SRR2936362.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936362.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	261771
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1742	0.6654671449473013	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	311	0.11880613207727365	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTGA	25	3.8825263E-5	45.0	24
CGTTGAT	25	3.8825263E-5	45.0	25
GACGGTC	45	3.8198777E-10	45.0	29
ACGTAAG	25	3.8825263E-5	45.0	2
CGGTTTT	85	0.0	42.35294	1
TAGGAGT	75	0.0	42.000004	6
GGATTAT	65	0.0	41.538464	8
CGTTTTT	815	0.0	41.13497	1
ACTAACC	55	6.002665E-11	40.909092	14
CGTTTTA	110	0.0	40.909092	1
CGACGGT	50	1.0750227E-9	40.5	28
CACGACG	50	1.0750227E-9	40.5	26
CGGTCTA	50	1.0750227E-9	40.5	31
ACGACGG	50	1.0750227E-9	40.5	27
GCGATTG	45	1.9184881E-8	40.0	9
GTTTGCG	40	3.444602E-7	39.375	1
AGGATAC	35	6.2298186E-6	38.571426	7
TTACACG	170	0.0	38.38235	34
TTAATCG	30	1.1375147E-4	37.500004	20
ATCGTTG	30	1.1375147E-4	37.500004	23