SRR2936355.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936355.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	66335
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	177	0.26682746664656665	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	165	0.2487374689078164	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG	158	0.2381849702268787	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	155	0.23366247079219116	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	144	0.21707997286500336	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT	96	0.14471998191000227	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC	92	0.13868998266375218	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATCAA	25	3.8510385E-5	45.000004	13
CAACGCA	25	3.8510385E-5	45.000004	17
TTACTGG	25	3.8510385E-5	45.000004	40
AGGGTAT	25	3.8510385E-5	45.000004	6
ACGGGCT	25	3.8510385E-5	45.000004	5
ATCAACG	25	3.8510385E-5	45.000004	15
AACGCAA	25	3.8510385E-5	45.000004	18
CGCACTT	25	3.8510385E-5	45.000004	35
ACCCGCA	25	3.8510385E-5	45.000004	32
ATCGGGG	25	3.8510385E-5	45.000004	4
CGCAAGC	25	3.8510385E-5	45.000004	20
GCACTTA	25	3.8510385E-5	45.000004	36
CCGCACT	25	3.8510385E-5	45.000004	34
TCAACGC	25	3.8510385E-5	45.000004	16
CCCGCAC	25	3.8510385E-5	45.000004	33
CACTTAC	25	3.8510385E-5	45.000004	37
TCTGCAT	20	6.9852435E-4	45.0	17
CAGCGGT	20	6.9852435E-4	45.0	11
TCGCATC	20	6.9852435E-4	45.0	38
CATGCAC	20	6.9852435E-4	45.0	45