SRR2936350.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936350.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	153222
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	251	0.16381459581522234	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCG	174	0.11356071582409838	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGC	172	0.11225542023991332	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	25	3.87494E-5	45.000004	4
TACGGCT	25	3.87494E-5	45.000004	7
TCGATCA	25	3.87494E-5	45.000004	17
CTCGATC	25	3.87494E-5	45.000004	16
ACAAGCG	25	3.87494E-5	45.000004	14
ATACTCG	20	7.014137E-4	45.0	44
TTAAGTC	20	7.014137E-4	45.0	41
TACTCGC	20	7.014137E-4	45.0	45
CAAGCGA	20	7.014137E-4	45.0	15
GTCTTGC	20	7.014137E-4	45.0	45
ATTTCCG	65	0.0	41.53846	32
TAGTTGG	45	1.909575E-8	40.0	2
CGGGAAT	45	1.909575E-8	40.0	6
GACGAGA	40	3.4321238E-7	39.375	13
CTCGTAA	35	6.2129075E-6	38.57143	33
CGGTTCG	35	6.2129075E-6	38.57143	29
TTTCCGC	70	0.0	38.57143	33
TCGTAAC	35	6.2129075E-6	38.57143	34
CGTAACC	35	6.2129075E-6	38.57143	35
GTAAGGC	35	6.2129075E-6	38.57143	4