##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936356.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 167425 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.9495893683739 33.0 31.0 34.0 30.0 34.0 2 32.08325518889055 33.0 31.0 34.0 30.0 34.0 3 31.985276989696878 33.0 31.0 34.0 30.0 34.0 4 35.737243541884425 37.0 35.0 37.0 35.0 37.0 5 35.80816484993281 37.0 35.0 37.0 35.0 37.0 6 35.78613110347917 37.0 35.0 37.0 35.0 37.0 7 26.79835150067194 35.0 10.0 37.0 0.0 37.0 8 31.131366283410483 35.0 19.0 37.0 17.0 37.0 9 35.91466029565477 39.0 32.0 39.0 32.0 39.0 10 36.59845303867403 37.0 35.0 39.0 32.0 39.0 11 36.95954009257877 39.0 37.0 39.0 33.0 39.0 12 37.032271166193816 39.0 37.0 39.0 34.0 39.0 13 37.032211437957294 39.0 37.0 39.0 33.0 39.0 14 38.18522920710766 40.0 37.0 41.0 33.0 41.0 15 38.28517246528296 40.0 37.0 41.0 34.0 41.0 16 38.209437061370764 40.0 37.0 41.0 34.0 41.0 17 38.09696281917277 40.0 37.0 41.0 33.0 41.0 18 38.029410183664325 40.0 37.0 41.0 33.0 41.0 19 37.95881738091683 40.0 37.0 41.0 33.0 41.0 20 38.0298521726146 40.0 37.0 41.0 34.0 41.0 21 37.990407645214276 40.0 37.0 41.0 33.0 41.0 22 37.96321935194863 40.0 37.0 41.0 33.0 41.0 23 37.925333731521576 40.0 37.0 41.0 33.0 41.0 24 37.87279080185157 40.0 36.0 41.0 33.0 41.0 25 37.79262356278931 40.0 36.0 41.0 33.0 41.0 26 37.69542183067045 40.0 36.0 41.0 33.0 41.0 27 37.59124384052561 40.0 36.0 41.0 33.0 41.0 28 37.54573092429446 40.0 36.0 41.0 33.0 41.0 29 37.527961773928624 40.0 36.0 41.0 33.0 41.0 30 37.44911452889353 40.0 36.0 41.0 33.0 41.0 31 37.30401075108257 39.0 36.0 41.0 32.0 41.0 32 37.17446020606241 39.0 35.0 41.0 32.0 41.0 33 37.10126325220248 39.0 35.0 41.0 31.0 41.0 34 36.99329251903838 39.0 35.0 41.0 31.0 41.0 35 36.95105868299238 39.0 35.0 41.0 31.0 41.0 36 36.81577422726594 39.0 35.0 41.0 31.0 41.0 37 36.77042257727341 39.0 35.0 41.0 31.0 41.0 38 36.65085859340003 39.0 35.0 41.0 30.0 41.0 39 36.61653874869344 39.0 35.0 41.0 30.0 41.0 40 36.47490518142452 39.0 35.0 40.0 30.0 41.0 41 36.42596983724056 39.0 35.0 40.0 30.0 41.0 42 36.333850978049874 39.0 35.0 40.0 30.0 41.0 43 36.31355532327908 39.0 35.0 40.0 30.0 41.0 44 36.12493355233687 39.0 35.0 40.0 29.0 41.0 45 36.03245035090339 38.0 35.0 40.0 29.0 41.0 46 35.88022696729879 38.0 35.0 40.0 29.0 41.0 47 35.729216066895624 38.0 35.0 40.0 28.0 41.0 48 35.66785127669105 38.0 35.0 40.0 28.0 41.0 49 35.46076153501568 38.0 34.0 40.0 27.0 41.0 50 35.2672181573839 38.0 34.0 40.0 26.0 41.0 51 33.0295893683739 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 10.0 10 9.0 11 8.0 12 6.0 13 7.0 14 5.0 15 6.0 16 11.0 17 26.0 18 50.0 19 80.0 20 155.0 21 254.0 22 400.0 23 565.0 24 799.0 25 1090.0 26 1419.0 27 1720.0 28 2050.0 29 2570.0 30 3186.0 31 4226.0 32 5502.0 33 7693.0 34 11693.0 35 14508.0 36 15948.0 37 25321.0 38 32690.0 39 35407.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.193370165745854 22.057040465880245 24.229953710616694 12.519635657757206 2 30.822756458115574 25.17545169478871 25.731521576825443 18.27027027027027 3 30.838883081977002 24.916231148275347 27.604001791847093 16.640883977900554 4 28.659997013588175 25.75302374197402 26.445274003285054 19.141705241152753 5 25.007615350156787 30.77557115126176 24.298043900253845 19.91876959832761 6 25.586979244437806 34.77437658653128 25.094818575481558 14.54382559354935 7 61.72853516499926 27.793937583992832 6.3138718829326566 4.163655368075258 8 83.1064655816037 5.276989696879199 7.308944303419442 4.307600418097655 9 76.87621322980439 7.672689263849485 9.542780349410183 5.908317156935942 10 40.820068687472 28.615798118560548 17.00582350306107 13.558309690906375 11 28.545318799462443 28.630730177691504 24.993280573391072 17.83067044945498 12 