SRR2936361.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936361.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102296
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	378	0.36951591460076644	No Hit
GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	209	0.20430906389301637	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	183	0.17889262532259326	No Hit
CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT	137	0.13392508015953702	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGC	126	0.1231719715335888	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCG	121	0.11828419488543053	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTC	117	0.11437397356690389	No Hit
TCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	109	0.10655353092985063	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	25	3.8658407E-5	45.0	25
TTGATTC	20	7.0031435E-4	45.0	43
GTTGAAT	25	3.8658407E-5	45.0	35
TAATATC	35	1.1974771E-7	45.0	21
GATACTA	20	7.0031435E-4	45.0	1
GGTGTTC	40	6.710252E-9	45.0	9
AGGAGCC	20	7.0031435E-4	45.0	7
CGACGGT	25	3.8658407E-5	45.0	28
ACCGATT	20	7.0031435E-4	45.0	10
ACCTGTA	20	7.0031435E-4	45.0	14
GTCTCAC	25	3.8658407E-5	45.0	22
CTAAGGA	35	1.1974771E-7	45.0	4
CACGACG	25	3.8658407E-5	45.0	26
AGGCGAT	55	1.8189894E-12	45.0	7
ATATCAG	20	7.0031435E-4	45.0	1
CTAAAGC	20	7.0031435E-4	45.0	5
CTACGAA	20	7.0031435E-4	45.0	11
TACGAAT	20	7.0031435E-4	45.0	12
TACTGGA	20	7.0031435E-4	45.0	15
GGGAACG	25	3.8658407E-5	45.0	7