##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936360.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 214758 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94585533484201 33.0 31.0 34.0 30.0 34.0 2 32.077100736643104 33.0 31.0 34.0 30.0 34.0 3 31.81126663500312 33.0 31.0 34.0 30.0 34.0 4 35.64510285996331 37.0 35.0 37.0 33.0 37.0 5 35.793446577077454 37.0 35.0 37.0 35.0 37.0 6 35.77994766201957 37.0 35.0 37.0 35.0 37.0 7 26.901270266998203 35.0 11.0 37.0 0.0 37.0 8 31.23573976289591 36.0 19.0 37.0 17.0 37.0 9 36.027328434796374 39.0 32.0 39.0 32.0 39.0 10 36.643915476955456 38.0 35.0 39.0 32.0 39.0 11 37.13726147570754 39.0 37.0 39.0 34.0 39.0 12 37.23372819638849 39.0 37.0 39.0 34.0 39.0 13 37.27165460658043 39.0 37.0 39.0 34.0 39.0 14 38.48019631399063 40.0 38.0 41.0 34.0 41.0 15 38.55695247674126 40.0 38.0 41.0 34.0 41.0 16 38.45758015999404 40.0 38.0 41.0 34.0 41.0 17 38.373383063727545 40.0 38.0 41.0 34.0 41.0 18 38.231162517810745 40.0 38.0 41.0 34.0 41.0 19 38.09585207535924 40.0 37.0 41.0 34.0 41.0 20 38.13388092643813 40.0 37.0 41.0 34.0 41.0 21 38.07182968736904 40.0 37.0 41.0 34.0 41.0 22 38.092895258849495 40.0 37.0 41.0 34.0 41.0 23 38.004051071438546 40.0 37.0 41.0 34.0 41.0 24 37.96905353933264 40.0 37.0 41.0 33.0 41.0 25 37.85910187280567 40.0 36.0 41.0 33.0 41.0 26 37.770802484657146 40.0 36.0 41.0 33.0 41.0 27 37.636684081617446 40.0 36.0 41.0 33.0 41.0 28 37.62283127985919 40.0 36.0 41.0 33.0 41.0 29 37.623972098827515 40.0 36.0 41.0 33.0 41.0 30 37.543099674983004 40.0 36.0 41.0 33.0 41.0 31 37.44006742472923 40.0 36.0 41.0 33.0 41.0 32 37.28394751301465 40.0 36.0 41.0 32.0 41.0 33 37.13877480699205 40.0 36.0 41.0 31.0 41.0 34 36.98484340513508 40.0 36.0 41.0 31.0 41.0 35 36.85240130751823 40.0 36.0 41.0 31.0 41.0 36 36.66341184030397 39.0 35.0 41.0 30.0 41.0 37 36.557823224280355 39.0 35.0 41.0 30.0 41.0 38 36.42888739883963 39.0 35.0 41.0 30.0 41.0 39 36.381424673353266 39.0 35.0 41.0 30.0 41.0 40 36.20978496726548 39.0 35.0 41.0 29.0 41.0 41 36.12492666163775 39.0 35.0 41.0 29.0 41.0 42 36.03572858752643 39.0 35.0 41.0 28.0 41.0 43 35.98602147533503 39.0 35.0 40.0 28.0 41.0 44 35.78907421376619 39.0 35.0 40.0 27.0 41.0 45 35.69201147337934 39.0 35.0 40.0 27.0 41.0 46 35.56240512576947 39.0 35.0 40.0 26.0 41.0 47 35.454823568854245 38.0 35.0 40.0 26.0 41.0 48 35.35267137894747 38.0 34.0 40.0 26.0 41.0 49 35.215828979595635 38.0 34.0 40.0 25.0 41.0 50 34.993830264763126 38.0 34.0 40.0 24.0 41.0 51 32.808784771696516 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 12.0 10 16.0 11 8.0 12 5.0 13 4.0 14 3.0 15 13.0 16 14.0 17 29.0 18 69.0 19 109.0 20 193.0 21 375.0 22 560.0 23 859.0 24 1298.0 25 1859.0 26 2510.0 27 2884.0 28 3034.0 29 3545.0 30 4139.0 31 5082.0 32 6437.0 33 8725.0 34 12840.0 35 16446.0 36 19956.0 37 32402.0 38 42822.0 39 48491.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.600191843842836 21.12889857420911 26.65232494249341 13.618584639454642 2 31.719423723446855 24.779984913251194 26.863260041535124 16.637331321766826 3 30.315052291416382 24.539248828914406 28.86691066223377 16.278788217435437 4 27.117034056938504 26.27096545879548 28.99449613052831 17.617504353737694 5 24.720382942661043 30.62935955820039 26.816696002011565 17.833561497126997 6 25.501261885471088 34.600340848769314 26.502854375622793 13.395542890136806 7 61.82819731977388 27.46207358980806 7.109397554456644 3.6003315359614074 8 84.3200253308375 4.504139543113644 7.900054945566638 3.275780180482217 9 77.31958762886599 8.495143370677694 9.678335614971271 4.506933385485057 10 31.835368181860513 