##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936357.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 197746 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.985309437359035 33.0 31.0 34.0 30.0 34.0 2 32.09602722684656 33.0 31.0 34.0 30.0 34.0 3 31.867972044946548 33.0 31.0 34.0 30.0 34.0 4 35.66086798215893 37.0 35.0 37.0 33.0 37.0 5 35.780526534038614 37.0 35.0 37.0 35.0 37.0 6 35.75570681581423 37.0 35.0 37.0 35.0 37.0 7 26.75782569558929 35.0 10.0 37.0 0.0 37.0 8 31.030958906880542 35.0 19.0 37.0 17.0 37.0 9 35.873974694810514 39.0 32.0 39.0 32.0 39.0 10 36.69970568304795 38.0 35.0 39.0 33.0 39.0 11 37.11202755049407 39.0 37.0 39.0 34.0 39.0 12 37.09452024314019 39.0 37.0 39.0 33.0 39.0 13 37.01712297593883 39.0 37.0 39.0 33.0 39.0 14 38.2326924438421 40.0 38.0 41.0 34.0 41.0 15 38.23112983322039 40.0 37.0 41.0 33.0 41.0 16 38.222350894581936 40.0 37.0 41.0 33.0 41.0 17 38.07932903826121 40.0 37.0 41.0 33.0 41.0 18 37.960312724404034 40.0 37.0 41.0 33.0 41.0 19 37.80302509279581 40.0 37.0 41.0 33.0 41.0 20 37.89176013674107 40.0 36.0 41.0 33.0 41.0 21 37.934006250442486 40.0 36.0 41.0 33.0 41.0 22 37.9880452701951 40.0 37.0 41.0 33.0 41.0 23 37.99517562934269 40.0 36.0 41.0 34.0 41.0 24 37.898890495888665 40.0 36.0 41.0 33.0 41.0 25 37.82069422390339 40.0 36.0 41.0 33.0 41.0 26 37.689485501603066 40.0 36.0 41.0 33.0 41.0 27 37.65131532369808 40.0 36.0 41.0 33.0 41.0 28 37.627764910541806 40.0 36.0 41.0 33.0 41.0 29 37.56865372750903 40.0 36.0 41.0 33.0 41.0 30 37.46246194613292 40.0 36.0 41.0 33.0 41.0 31 37.325857413045014 40.0 36.0 41.0 32.0 41.0 32 37.17786453329018 39.0 35.0 41.0 32.0 41.0 33 37.040673389095105 39.0 35.0 41.0 31.0 41.0 34 36.720469693445125 39.0 35.0 41.0 30.0 41.0 35 36.642799348659395 39.0 35.0 41.0 30.0 41.0 36 36.41156331860063 39.0 35.0 41.0 30.0 41.0 37 36.27791206901783 39.0 35.0 41.0 30.0 41.0 38 36.15329260768865 39.0 35.0 41.0 29.0 41.0 39 35.87075339071334 39.0 35.0 40.0 27.0 41.0 40 35.68773072527384 39.0 35.0 40.0 26.0 41.0 41 35.55554094646668 39.0 35.0 40.0 26.0 41.0 42 35.555348780759154 39.0 35.0 40.0 26.0 41.0 43 35.56533128356578 38.0 35.0 40.0 26.0 41.0 44 35.365362636918064 38.0 35.0 40.0 26.0 41.0 45 35.30091632700535 38.0 34.0 40.0 25.0 41.0 46 35.10129155583425 38.0 34.0 40.0 24.0 41.0 47 34.83300294316952 38.0 34.0 40.0 23.0 41.0 48 34.76681197091218 38.0 34.0 40.0 23.0 41.0 49 34.635330171027476 38.0 34.0 40.0 23.0 41.0 50 34.44086353200571 38.0 33.0 40.0 22.0 41.0 51 32.12446269456778 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 5.0 10 9.0 11 9.0 12 7.0 13 4.0 14 5.0 15 8.0 16 19.0 17 53.0 18 93.0 19 158.0 20 215.0 21 353.0 22 569.0 23 848.0 24 1244.0 25 1772.0 26 2428.0 27 2973.0 28 3263.0 29 3785.0 30 4376.0 31 5513.0 32 6614.0 33 8959.0 34 12727.0 35 15595.0 36 18001.0 37 28749.0 38 37328.0 39 42044.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.75838702173495 19.82694972338252 24.86523115511818 12.549432099764344 2 29.951048314504465 29.013481941480485 25.152974017173545 15.882495726841503 3 28.730796071728378 29.116138885236616 27.09435336239418 15.05871168064082 4 25.804820325063467 24.533492460024476 32.21354667098197 17.448140543930094 5 26.719630232722785 28.432433525836174 26.41671639375765 18.43121984768339 6 25.044754381883834 35.73827030635259 25.64198517289857 13.57499013886501 7 59.79842828679215 27.187402020774126 9.526362100876883 3.4878075915568454 8 80.47292992020067 6.9179654708565534 8.946325083693223 3.6627795252495625 9 74.27356305563703 7.2406015798043954 9.748364062989896 8.737471301568679 10 33.97590848866728 36.08922557219868 16.448878864806368 13.485987074327674 11 31.362454866343693 24.258897777957582 25.799763332760207 18.578884022938517 12 28.407148564319883 22.23104386435124 29.64459458092705 19.717212990401826 13 25.007838338070048 23.464444287115796 33.18853478705005 18.339182587764103 14 21.611056607971843 26.86274311490498 30.19782953890344 21.32837073821974 15 20.09851021006746 24.694810514498396 36.43967513881444 