26.852620576377483 24.361953113334327 29.022547409287743 19.762878901000448 13 23.53770344930566 25.076302822159175 31.556816484993284 19.829177243541885 14 19.129759593847993 28.673137225623414 30.71464835000747 21.482454830521128 15 18.346722413020757 28.324324324324323 33.935194863371656 19.39375839928326 16 21.340898909959684 27.84709571449903 30.44228759145886 20.369717784082425 17 21.13722562341347 27.053904733462748 28.573391070628638 23.235478572495147 18 22.229655069434077 26.90936240107511 30.437509332536955 20.42347319695386 19 22.734358668060324 28.197103180528593 27.700761535015676 21.3677766163954 20 24.222786322233837 27.77124085411378 28.237121098999552 19.76885172465283 21 24.219799910407644 27.578318650141853 28.72987905032104 19.47200238912946 22 22.623264148126026 25.147379423622517 29.490816783634465 22.738539644616992 23 21.729132447364492 25.67477975212782 29.57802000895924 23.018067791548454 24 21.77452590712259 25.41615648797969 30.215917575033597 22.59340002986412 25 21.4788711363297 27.30297147976706 28.619381812751975 22.59877557115126 26 20.489174257130056 28.337464536359562 28.12065103777811 23.05271016873227 27 19.93071524563237 28.858294758847247 28.002986411826193 23.208003583694193 28 18.97685530834702 28.275347170374793 30.588024488576977 22.15977303270121 29 19.995221741078094 26.183067044945496 29.315215768254443 24.506495445721967 30 20.577572047185306 27.562789308645662 28.480215021651485 23.379423622517546 31 22.272659399731225 27.854263102881887 27.58130506196805 22.291772435418842 32 23.07301776915037 28.48499328057339 25.794833507540687 22.647155442735553 33 21.55233686725399 28.842765417351053 26.16634313871883 23.438554576676125 34 20.8278333582201 27.001343885321788 28.820068687472002 23.350754068986113 35 20.87979692399582 26.30252351799313 27.981484246677617 24.836195311333434 36 21.519486337165894 27.672689263849488 27.4397491414066 23.36807525757802 37 20.650440495744363 28.50948185754816 28.660594295953413 22.17948335075407 38 20.795580110497237 29.852172614603557 26.54920113483649 22.803046140062715 39 21.53859937285352 27.151859041361803 28.450948185754815 22.858593400029864 40 22.588024488576973 25.936986710467373 28.52142750485292 22.95356129610273 41 20.669553531431983 25.872480215021653 28.272958040913842 25.18500821263252 42 21.062565327758698 25.319396744811108 27.872181573839033 25.74585635359116 43 21.953710616694043 25.395848887561595 27.948036434224278 24.702404061520085 44 19.86322233836046 27.268329102583245 27.202628042407046 25.665820516649244 45 20.744213827086753 26.490070180677915 27.154845453187992 25.610870539047337 46 21.99671494699119 26.92130804837987 27.94385545766761 23.138121546961326 47 19.74257130058235 26.09765566671644 29.969837240555474 24.189935792145736 48 20.185754815589068 25.48066298342541 29.380319546065405 24.953262654920113 49 20.363744960430044 24.84694639390772 30.272062117365984 24.51724652829625 50 20.076452142750487 24.887561594743914 30.019411676870238 25.01657458563536 51 19.825593549350458 25.049425115723455 28.167836344631926 26.957144990294164 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 170.0 2 266.0 3 429.5 4 593.0 5 433.5 6 274.0 7 244.0 8 214.0 9 214.0 10 214.0 11 227.5 12 241.0 13 264.0 14 287.0 15 286.0 16 285.0 17 301.5 18 318.0 19 379.5 20 441.0 21 514.0 22 587.0 23 800.5 24 1014.0 25 1242.5 26 1640.5 27 1810.0 28 2277.0 29 2744.0 30 3147.0 31 3550.0 32 3990.0 33 4430.0 34 4856.0 35 5282.0 36 5893.5 37 6505.0 38 7020.5 39 7536.0 40 8283.0 41 9030.0 42 10289.0 43 11548.0 44 12269.5 45 12991.0 46 14085.0 47 15179.0 48 15571.0 49 15963.0 50 14982.0 51 14001.0 52 12393.5 53 10786.0 54 9781.5 55 8777.0 56 8013.0 57 7249.0 58 6771.5 59 6294.0 60 5697.5 61 5101.0 62 4562.5 63 4024.0 64 3475.5 65 2927.0 66 2424.0 67 1921.0 68 1585.5 69 1250.0 70 1083.0 71 916.0 72 754.0 73 592.0 74 464.5 75 258.0 76 179.0 77 153.5 78 128.0 79 88.0 80 48.0 81 30.0 82 12.0 83 14.5 84 17.0 85 11.0 86 5.0 87 6.5 88 8.0 89 6.