37.65773568388605 17.548123934847595 12.958772199405843 11 29.190065096527253 25.567848461989772 27.185483195038135 18.056603246444837 12 25.571573585151658 24.124363236759518 30.301548719954553 20.00251445813427 13 23.920878384041572 24.678009666694606 32.0891421972639 19.311969751999925 14 21.385466431983907 27.458814107041412 30.76998295756154 20.385736503413142 15 20.911910150029335 26.27096545879548 33.41249220052338 19.404632190651803 16 23.916687620484453 26.308682330809564 30.785814730999544 18.988815317706443 17 23.87291742333231 25.108261391892267 29.919723595861385 21.099097588914034 18 23.962320379217537 25.410462008400152 30.494323843582077 20.13289376880023 19 23.55767887575783 27.140781717095518 28.351446744708 20.950092662438653 20 23.912962497322567 27.24275696365211 29.452220639044878 19.392059899980442 21 23.526946609672283 26.416710902504214 30.746235297404525 19.310107190418982 22 23.685264344052374 24.526676538243045 29.462464727740063 22.325594389964518 23 20.94310805651012 27.043928514886524 29.86710623119977 22.14585719740359 24 21.24763687499418 26.24069883310517 30.55020069101035 21.961463600890305 25 20.9952597807765 28.078115832704718 29.700406969705433 21.22621741681334 26 21.227148697603816 27.6366887380214 29.26410191936971 21.872060645005075 27 21.309101407165272 27.21481853993798 29.947196379180284 21.52888367371646 28 20.158503990538186 27.272092308551954 31.256577170582702 21.312826530327158 29 20.494230715503033 26.15641792156753 30.861714115422938 22.487637247506495 30 20.799690814777563 26.00555043351121 31.311057096825262 21.883701654885964 31 21.959135398914125 26.80645191331638 29.087158569180193 22.147254118589295 32 21.674629117425194 26.807383194106855 29.480159062759014 22.03782862570894 33 21.313292170722395 26.632768045893517 29.649186526229528 22.404753257154564 34 20.1547788673763 27.341007087046815 30.16325352256959 22.34096052300729 35 20.707959656916156 26.496335410089493 30.16325352256959 22.632451410424757 36 21.10468527365686 28.126076793413983 29.044319652818523 21.724918280110636 37 20.395049311317855 27.683252777544958 30.3243650993211 21.59733281181609 38 20.802019016753743 29.033144283332867 28.60009871576379 21.564737984149602 39 20.67303662727349 27.184086273852433 29.122081598822863 23.020795500051218 40 21.986608182233024 26.599241937436556 29.07924268246119 22.33490719786923 41 20.523100420007637 26.249080360219413 28.902299332271674 24.325519887501283 42 21.333314707717523 26.730086888497752 28.902299332271674 23.03429907151305 43 21.45857197403589 26.12615129587722 29.327429013121748 23.087847716965143 44 20.642770001583177 27.456485905065236 29.02010635226627 22.880637741085312 45 20.167816798442896 26.91820560817292 29.58027174773466 23.333705845649522 46 21.42923662913605 27.25160413116159 28.754691326981995 22.564467912720364 47 20.533810149098056 26.288194153419198 30.153940714664877 23.02405498281787 48 20.498421479060152 26.605760902969855 29.662224457296123 23.233593160673873 49 21.23832406708947 25.3848517866622 30.269885173078535 23.1069389731698 50 20.513787612102924 25.67215191052254 30.169772488102886 23.644287989271646 51 20.368042168394194 25.65538885629406 29.00101509606161 24.975553879250132 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 36.0 1 126.0 2 216.0 3 1368.5 4 2521.0 5 1787.5 6 1054.0 7 900.0 8 746.0 9 716.0 10 686.0 11 676.0 12 666.0 13 667.0 14 668.0 15 650.5 16 633.0 17 645.5 18 658.0 19 635.0 20 612.0 21 730.0 22 848.0 23 942.5 24 1037.0 25 1266.5 26 1910.0 27 2324.0 28 2594.0 29 2864.0 30 3441.0 31 4018.0 32 