18.767004136619704 16 23.904402617499215 26.19876002548724 28.619036541826382 21.27780081518716 17 24.32716717405156 24.440443801644534 29.616781123259127 21.615607901044775 18 24.303905009456575 24.872816643573067 30.155350803556075 20.66792754341428 19 23.139279682016323 26.322150637686732 27.78463281178886 22.753936868508088 20 24.159275029583405 27.24505173303126 30.12399745127588 18.471675786109454 21 24.033861620462613 27.082216580866366 30.08556430977112 18.798357488899903 22 23.037128437490516 22.64672863167902 30.1027580836022 24.213384847228262 23 21.28032931133879 26.826332770321525 30.978629150526434 20.914708767813256 24 23.347122065680214 25.08521032030989 28.683766043308083 22.88390157070181 25 21.519019348052552 29.757365509289695 27.005350297856843 21.718264844800906 26 21.238356275221747 25.459933449981285 28.601842767995304 24.699867506801652 27 22.251777532794595 26.353503989966924 28.461258381964743 22.933460095273738 28 19.39862247529659 25.632882586752704 31.521750123896314 23.446744814054394 29 22.55974836406299 24.996712955002884 30.146753916640538 22.29678476429359 30 22.997178198294783 27.037715048597693 29.726012157009496 20.239094596098024 31 25.60810332446674 24.962831106571056 27.763899143345505 21.6651664256167 32 24.826798013613423 26.696873767358127 26.67816289583607 21.79816532319238 33 24.984576173475066 24.978507782711155 25.782063859698805 24.254852184114974 34 22.16075167133596 27.327480707574363 30.0066752298403 20.50509239124938 35 20.68562701647568 29.808946830782922 27.183862126161845 22.32156402657955 36 24.243726801047806 26.293325781558156 27.830651441748504 21.632295975645523 37 21.06237294306838 28.920433283100543 28.35152164898405 21.665672124847028 38 24.703407401413934 26.991190719407726 25.839207872725616 22.46619400645272 39 23.47809816633459 26.047555955619835 27.21572117767237 23.258624700373208 40 23.82652493602905 26.701930759661387 28.6938800279146 20.777664276394972 41 20.08182213546671 28.35759003974796 27.355294165242285 24.205293659543052 42 21.262629838277388 25.92163684726872 30.7758437591658 22.0398895552881 43 22.39489041497679 24.946648731200632 27.725466001840744 24.932994851981835 44 22.772142040799814 25.0735792380124 28.409171361241185 23.745107359946598 45 20.781709870237577 25.311257876265515 27.627866050387873 26.27916620310904 46 24.01869064355284 26.50774225521629 27.074631092411476 22.398936008819394 47 19.677262751206094 25.794200641226624 32.60242937910249 21.926107228464797 48 21.14884751145409 26.72721572117767 27.945445167032457 24.178491600335782 49 21.272238123653576 24.47685414622799 31.32301032637828 22.927897403740154 50 21.511433859597666 24.88191922971893 29.834737491529538 23.771909419153864 51 21.157444398369627 24.726163866778595 27.999049285446986 26.11734244940479 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 71.0 1 185.5 2 300.0 3 1297.5 4 2295.0 5 1594.5 6 894.0 7 747.5 8 601.0 9 563.0 10 525.0 11 529.0 12 533.0 13 517.5 14 502.0 15 519.5 16 537.0 17 499.5 18 462.0 19 473.0 20 484.0 21 551.0 22 618.0 23 755.0 24 892.0 25 1081.5 26 1569.0 27 1867.0 28 2131.0 29 2395.0 30 2912.5 31 3430.0 32 4002.0 33 4574.0 34 5410.5 35 6247.0 36 6630.5 37 7014.0 38 7624.0 39 8234.0 40 8870.0 41 9506.0 42 10396.5 43 11287.0 44 12710.0 45 14133.0 46 18768.0 47 23403.0 48 19857.5 49 16312.0 50 15778.5 51 15245.0 52 13896.5 53 12548.0 54 11673.0 55 10798.0 56 10205.0 57 9612.0 58 8815.5 59 8019.0 60 7262.0 61 6505.0 62 5775.0 63 5045.0 64 4407.5 65 3770.0 66 3208.0 67 2646.0 68 2213.0 69 1780.0 70 1519.0 71 1258.0 72 1054.0 73 850.0 74 710.0 75 428.0 76 286.0 77 232.5 78 179.0 79 134.0 80 89.0 81 73.5 82 58.0 83 52.5 84 47.0 85 38.0 86 29.0 87 20.5 88 12.0 89 8.5 90 5.0 91 4.5 92 4.0 93 2.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 197746.