.974014292139323 35.0 17.0 37.0 0.0 37.0 8 31.240592674029283 35.0 25.0 37.0 17.0 37.0 9 35.89460796561891 39.0 32.0 39.0 32.0 39.0 10 36.454237669281895 37.0 35.0 39.0 32.0 39.0 11 36.87790465244116 39.0 37.0 39.0 33.0 39.0 12 36.94256908700215 39.0 35.0 39.0 33.0 39.0 13 36.793326170606164 39.0 35.0 39.0 33.0 39.0 14 37.82697016640847 40.0 37.0 41.0 33.0 41.0 15 37.94697916146119 40.0 37.0 41.0 33.0 41.0 16 37.910799060516716 40.0 37.0 41.0 33.0 41.0 17 37.85815301584129 40.0 36.0 41.0 33.0 41.0 18 37.78483084303633 39.0 36.0 41.0 33.0 41.0 19 37.65381540152916 39.0 36.0 41.0 33.0 41.0 20 37.704225176153116 39.0 36.0 41.0 33.0 41.0 21 37.638049073009846 39.0 36.0 41.0 33.0 41.0 22 37.66965668882115 39.0 36.0 41.0 33.0 41.0 23 37.624031782519616 39.0 36.0 41.0 33.0 41.0 24 37.595247613812404 39.0 36.0 41.0 33.0 41.0 25 37.51724051771526 39.0 35.0 41.0 33.0 41.0 26 37.38375143670981 39.0 35.0 41.0 33.0 41.0 27 37.304420068962074 39.0 35.0 41.0 32.0 41.0 28 37.30769326870222 39.0 35.0 41.0 32.0 41.0 29 37.2876667832692 39.0 35.0 41.0 32.0 41.0 30 37.18598520813553 39.0 35.0 41.0 32.0 41.0 31 37.09652191294788 39.0 35.0 41.0 32.0 41.0 32 36.94807855679376 39.0 35.0 40.0 31.0 41.0 33 36.84046274548998 39.0 35.0 40.0 31.0 41.0 34 36.6164234670931 39.0 35.0 40.0 30.0 41.0 35 36.48806906201589 39.0 35.0 40.0 30.0 41.0 36 36.30921743041327 39.0 35.0 40.0 30.0 41.0 37 36.1266178601769 38.0 35.0 40.0 30.0 41.0 38 36.05199640197891 38.0 35.0 40.0 30.0 41.0 39 36.07781969916546 38.0 35.0 40.0 30.0 41.0 40 35.80859277397431 38.0 35.0 40.0 29.0 41.0 41 35.79327619809105 38.0 35.0 40.0 29.0 41.0 42 35.66369746639349 38.0 35.0 40.0 28.0 41.0 43 35.541539653190746 38.0 35.0 40.0 27.0 41.0 44 35.22249013042826 38.0 34.0 40.0 26.0 41.0 45 35.16397231522662 38.0 34.0 40.0 26.0 41.0 46 35.06508920093948 38.0 34.0 40.0 25.0 41.0 47 34.857116086152615 38.0 34.0 40.0 24.0 41.0 48 34.72452651041927 38.0 34.0 40.0 23.0 41.0 49 34.520326320523715 38.0 33.0 40.0 23.0 41.0 50 34.17947628804158 37.0 33.0 40.0 22.0 41.0 51 31.911386237569335 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 1.0 11 1.0 12 2.0 13 0.0 14 0.0 15 3.0 16 7.0 17 19.0 18 25.0 19 53.0 20 76.0 21 127.0 22 227.0 23 322.0 24 493.0 25 666.0 26 889.0 27 1073.0 28 1308.0 29 1565.0 30 1807.0 31 2351.0 32 3028.0 33 3985.0 34 6001.0 35 7768.0 36 8027.0 37 11595.0 38 14705.0 39 13915.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.597521363250216 22.866173604517513 26.033181750037482 12.503123282194792 2 28.233221728049575 26.572884913297685 28.91659587227025 16.277297486382487 3 29.333866373494576 24.568987057118584 30.843036330018492 15.254110239368348 4 26.25181150367298 26.68032582079856 30.486982159812104 16.580880515716355 5 23.57328469341862 30.393283693968314 28.17325470990955 17.86017690270351 6 23.495827294987755 34.709659687172056 26.60911498675728 15.185398031082906 7 61.15011743541052 26.915196641846983 7.68577282494628 4.248913097796212 8 81.740042976363 4.031532657038628 8.68397381440208 5.544450552196293 9 75.9182449652691 7.0698615761331265 11.326270551196842 5.685622907400929 10 33.61651091899455 36.5923741941932 16.783269201938932 13.00784568487332 11 26.941432212283246 25.593423617010647 29.17145569936535 18.293688471340765 12 26.083154265154164 21.93168757183549 32.76822747488881 19.216930688121533 13 22.151566638348907 28.259457298485835 32.93063814901804 16.65833791414722 14 17.36295037729249 31.778771675578433 29.41632102343711 21.44195692369197 15 14.595722352706012 27.037629303882866 39.402078856628854 18.96456948678227 16 17.180550697116587 