SRR2936360.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936360.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	214758
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1224	0.5699438437683345	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTAGT	30	2.1572341E-6	45.000004	12
CGGTTTA	20	7.020465E-4	45.0	1
ATGTACG	20	7.020465E-4	45.0	1
GGAACGA	20	7.020465E-4	45.0	8
AACGAGC	40	6.7702786E-9	45.0	15
GGACGAC	20	7.020465E-4	45.0	8
GCGATAT	40	6.7702786E-9	45.0	9
GCGATAC	25	3.880182E-5	45.0	9
TGTCGTT	20	7.020465E-4	45.0	25
CGCCACT	20	7.020465E-4	45.0	25
GGCGATA	110	0.0	42.954544	8
CGTTTTT	535	0.0	42.056072	1
CGTTTTA	120	0.0	41.250004	1
CTCGTAA	55	6.002665E-11	40.909092	33
TCGTAAC	55	6.002665E-11	40.909092	34
CGTAACC	55	6.002665E-11	40.909092	35
AGCGACT	45	1.9157596E-8	40.0	19
TGTACGG	45	1.9157596E-8	40.0	2
CGCATGG	40	3.4407458E-7	39.375	2
CGAAGGA	40	3.4407458E-7	39.375	4