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.21635835870258 #Duplication Level Percentage of deduplicated Percentage of total 1 67.7944217701962 31.332112912524146 2 11.574443873029074 10.69857291677202 3 6.461248919477848 8.958461865221041 4 4.144828265365299 7.662354737896089 5 2.849295882526726 6.584203978841543 6 1.9980085566412447 5.5404407674491525 7 1.4180827433773566 4.587703417515399 8 1.0438664638749986 3.859496525846288 9 0.7167007692223523 2.9810969627704225 >10 1.9673709665065486 11.684686415907276 >50 0.012036196124344848 0.38787130965986666 >100 0.013130395772012561 1.7219058792592519 >500 0.002188399295335427 0.5638546418132352 >1k 0.004376798590670854 3.4372376685242685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTC 1947 0.9845964014442771 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCG 1933 0.9775166122197162 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGC 1781 0.9006503292101989 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1136 0.5744743256500764 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTT 582 0.294316952049599 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCT 533 0.2695376897636362 RNA PCR Primer, Index 33 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCT 421 0.21289937596714975 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCG 417 0.21087657904584667 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGC 390 0.19722269982705085 No Hit GAATCTATCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTC 378 0.19115430906314163 RNA PCR Primer, Index 33 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCTGC 371 0.18761441445086122 RNA PCR Primer, Index 33 (95% over 24bp) GAATGATCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTC 366 0.18508591829923235 No Hit GAATCTATCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTT 232 0.11732222143557897 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTT 215 0.10872533452004086 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 201 0.10164554529548005 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05410981764485755 0.0 2 0.0 0.0 0.0 0.500136538792188 0.0 3 0.0 0.0 0.0 0.6073447756212516 0.0 4 0.0 0.0 0.0 1.113044005947023 0.0 5 0.0 0.0 0.0 2.931032738968171 0.0 6 0.0 0.0 0.0 3.2936190871117494 0.0 7 0.0 0.0 0.0 3.788192934370354 0.0 8 0.0 0.0 0.0 4.539156291404124 0.0 9 0.0 0.0 0.0 4.767226644281047 0.0 10 0.0 0.0 0.0 6.597352158830014 0.0 11 0.0 0.0 0.0 7.097994396852528 0.0 12 0.0 0.0 0.0 8.804729299202007 0.0 13 0.0 0.0 0.0 9.061118808977172 0.0 14 0.0 0.0 0.0 9.185015120406987 0.0 15 0.0 0.0 0.0 9.417636766356841 0.0 16 0.0 0.0 0.0 9.699816936878623 0.0 17 0.0 0.0 0.0 9.994639588158547 0.0 18 0.0 0.0 0.0 10.340537861701375 0.0 19 0.0 0.0 0.0 10.556977132280805 0.0 20 0.0 0.0 0.0 10.784541785927402 0.0 21 0.0 0.0 0.0 11.085432827971236 0.0 22 0.0 0.0 0.0 11.390875163088001 0.0 23 0.0 0.0 0.0 11.677606626682714 0.0 24 0.0 0.0 0.0 11.896068694183448 0.0 25 0.0 0.0 0.0 12.08216601094333 0.0 26 0.0 0.0 0.0 12.283434304612989 0.0 27 0.0 0.0 0.0 12.513021755180889 0.0 28 0.0 0.0 0.0 12.720358439614454 0.0 29 0.0 0.0 0.0 12.965622566322454 0.0 30 0.0 0.0 0.0 13.277133292203128 0.0 31 0.0 0.0 0.0 13.520880321220151 0.0 32 0.0 0.0 0.0 13.779798327146946 0.0 33 0.0 0.0 0.0 13.999271793108331 0.0 34 0.0 0.0 0.0 14.272855076714574 0.0 35 0.0 0.0 0.0 14.54239276647821 0.0 36 0.0 0.0 0.0 14.789679690107512 0.0 37 0.0 0.0 0.0 15.065285770635057 0.0 38 0.0 0.0 0.0 15.397024465728764 0.0 39 0.0 0.0 0.0 15.932559950643755 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAAAG 20 7.019105E-4 45.000004 2 GTCTAAT 20 7.019105E-4 45.000004 33 TACAGCG 20 7.019105E-4 45.000004 1 TAGGCGA 35 1.2051169E-7 45.0 6 GGCACCG 60 0.0 44.999996 8 TACGGCT 210 0.0 43.92857 7 TACGGGA 120 0.0 43.124996 4 GAATGAC 65 0.0 41.538464 1 GTAGGGC 60 3.6379788E-12 41.249996 4 AGGCGAT 60 3.6379788E-12 41.249996 7 ACGGCTG 290 0.0 41.120693 8 CGTTTTT 575 0.0 41.086956 1 TGATACC 285 0.0 41.05263 4 ATACGGC 275 0.0 40.909092 6 TAAGGAT 50 1.0713848E-9 40.5 5 CGACGGT 45 1.9144863E-8 40.0 28 AGCGACT 45 1.9144863E-8 40.0 19 CACAACG 45 1.9144863E-8 40.0 12 GCGATTT 40 3.4388904E-7 39.375004 9 CGGCTGT 305 0.0 39.098362 9 >>END_MODULE