26.306781270301332 34.48103543051322 22.03163260206886 17 18.899605217130578 25.229873569536753 29.942281745040226 25.928239468292443 18 19.0832542101844 25.041227324971267 35.06321523162261 20.812303233221726 19 20.05022237769227 28.591774524011793 29.729898555794314 21.628104542501625 20 21.516915696366997 27.677277497376444 30.618160011993407 20.187646794263156 21 19.657938134026285 28.544300634650945 32.36095147668782 19.43680975463495 22 17.289240917495377 26.15436509919544 30.498225975713357 26.05816800759582 23 15.006746289540754 27.923392134326118 31.607615811303784 25.462245764829344 24 17.841437209534757 25.96696816750787 33.12553095797311 23.06606366498426 25 16.905701863974816 29.26390485233122 30.48073559542252 23.34965768827145 26 15.646394483034332 31.210334316126133 30.428264454549996 22.71500674628954 27 17.149317875168656 30.412023387137076 30.506971165858776 21.93168757183549 28 13.467592823946827 28.89410824046774 34.446054669931534 23.19224426565389 29 15.916246064664435 29.0877517365449 31.898705711858476 23.097296486932187 30 19.6516915696367 30.234620958472842 29.67742741492179 20.436260056968667 31 20.970965968717206 29.470041477187547 28.49682674529009 21.062165808805158 32 21.91544650442257 31.889960521713057 26.436709809604718 19.757883164259656 33 22.984858327919643 28.298185997701264 27.28999050522213 21.426965169156965 34 19.88031582629554 28.200739593223727 29.79611213832392 22.122832442156813 35 19.97651291789516 29.54250162410674 27.3462095847284 23.134775873269703 36 24.399080505721855 28.79791114886812 28.1332766978162 18.669731647593824 37 20.040227874668933 30.595672380190898 30.845534955774323 18.51856478936585 38 21.097146569386837 29.571235820298835 27.83344160711609 21.498176003198243 39 23.938084053770424 26.500424766378494 28.77167557843186 20.78981560141922 40 25.680875518464845 25.9107490880016 28.065813802408673 20.34256159112488 41 22.13282694518015 26.871470691119885 26.749038029084005 24.24666433461596 42 22.756234071260806 26.554145220128927 28.957823197241517 21.731797511368747 43 22.455149667682775 26.90020488731198 29.642446654340116 21.002198790665133 44 20.72485133176753 27.965868772175305 28.69047024136725 22.61880965468992 45 20.45749837589326 27.659787117085603 27.09259907051122 24.790115436509918 46 24.542751486682324 27.29373844385588 27.97461396232072 20.188896107141073 47 20.473739443306183 26.214332117335466 31.621358252960874 21.69057018639748 48 21.107141072410172 25.366048673229724 30.763080305831792 22.76372994852831 49 22.341462195792314 22.428914097246512 32.56209085003248 22.66753285692869 50 21.41072410174404 23.059817100594675 31.230323322172804 24.29913547548848 51 21.00344810354305 23.430863025336066 27.80470741092399 27.76098146019689 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 64.0 1 103.0 2 142.0 3 363.0 4 584.0 5 418.0 6 252.0 7 233.0 8 214.0 9 224.5 10 235.0 11 242.5 12 250.0 13 257.5 14 265.0 15 267.0 16 269.0 17 286.5 18 304.0 19 293.5 20 283.0 21 296.5 22 310.0 23 344.0 24 378.0 25 454.5 26 678.5 27 826.0 28 1034.0 29 1242.0 30 1483.5 31 1725.0 32 1964.5 33 2204.0 34 2463.5 35 2723.0 36 2972.5 37 3222.0 38 3495.0 39 3768.0 40 4259.5 41 4751.0 42 5523.5 43 6296.0 44 6946.0 45 7596.0 46 8623.5 47 9651.0 48 9924.0 49 10197.0 50 9125.0 51 8053.0 52 6328.5 53 4604.0 54 3696.5 55 2789.0 56 2344.5 57 1900.0 58 1636.5 59 1373.0 60 1163.0 61 953.0 62 837.0 63 721.0 64 619.0 65 517.0 66 414.5 67 312.0 68 281.5 69 251.0 70 187.5 71 124.0 72 92.0 73 60.0 74 49.0 75 28.0 76 18.0 77 21.5 78 25.0 79 19.5 80 14.0 81 8.5 82 3.0 83 3.0 84 3.0 85 2.0 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 80044.