4691.5 33 5365.0 34 6091.5 35 6818.0 36 7745.0 37 8672.0 38 9524.5 39 10377.0 40 11162.0 41 11947.0 42 13273.0 43 14599.0 44 15713.0 45 16827.0 46 18035.0 47 19243.0 48 19542.5 49 19842.0 50 19157.5 51 18473.0 52 16788.5 53 15104.0 54 13359.0 55 11614.0 56 10382.0 57 9150.0 58 8330.0 59 7510.0 60 6637.0 61 5764.0 62 5006.5 63 4249.0 64 3557.5 65 2866.0 66 2446.0 67 2026.0 68 1611.0 69 1196.0 70 981.0 71 766.0 72 627.0 73 488.0 74 395.5 75 250.0 76 197.0 77 166.5 78 136.0 79 100.5 80 65.0 81 48.0 82 31.0 83 30.0 84 29.0 85 18.0 86 7.0 87 6.5 88 6.0 89 3.5 90 1.0 91 0.5 92 0.0 93 1.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 214758.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.08151219879747 #Duplication Level Percentage of deduplicated Percentage of total 1 68.0597907524411 33.40477450063541 2 11.852452819710797 11.634726153126138 3 6.205243143489768 9.136881511310921 4 3.9866714851574647 7.826874605254165 5 2.723447616270623 6.683546370038624 6 1.9482273143888427 5.737316561832385 7 1.4813620340857256 5.089524212276979 8 1.0244831885173995 4.022654729174374 9 0.8110075323753941 3.5824928484239584 >10 1.8963410721236134 11.652281778089943 >50 0.002992647665254566 0.11114197915259705 >100 0.006982844552260654 0.5184993652977985 >500 0.0 0.0 >1k 9.97549221751522E-4 0.5992853853866906 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1224 0.5699438437683345 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09405935983758464 0.0 2 0.0 0.0 0.0 0.3883440896264633 0.0 3 0.0 0.0 0.0 0.5438679816351428 0.0 4 0.0 0.0 0.0 0.7375743860531389 0.0 5 0.0 0.0 0.0 1.307052589426238 0.0 6 0.0 0.0 0.0 1.6786336248242208 0.0 7 0.0 0.0 0.0 2.07163411840304 0.0 8 0.0 0.0 0.0 2.9083899086413543 0.0 9 0.0 0.0 0.0 3.2911463135249908 0.0 10 0.0 0.0 0.0 4.134886709691839 0.0 11 0.0 0.0 0.0 4.896674396297228 0.0 12 0.0 0.0 0.0 5.623073412864713 0.0 13 0.0 0.0 0.0 5.9331899160916 0.0 14 0.0 0.0 0.0 6.0854543253336315 0.0 15 0.0 0.0 0.0 6.294992503189636 0.0 16 0.0 0.0 0.0 6.729900632339657 0.0 17 0.0 0.0 0.0 7.222548170498887 0.0 18 0.0 0.0 0.0 7.817636595609942 0.0 19 0.0 0.0 0.0 8.167798172827089 0.0 20 0.0 0.0 0.0 8.534722804272716 0.0 21 0.0 0.0 0.0 8.977546820141741 0.0 22 0.0 0.0 0.0 9.472522560277149 0.0 23 0.0 0.0 0.0 9.974482906341091 0.0 24 0.0 0.0 0.0 10.374002365453208 0.0 25 0.0 0.0 0.0 10.718576257927527 0.0 26 0.0 0.0 0.0 11.077119362258914 0.0 27 0.0 0.0 0.0 11.391426629042924 0.0 28 0.0 0.0 0.0 11.735534881122007 0.0 29 0.0 0.0 0.0 12.123413330353236 0.0 30 0.0 0.0 0.0 12.518742025908232 0.0 31 0.0 0.0 0.0 12.909414317510873 0.0 32 0.0 0.0 0.0 13.324765550060999 0.0 33 0.0 0.0 0.0 13.709850156920814 0.0 34 0.0 0.0 0.0 14.101453729313926 0.0 35 0.0 0.0 0.0 14.509820355935519 0.0 36 0.0 0.0 0.0 14.86789781987167 0.0 37 0.0 0.0 0.0 15.245066540012479 0.0 38 0.0 0.0 0.0 15.652967526238836 0.0 39 0.0 0.0 0.0 16.059005950884252 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTAGT 30 2.1572341E-6 45.000004 12 CGGTTTA 20 7.020465E-4 45.0 1 ATGTACG 20 7.020465E-4 45.0 1 GGAACGA 20 7.020465E-4 45.0 8 AACGAGC 40 6.7702786E-9 45.0 15 GGACGAC 20 7.020465E-4 45.0 8 GCGATAT 40 6.7702786E-9 45.0 9 GCGATAC 25 3.880182E-5 45.0 9 TGTCGTT 20 7.020465E-4 45.0 25 CGCCACT 20 7.020465E-4 45.0 25 GGCGATA 110 0.0 42.954544 8 CGTTTTT 535 0.0 42.056072 1 CGTTTTA 120 0.0 41.250004 1 CTCGTAA 55 6.002665E-11 40.909092 33 TCGTAAC 55 6.002665E-11 40.909092 34 CGTAACC 55 6.002665E-11 40.909092 35 AGCGACT 45 1.9157596E-8 40.0 19 TGTACGG 45 1.9157596E-8 40.0 2 CGCATGG 40 3.4407458E-7 39.375 2 CGAAGGA 40 3.4407458E-7 39.375 4 >>END_MODULE