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 167425.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.14603553830074 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17344033134869 32.38226071375242 2 9.659590991457415 8.91503658354487 3 5.20062127879886 7.199641630580857 4 3.4610406419880926 6.388532178587428 5 2.593838985244629 5.984769299686427 6 1.947967900595392 5.393459758100642 7 1.6166192078695314 5.222039719277288 8 1.1894900336526015 4.391219949230999 9 1.0548796272327208 4.381066149021951 >10 3.0779187160238157 18.270867552635508 >50 0.014237639140564329 0.398387337613857 >100 0.010354646647683147 1.0727191279677468 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 284 0.16962819172763924 No Hit GCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 277 0.16544721517097208 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 269 0.16066895624906674 No Hit CCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 256 0.15290428550097057 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCG 242 0.14454233238763625 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGC 182 0.10870539047334628 No Hit CTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGCT 171 0.10213528445572645 Illumina Single End Adapter 1 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16186352097954307 0.0 2 0.0 0.0 0.0 0.7973719575929521 0.0 3 0.0 0.0 0.0 1.087651187098701 0.0 4 0.0 0.0 0.0 1.4292967000149321 0.0 5 0.0 0.0 0.0 2.5055995221741076 0.0 6 0.0 0.0 0.0 3.0646558160370314 0.0 7 0.0 0.0 0.0 3.561594743915186 0.0 8 0.0 0.0 0.0 4.518441093026729 0.0 9 0.0 0.0 0.0 4.8320143347767655 0.0 10 0.0 0.0 0.0 5.819919366880693 0.0 11 0.0 0.0 0.0 6.963715096311781 0.0 12 0.0 0.0 0.0 7.972525011199044 0.0 13 0.0 0.0 0.0 8.398984619979094 0.0 14 0.0 0.0 0.0 8.572196505898164 0.0 15 0.0 0.0 0.0 8.849335523368673 0.0 16 0.0 0.0 0.0 9.458563535911603 0.0 17 0.0 0.0 0.0 10.163356726892639 0.0 18 0.0 0.0 0.0 10.899805883231297 0.0 19 0.0 0.0 0.0 11.371658951769449 0.0 20 0.0 0.0 0.0 11.836344631924742 0.0 21 0.0 0.0 0.0 12.401373749440047 0.0 22 0.0 0.0 0.0 12.995669702852023 0.0 23 0.0 0.0 0.0 13.572047185306854 0.0 24 0.0 0.0 0.0 14.063610571897865 0.0 25 0.0 0.0 0.0 14.476929968642676 0.0 26 0.0 0.0 0.0 14.847245035090339 0.0 27 0.0 0.0 0.0 15.224130207555621 0.0 28 0.0 0.0 0.0 15.627893086456622 0.0 29 0.0 0.0 0.0 16.057339107062862 0.0 30 0.0 0.0 0.0 16.497536210243393 0.0 31 0.0 0.0 0.0 16.942511572345825 0.0 32 0.0 0.0 0.0 17.355830969090636 0.0 33 0.0 0.0 0.0 17.779901448409735 0.0 34 0.0 0.0 0.0 18.184261609675975 0.0 35 0.0 0.0 0.0 18.60295654770793 0.0 36 0.0 0.0 0.0 18.963117813946543 0.0 37 0.0 0.0 0.0 19.318500821263253 0.0 38 0.0 0.0 0.0 19.72644467672092 0.0 39 0.0 0.0 0.0 20.13319396744811 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGG 20 7.016009E-4 45.0 3 GGCACCG 40 6.7557266E-9 45.0 8 CACGCCG 20 7.016009E-4 45.0 26 AGGCGAT 40 6.7557266E-9 45.0 7 GGCCCCT 20 7.016009E-4 45.0 8 TCGGCAT 20 7.016009E-4 45.0 45 GGCGATA 45 3.8016879E-10 45.0 8 CGGTAGT 20 7.016009E-4 45.0 12 CTTAGTC 25 3.8764912E-5 45.0 40 GTACGTA 20 7.016009E-4 45.0 22 TACGTAG 20 7.016009E-4 45.0 23 CGTTTTT 165 0.0 40.90909 1 ATAGCGG 45 1.911394E-8 40.0 2 AAGGATC 45 1.911394E-8 40.0 6 TTAGCGG 40 3.4346704E-7 39.375 2 CTATCTC 75 0.0 39.0 5 TCGATGG 35 6.2163617E-6 38.57143 2 ATACTCT 35 6.2163617E-6 38.57143 27 GCGGGTG 35 6.2163617E-6 38.57143 5 AGTACGG 35 6.2163617E-6 38.57143 2 >>END_MODULE