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.043775923242215 #Duplication Level Percentage of deduplicated Percentage of total 1 77.69408180106218 45.873519564239665 2 9.968049766191998 11.771025935735345 3 4.223355409322697 7.480885512967868 4 2.3952095808383236 5.656888711208835 5 1.5319184951651468 4.522512618060067 6 1.0643024904255094 3.770426265553945 7 0.7659592475825734 3.1657588326420467 8 0.6072660333044159 2.8684223676977663 9 0.46126827616851107 2.4511518664734395 >10 1.2568502570830071 10.063215231622607 >50 0.021159095237087665 0.8995052721003448 >100 0.010579547618543832 1.476687821698066 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 332 0.4147718754684923 No Hit GCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 294 0.3672979861076408 No Hit CCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 226 0.2823447104092749 No Hit CTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGCT 205 0.2561091399730148 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 125 0.1561641097396432 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG 95 0.11868472340212882 No Hit GAATCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC 92 0.1149367847683774 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGC 89 0.11118884613462594 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 83 0.10369296886712308 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.36105142171805504 0.0 2 0.0 0.0 0.0 1.6803258207985607 0.0 3 0.0 0.0 0.0 2.225026235570436 0.0 4 0.0 0.0 0.0 2.830942981360252 0.0 5 0.0 0.0 0.0 4.531257808205487 0.0 6 0.0 0.0 0.0 5.389535755334566 0.0 7 0.0 0.0 0.0 6.307780720603668 0.0 8 0.0 0.0 0.0 8.262955374544001 0.0 9 0.0 0.0 0.0 8.988806156613862 0.0 10 0.0 0.0 0.0 11.00769576732797 0.0 11 0.0 0.0 0.0 13.311428714207185 0.0 12 0.0 0.0 0.0 15.196641846984159 0.0 13 0.0 0.0 0.0 15.959972015391534 0.0 14 0.0 0.0 0.0 16.26730298335915 0.0 15 0.0 0.0 0.0 16.85073209734646 0.0 16 0.0 0.0 0.0 18.02758482834441 0.0 17 0.0 0.0 0.0 19.55924241667083 0.0 18 0.0 0.0 0.0 21.290790065463995 0.0 19 0.0 0.0 0.0 22.21278296936685 0.0 20 0.0 0.0 0.0 23.10978961571136 0.0 21 0.0 0.0 0.0 24.1767028134526 0.0 22 0.0 0.0 0.0 25.298585777822197 0.0 23 0.0 0.0 0.0 26.486682324721404 0.0 24 0.0 0.0 0.0 27.342461646094648 0.0 25 0.0 0.0 0.0 28.03707960621658 0.0 26 0.0 0.0 0.0 28.660486732297237 0.0 27 0.0 0.0 0.0 29.313877367447905 0.0 28 0.0 0.0 0.0 29.959772125331067 0.0 29 0.0 0.0 0.0 30.665633901354255 0.0 30 0.0 0.0 0.0 31.450202388686222 0.0 31 0.0 0.0 0.0 32.17855179651192 0.0 32 0.0 0.0 0.0 32.80320823547049 0.0 33 0.0 0.0 0.0 33.40287841687072 0.0 34 0.0 0.0 0.0 34.07625805806806 0.0 35 0.0 0.0 0.0 34.77712258257958 0.0 36 0.0 0.0 0.0 35.36429963520064 0.0 37 0.0 0.0 0.0 35.89775623407126 0.0 38 0.0 0.0 0.0 36.519914047274 0.0 39 0.0 0.0 0.0 37.220778571785516 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGATGTA 30 2.1401866E-6 45.000004 8 GCCACCG 30 2.1401866E-6 45.000004 9 CGGACGG 30 2.1401866E-6 45.000004 2 TGTCACT 50 2.1827873E-11 45.0 3 TTAGGAT 25 3.8582442E-5 45.0 5 GGAATAA 20 6.993958E-4 45.0 8 CTCACGT 25 3.8582442E-5 45.0 45 GTACAGG 20 6.993958E-4 45.0 2 CGAAAGG 20 6.993958E-4 45.0 3 CGACGGT 25 3.8582442E-5 45.0 28 CCCTAGC 45 3.7471182E-10 45.0 21 CGGTTTT 20 6.993958E-4 45.0 1 GCAACAA 20 6.993958E-4 45.0 9 AATGGGC 20 6.993958E-4 45.0 4 GGATAGC 20 6.993958E-4 45.0 8 TGTTGTG 20 6.993958E-4 45.0 13 TCGGACG 20 6.993958E-4 45.0 1 GGGACCA 40 6.679329E-9 45.0 7 ATATAGG 25 3.8582442E-5 45.0 2 GTCACTT 50 2.1827873E-11 45.0 4 >>END_MODULE